scaffold5795 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold5795 |
69 |
87 |
+ |
(TA)n |
Simple_repeat |
| scaffold5795 |
168 |
230 |
+ |
(TTGTAA)n |
Simple_repeat |
| scaffold5795 |
227 |
266 |
+ |
(TTACAA)n |
Simple_repeat |
| scaffold5795 |
337 |
964 |
- |
RS1333 |
Unspecified |
| scaffold5795 |
960 |
1270 |
+ |
RS409 |
Unspecified |
| scaffold5795 |
1585 |
1614 |
+ |
A-rich |
Low_complexity |
| scaffold5795 |
1656 |
1680 |
+ |
(TA)n |
Simple_repeat |
| scaffold5795 |
2068 |
2190 |
+ |
(TAA)n |
Simple_repeat |
| scaffold5795 |
2323 |
3582 |
+ |
RS363 |
Unspecified |
| scaffold5795 |
3060 |
3654 |
+ |
RS2292 |
Unspecified |
| scaffold5795 |
4339 |
4601 |
+ |
RS14262 |
Unspecified |
| scaffold5795 |
4582 |
4847 |
+ |
RS4577 |
Unspecified |
| scaffold5795 |
4675 |
4933 |
+ |
RS9285 |
Unspecified |
| scaffold5795 |
4764 |
5123 |
+ |
RS10454 |
Unspecified |
| scaffold5795 |
5231 |
5382 |
+ |
RS6075 |
Unspecified |
| scaffold5795 |
5261 |
6785 |
+ |
POPCOP2_I-int |
LTR/Copia |
| scaffold5795 |
5506 |
6785 |
+ |
POPCOP2_I-int |
LTR/Copia |
| scaffold5795 |
6854 |
8103 |
+ |
POPCOP2_I-int |
LTR/Copia |
| scaffold5795 |
8744 |
8907 |
+ |
POPCOP2_I-int |
LTR/Copia |
| scaffold5795 |
9056 |
9908 |
+ |
POPCOP2_I-int |
LTR/Copia |
| scaffold5795 |
10042 |
10460 |
+ |
POPCOP2_I-int |
LTR/Copia |
| scaffold5795 |
10521 |
10966 |
+ |
POPCOP2_I-int |
LTR/Copia |
| scaffold5795 |
11100 |
11930 |
+ |
POPCOP2_I-int |
LTR/Copia |
| scaffold5795 |
12023 |
12271 |
+ |
RS14262 |
Unspecified |
| scaffold5795 |
12225 |
12491 |
+ |
RS3116 |
Unspecified |
| scaffold5795 |
12342 |
12525 |
+ |
RS9285 |
Unspecified |
| scaffold5795 |
13104 |
13185 |
+ |
(AAT)n |
Simple_repeat |
| scaffold5795 |
13328 |
13354 |
+ |
(AATTG)n |
Simple_repeat |
| scaffold5795 |
16168 |
16694 |
- |
RS225 |
Unspecified |
| scaffold5795 |
16382 |
16782 |
+ |
RS166 |
Unspecified |
| scaffold5795 |
16783 |
17405 |
- |
PL219 |
Unspecified |
| scaffold5795 |
16809 |
17539 |
- |
RS530 |
Unspecified |
| scaffold5795 |
18075 |
18683 |
+ |
RS435 |
Unspecified |
| scaffold5795 |
18637 |
19484 |
+ |
RS437 |
Unspecified |
| scaffold5795 |
19396 |
19505 |
- |
PL458 |
Unspecified |
| scaffold5795 |
20400 |
20442 |
+ |
(CTTGTA)n |
Simple_repeat |
| scaffold5795 |
20823 |
20873 |
+ |
(TTTG)n |
Simple_repeat |
| scaffold5795 |
22714 |
22761 |
+ |
(TGTTAGA)n |
Simple_repeat |
| scaffold5795 |
22820 |
24143 |
+ |
RS934 |
Unspecified |
| scaffold5795 |
24971 |
25862 |
- |
RS482 |
Unspecified |
| scaffold5795 |
26025 |
26110 |
+ |
(TAC)n |
Simple_repeat |
| scaffold5795 |
26295 |
26574 |
+ |
RS12839 |
Unspecified |
| scaffold5795 |
26441 |
28457 |
+ |
RS1128 |
Unspecified |
| scaffold5795 |
27839 |
28834 |
+ |
RS2765 |
Unspecified |
| scaffold5795 |
28838 |
29125 |
+ |
RS265 |
Unspecified |
| scaffold5795 |
29491 |
29527 |
+ |
(ATTA)n |
Simple_repeat |
