scaffold5789 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold5789 |
2 |
947 |
+ |
TNA1_NA |
LTR/Gypsy |
| scaffold5789 |
1263 |
1282 |
+ |
(TGA)n |
Simple_repeat |
| scaffold5789 |
1635 |
1672 |
+ |
(TATGT)n |
Simple_repeat |
| scaffold5789 |
1670 |
1745 |
+ |
A-rich |
Low_complexity |
| scaffold5789 |
1760 |
2257 |
- |
PL472 |
Unspecified |
| scaffold5789 |
1828 |
2424 |
+ |
PL936 |
Unspecified |
| scaffold5789 |
2084 |
2603 |
- |
RS1154 |
Unspecified |
| scaffold5789 |
3593 |
5093 |
- |
RS30 |
Unspecified |
| scaffold5789 |
5404 |
6008 |
+ |
PL123 |
Unspecified |
| scaffold5789 |
6057 |
6115 |
- |
hAT-N4_STu |
DNA/hAT-Ac |
| scaffold5789 |
6143 |
6218 |
+ |
G-rich |
Low_complexity |
| scaffold5789 |
6543 |
6697 |
- |
RS1888 |
Unspecified |
| scaffold5789 |
6855 |
7097 |
- |
RS4 |
Unspecified |
| scaffold5789 |
7369 |
7426 |
+ |
(TTA)n |
Simple_repeat |
| scaffold5789 |
7666 |
7761 |
+ |
(ATTTT)n |
Simple_repeat |
| scaffold5789 |
8505 |
8629 |
+ |
Copia-2_SL-LTR |
LTR/Copia |
| scaffold5789 |
9142 |
9320 |
+ |
PL69 |
Unspecified |
| scaffold5789 |
10379 |
10430 |
+ |
(TATTAAC)n |
Simple_repeat |
| scaffold5789 |
10521 |
10701 |
+ |
RS14361 |
Unspecified |
| scaffold5789 |
10866 |
10896 |
+ |
(TAA)n |
Simple_repeat |
| scaffold5789 |
10949 |
11014 |
+ |
A-rich |
Low_complexity |
| scaffold5789 |
11154 |
11172 |
+ |
(A)n |
Simple_repeat |
| scaffold5789 |
11332 |
11390 |
+ |
(TAATTT)n |
Simple_repeat |
| scaffold5789 |
11642 |
11781 |
+ |
RS16397 |
Unspecified |
| scaffold5789 |
11916 |
11952 |
+ |
(A)n |
Simple_repeat |
| scaffold5789 |
13787 |
13828 |
+ |
(TTTC)n |
Simple_repeat |
| scaffold5789 |
13870 |
13944 |
+ |
(TT)n |
Simple_repeat |
| scaffold5789 |
13961 |
14137 |
+ |
RS5 |
Unspecified |
| scaffold5789 |
14240 |
14501 |
+ |
RS356 |
Unspecified |
| scaffold5789 |
14639 |
14749 |
- |
COPMET_LTR |
LTR/Copia |
| scaffold5789 |
14780 |
14893 |
+ |
RS6862 |
Unspecified |
| scaffold5789 |
15355 |
15391 |
+ |
(T)n |
Simple_repeat |
| scaffold5789 |
15449 |
15622 |
- |
PL21 |
Unspecified |
| scaffold5789 |
17540 |
17563 |
+ |
(A)n |
Simple_repeat |
| scaffold5789 |
17749 |
17781 |
+ |
(GGT)n |
Simple_repeat |
| scaffold5789 |
18049 |
18105 |
+ |
G-rich |
Low_complexity |
| scaffold5789 |
18509 |
18865 |
+ |
RS14072 |
Unspecified |
| scaffold5789 |
19333 |
19382 |
+ |
(GTCCC)n |
Simple_repeat |
| scaffold5789 |
20406 |
20509 |
+ |
RS16348 |
Unspecified |
| scaffold5789 |
21493 |
21784 |
+ |
RS16713 |
Unspecified |
| scaffold5789 |
23098 |
23198 |
+ |
RS12894 |
Unspecified |
| scaffold5789 |
24776 |
24848 |
+ |
(AAT)n |
Simple_repeat |
| scaffold5789 |
25022 |
25146 |
+ |
RS2544 |
Unspecified |
| scaffold5789 |
25457 |
25474 |
+ |
(C)n |
Simple_repeat |
| scaffold5789 |
25847 |
26053 |
- |
RS5137 |
Unspecified |
| scaffold5789 |
26128 |
26331 |
- |
RS2809 |
Unspecified |
| scaffold5789 |
26455 |
26485 |
+ |
(AAT)n |
Simple_repeat |
| scaffold5789 |
26738 |
26792 |
+ |
(TTA)n |
Simple_repeat |
| scaffold5789 |
26853 |
26911 |
+ |
(TACA)n |
Simple_repeat |
| scaffold5789 |
27005 |
27059 |
+ |
HAT-3N1_Mad |
DNA/hAT-Tip100 |
| scaffold5789 |
28426 |
28492 |
+ |
(AGTAGA)n |
Simple_repeat |
| scaffold5789 |
28997 |
29354 |
+ |
RS14072 |
Unspecified |
| scaffold5789 |
30456 |
30559 |
+ |
RS16348 |
Unspecified |
| scaffold5789 |
30961 |
31252 |
+ |
RS16713 |
Unspecified |
| scaffold5789 |
32432 |
32827 |
+ |
RS14080 |
Unspecified |
| scaffold5789 |
32802 |
