scaffold5794 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold5794 |
35 |
206 |
+ |
RS6249 |
Unspecified |
| scaffold5794 |
243 |
451 |
+ |
RS79 |
Unspecified |
| scaffold5794 |
551 |
644 |
- |
RS41 |
Unspecified |
| scaffold5794 |
637 |
735 |
- |
RS41 |
Unspecified |
| scaffold5794 |
1192 |
1228 |
+ |
A-rich |
Low_complexity |
| scaffold5794 |
2856 |
3329 |
- |
PL271 |
Unspecified |
| scaffold5794 |
3438 |
3482 |
+ |
(CCGGAT)n |
Simple_repeat |
| scaffold5794 |
3535 |
3588 |
+ |
(GATCCG)n |
Simple_repeat |
| scaffold5794 |
3854 |
3912 |
+ |
(TAGTTTT)n |
Simple_repeat |
| scaffold5794 |
8290 |
8358 |
+ |
(TCAAC)n |
Simple_repeat |
| scaffold5794 |
8412 |
8456 |
+ |
GA-rich |
Low_complexity |
| scaffold5794 |
8558 |
8584 |
+ |
(TCA)n |
Simple_repeat |
| scaffold5794 |
8639 |
8682 |
+ |
(TTTTTA)n |
Simple_repeat |
| scaffold5794 |
14470 |
14714 |
- |
RS4 |
Unspecified |
| scaffold5794 |
15236 |
15252 |
+ |
(T)n |
Simple_repeat |
| scaffold5794 |
15260 |
15491 |
- |
RS376 |
Unspecified |
| scaffold5794 |
16644 |
16688 |
+ |
(AAAATA)n |
Simple_repeat |
| scaffold5794 |
16799 |
16826 |
+ |
(T)n |
Simple_repeat |
| scaffold5794 |
16962 |
17016 |
+ |
(TTTTAA)n |
Simple_repeat |
| scaffold5794 |
17237 |
17335 |
+ |
RS2993 |
Unspecified |
| scaffold5794 |
17945 |
18490 |
+ |
RS21 |
Unspecified |
| scaffold5794 |
18518 |
18568 |
- |
RS2439 |
Unspecified |
| scaffold5794 |
18518 |
18585 |
+ |
RS1167 |
Unspecified |
| scaffold5794 |
19400 |
19671 |
+ |
RS898 |
Unspecified |
| scaffold5794 |
20747 |
20810 |
+ |
(AGCTCG)n |
Simple_repeat |
| scaffold5794 |
20777 |
20838 |
+ |
(CGAGCC)n |
Simple_repeat |
| scaffold5794 |
21972 |
21992 |
+ |
(T)n |
Simple_repeat |
| scaffold5794 |
22953 |
23015 |
- |
RS18071 |
Unspecified |
| scaffold5794 |
23034 |
23262 |
+ |
RS15131 |
Unspecified |
| scaffold5794 |
23291 |
23341 |
- |
RS18071 |
Unspecified |
| scaffold5794 |
23459 |
23516 |
+ |
RS1180 |
Unspecified |
| scaffold5794 |
24335 |
24569 |
- |
RS17600 |
Unspecified |
| scaffold5794 |
25604 |
25636 |
+ |
(TTATAA)n |
Simple_repeat |
| scaffold5794 |
27215 |
27269 |
+ |
GA-rich |
Low_complexity |
| scaffold5794 |
27340 |
27471 |
+ |
RS15470 |
Unspecified |
| scaffold5794 |
27343 |
27457 |
+ |
RS17326 |
Unspecified |
| scaffold5794 |
27456 |
27565 |
- |
RS1042 |
Unspecified |
| scaffold5794 |
27480 |
27757 |
- |
RS1042 |
Unspecified |
| scaffold5794 |
27613 |
27816 |
- |
RS1042 |
Unspecified |
| scaffold5794 |
27823 |
27966 |
+ |
RS84 |
Unspecified |
| scaffold5794 |
28810 |
28859 |
+ |
(TTTTA)n |
Simple_repeat |
| scaffold5794 |
29907 |
29932 |
+ |
(A)n |
Simple_repeat |
| scaffold5794 |
30450 |
30532 |
+ |
(AAT)n |
Simple_repeat |
| scaffold5794 |
30672 |
30996 |
- |
RS1716 |
Unspecified |
| scaffold5794 |
30925 |
31013 |
- |
RS1781 |
Unspecified |
| scaffold5794 |
31492 |
31522 |
+ |
A-rich |
Low_complexity |
| scaffold5794 |
31772 |
31811 |
+ |
(TTG)n |
Simple_repeat |
| scaffold5794 |
32400 |
32488 |
- |
RS15131 |
Unspecified |
| scaffold5794 |
32482 |
32731 |
- |