32909 |
+ |
RS17886 |
Unspecified |
| scaffold5789 |
33129 |
33433 |
+ |
RS12561 |
Unspecified |
| scaffold5789 |
33335 |
33447 |
+ |
RS16743 |
Unspecified |
| scaffold5789 |
33929 |
33969 |
+ |
(ACCATA)n |
Simple_repeat |
| scaffold5789 |
34068 |
34133 |
+ |
(CCCGA)n |
Simple_repeat |
| scaffold5789 |
34249 |
34277 |
+ |
(TTTGC)n |
Simple_repeat |
| scaffold5789 |
35425 |
36042 |
+ |
L1-1_EPa |
LINE/L1 |
| scaffold5789 |
36125 |
36413 |
+ |
RS15044 |
Unspecified |
| scaffold5789 |
36633 |
36962 |
- |
Gypsy-7_Mad-I |
LTR/Gypsy |
| scaffold5789 |
37041 |
37695 |
- |
Gypsy2-VV_I-int |
LTR/Gypsy |
| scaffold5789 |
38984 |
39084 |
+ |
RS12894 |
Unspecified |
| scaffold5789 |
42355 |
42459 |
+ |
RS17544 |
Unspecified |
| scaffold5789 |
42816 |
42942 |
+ |
RS15963 |
Unspecified |
| scaffold5789 |
43072 |
43215 |
+ |
RS15972 |
Unspecified |
| scaffold5789 |
43221 |
43322 |
+ |
RS16624 |
Unspecified |
| scaffold5789 |
43617 |
43740 |
+ |
RS17944 |
Unspecified |
| scaffold5789 |
44792 |
44832 |
+ |
(AACAA)n |
Simple_repeat |
| scaffold5789 |
45064 |
45095 |
+ |
(AGA)n |
Simple_repeat |
| scaffold5789 |
46812 |
46911 |
+ |
RS13757 |
Unspecified |
| scaffold5789 |
48491 |
48512 |
+ |
(A)n |
Simple_repeat |
| scaffold5789 |
49001 |
49039 |
+ |
GA-rich |
Low_complexity |
| scaffold5789 |
49102 |
49129 |
+ |
(ATAA)n |
Simple_repeat |
| scaffold5789 |
49308 |
49470 |
+ |
PL3 |
Unspecified |
| scaffold5789 |
49525 |
49569 |
+ |
A-rich |
Low_complexity |
| scaffold5789 |
49747 |
49891 |
+ |
(ATTGG)n |
Simple_repeat |
| scaffold5789 |
49969 |
50242 |
+ |
PL3 |
Unspecified |
| scaffold5789 |
50272 |
50513 |
- |
RS4 |
Unspecified |
| scaffold5789 |
50608 |
50786 |
- |
RS17573 |
Unspecified |
| scaffold5789 |
51064 |
51154 |
- |
RS5179 |
Unspecified |
| scaffold5789 |
51154 |
51415 |
- |
RS185 |
Unspecified |
| scaffold5789 |
51506 |
51577 |
+ |
(TTC)n |
Simple_repeat |
| scaffold5789 |
51629 |
51669 |
+ |
(CCA)n |
Simple_repeat |
| scaffold5789 |
51701 |
52058 |
+ |
RS2886 |
Unspecified |
| scaffold5789 |
52212 |
52344 |
+ |
RS1599 |
Unspecified |
| scaffold5789 |
56009 |
56047 |
+ |
(ATAA)n |
Simple_repeat |
| scaffold5789 |
58864 |
58907 |
+ |
(ACA)n |
Simple_repeat |
| scaffold5789 |
58933 |
59151 |
- |
RS8881 |
Unspecified |
| scaffold5789 |
60236 |
60442 |
+ |
RS8 |
Unspecified |
| scaffold5789 |
60488 |
60565 |
+ |
LTR-7_Mad-LTR |
LTR |
| scaffold5789 |
62260 |
62288 |
+ |
A-rich |
Low_complexity |
| scaffold5789 |
63488 |
63529 |
+ |
(ATTGAAG)n |
Simple_repeat |
| scaffold5789 |
63596 |
63623 |
+ |
(T)n |
Simple_repeat |
| scaffold5789 |
64125 |
64214 |
+ |
(TTAT)n |
Simple_repeat |
| scaffold5789 |
64404 |
64445 |
+ |
(ATTGAAG)n |
Simple_repeat |
| scaffold5789 |
64512 |
64539 |
+ |
(T)n |
Simple_repeat |
| scaffold5789 |
65041 |
65130 |
+ |
(TTAT)n |
Simple_repeat |
| scaffold5789 |
65592 |
65679 |
+ |
(TTTAAC)n |
Simple_repeat |
| scaffold5789 |
65965 |
66019 |
+ |
RS17514 |
Unspecified |
| scaffold5789 |
65972 |
66186 |
- |
RS4 |
Unspecified |
| scaffold5789 |
67711 |
67780 |
+ |
(AATTTT)n |
Simple_repeat |
| scaffold5789 |
68423 |
68446 |
+ |
(TTGT)n |
Simple_repeat |
| scaffold5789 |
70782 |
70820 |
+ |
(TTTAGT)n |
Simple_repeat |
| scaffold5789 |
71745 |
72289 |
- |
PL782 |
Unspecified |
| scaffold5789 |
72885 |
72912 |
+ |
(T)n |
Simple_repeat |
| scaffold5789 |
73133 |
73162 |
+ |
(T)n |
Simple_repeat |
| scaffold5789 |
74238 |
74328 |
+ |
(TTCTTAT)n |
Simple_repeat |