RS1 |
Unspecified |
| scaffold5794 |
32888 |
34427 |
- |
COP3_I_MT-int |
LTR/Copia |
| scaffold5794 |
34557 |
36248 |
- |
COP3_I_MT-int |
LTR/Copia |
| scaffold5794 |
36457 |
37178 |
- |
COP3_I_MT-int |
LTR/Copia |
| scaffold5794 |
37332 |
37377 |
+ |
RS1 |
Unspecified |
| scaffold5794 |
37377 |
37515 |
- |
RS15131 |
Unspecified |
| scaffold5794 |
38648 |
38907 |
+ |
RS1 |
Unspecified |
| scaffold5794 |
40849 |
40879 |
+ |
A-rich |
Low_complexity |
| scaffold5794 |
41184 |
41447 |
+ |
RS47 |
Unspecified |
| scaffold5794 |
41301 |
41465 |
- |
RS16831 |
Unspecified |
| scaffold5794 |
42173 |
42270 |
- |
RS746 |
Unspecified |
| scaffold5794 |
42703 |
42732 |
+ |
(CGAGC)n |
Simple_repeat |
| scaffold5794 |
42858 |
42880 |
+ |
(TACA)n |
Simple_repeat |
| scaffold5794 |
43957 |
44148 |
- |
RS17860 |
Unspecified |
| scaffold5794 |
44117 |
44175 |
- |
RS2157 |
Unspecified |
| scaffold5794 |
45066 |
45087 |
+ |
(AGA)n |
Simple_repeat |
| scaffold5794 |
45656 |
45697 |
+ |
(ACTCGTA)n |
Simple_repeat |
| scaffold5794 |
46597 |
46619 |
+ |
(AC)n |
Simple_repeat |
| scaffold5794 |
48372 |
48408 |
+ |
(CTGAA)n |
Simple_repeat |
| scaffold5794 |
50743 |
50761 |
+ |
(T)n |
Simple_repeat |
| scaffold5794 |
52138 |
52211 |
+ |
A-rich |
Low_complexity |
| scaffold5794 |
55103 |
55162 |
+ |
RS11615 |
Unspecified |
| scaffold5794 |
56823 |
56862 |
+ |
(A)n |
Simple_repeat |
| scaffold5794 |
57616 |
57650 |
+ |
G-rich |
Low_complexity |
| scaffold5794 |
58716 |
58753 |
+ |
(ATCAACA)n |
Simple_repeat |
| scaffold5794 |
59411 |
59428 |
+ |
(A)n |
Simple_repeat |
| scaffold5794 |
59487 |
61042 |
+ |
MuDR_A_B |
MuDR_A_B(TransposonPSI) |
| scaffold5794 |
59618 |
61042 |
+ |
MuDR_A_B |
MuDR_A_B(TransposonPSI) |
| scaffold5794 |
61315 |
61356 |
+ |
(GTCCACC)n |
Simple_repeat |
| scaffold5794 |
61888 |
62315 |
- |
RS1281 |
Unspecified |
| scaffold5794 |
62689 |
62915 |
+ |
RS5141 |
Unspecified |
| scaffold5794 |
62818 |
62986 |
+ |
RS913 |
Unspecified |
| scaffold5794 |
62911 |
63040 |
+ |
RS9112 |
Unspecified |
| scaffold5794 |
63155 |
63233 |
+ |
(AAT)n |
Simple_repeat |
| scaffold5794 |
63301 |
64032 |
- |
RS438 |
Unspecified |
| scaffold5794 |
64060 |
64108 |
+ |
A-rich |
Low_complexity |
| scaffold5794 |
64060 |
64436 |
+ |
A-rich |
Low_complexity |
| scaffold5794 |
64085 |
64436 |
+ |
RS8151 |
Unspecified |
| scaffold5794 |
64437 |
65038 |
- |
RS8870 |
Unspecified |
| scaffold5794 |
69885 |
70045 |
+ |
Gypsy18-VV_I-int |
LTR/Gypsy |
| scaffold5794 |
70128 |
70203 |
+ |
PEABODY_I-int |
LTR/Gypsy |
| scaffold5794 |
70719 |
70855 |
+ |
ERIKA1_TM |
LTR/Gypsy |
| scaffold5794 |
70961 |
74413 |
+ |
RIRE8B_I-int |
LTR/Gypsy |
| scaffold5794 |
70961 |
74222 |
+ |
RIRE8B_I-int |
LTR/Gypsy |
| scaffold5794 |
74187 |
74413 |
+ |
RS5141 |
Unspecified |
| scaffold5794 |
74316 |
74484 |
+ |
RS913 |
Unspecified |
| scaffold5794 |
74409 |
74538 |
+ |
RS9112 |
Unspecified |
| scaffold5794 |
74604 |
74641 |
+ |
(AACAA)n |
Simple_repeat |
| scaffold5794 |
74654 |
74699 |
+ |
(AAT)n |
Simple_repeat |