| scaffold5795 |
29554 |
30040 |
+ |
PL6 |
Unspecified |
| scaffold5795 |
30048 |
30607 |
- |
Copia-84_VV-LTR |
LTR/Copia |
| scaffold5795 |
30624 |
30670 |
+ |
(ATCCG)n |
Simple_repeat |
| scaffold5795 |
30988 |
31014 |
+ |
(T)n |
Simple_repeat |
| scaffold5795 |
31208 |
31269 |
+ |
(TTTAATT)n |
Simple_repeat |
| scaffold5795 |
31343 |
31415 |
+ |
(CGGAT)n |
Simple_repeat |
| scaffold5795 |
31443 |
31492 |
+ |
RS15482 |
Unspecified |
| scaffold5795 |
31508 |
31600 |
- |
Copia-61_GM-I |
LTR/Copia |
| scaffold5795 |
31635 |
32137 |
- |
RS245 |
Unspecified |
| scaffold5795 |
32739 |
33004 |
- |
RS3651 |
Unspecified |
| scaffold5795 |
33003 |
33525 |
+ |
RS676 |
Unspecified |
| scaffold5795 |
33477 |
34546 |
+ |
RS676 |
Unspecified |
| scaffold5795 |
34380 |
34920 |
- |
RS541 |
Unspecified |
| scaffold5795 |
34921 |
35227 |
- |
PL9 |
Unspecified |
| scaffold5795 |
35431 |
35640 |
+ |
RS16042 |
Unspecified |
| scaffold5795 |
35632 |
35719 |
+ |
(CCG)n |
Simple_repeat |
| scaffold5795 |
35723 |
35767 |
+ |
(CCCGAA)n |
Simple_repeat |
| scaffold5795 |
35768 |
35866 |
+ |
(GGAGGT)n |
Simple_repeat |
| scaffold5795 |
35833 |
35906 |
+ |
(CGG)n |
Simple_repeat |
| scaffold5795 |
36099 |
36158 |
+ |
(GTC)n |
Simple_repeat |
| scaffold5795 |
36162 |
36191 |
+ |
(TGA)n |
Simple_repeat |
| scaffold5795 |
36724 |
36820 |
+ |
(ATA)n |
Simple_repeat |
| scaffold5795 |
37028 |
37565 |
- |
PL406 |
Unspecified |
| scaffold5795 |
37720 |
38136 |
+ |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold5795 |
38136 |
39068 |
+ |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold5795 |
38186 |
38271 |
+ |
COPIA-I_MT |
LTR/Copia |
| scaffold5795 |
39165 |
39860 |
+ |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold5795 |
40092 |
40318 |
+ |
Copia-37-I_ZM |
LTR/Copia |
| scaffold5795 |
42201 |
42241 |
+ |
(TAT)n |
Simple_repeat |
| scaffold5795 |
42384 |
42487 |
+ |
(TAA)n |
Simple_repeat |
| scaffold5795 |
44438 |
44465 |
+ |
(ATAAT)n |
Simple_repeat |
| scaffold5795 |
44569 |
44605 |
+ |
(A)n |
Simple_repeat |
| scaffold5795 |
45217 |
45273 |
+ |
(TATT)n |
Simple_repeat |
| scaffold5795 |
46812 |
46866 |
+ |
(AACTG)n |
Simple_repeat |
| scaffold5795 |
46867 |
46957 |
+ |
(TAA)n |
Simple_repeat |
| scaffold5795 |
50741 |
50904 |
- |
hAT-N16_ZM |
DNA/hAT-Ac |
| scaffold5795 |
51039 |
51057 |
+ |
(AATCAAT)n |
Simple_repeat |
| scaffold5795 |
51058 |
51099 |
+ |
(AAT)n |
Simple_repeat |
| scaffold5795 |
51105 |
51134 |
+ |
A-rich |
Low_complexity |
| scaffold5795 |
51706 |
51722 |
+ |
(A)n |
Simple_repeat |
| scaffold5795 |
51985 |
52014 |
+ |
(T)n |
Simple_repeat |
| scaffold5795 |
52405 |
52428 |
+ |
(T)n |
Simple_repeat |
| scaffold5795 |
52685 |
52767 |
+ |
(TAATTAA)n |
Simple_repeat |
| scaffold5795 |
54365 |
54569 |
- |
PL582 |
Unspecified |
| scaffold5795 |
54390 |
54854 |
- |
PL261 |
Unspecified |
| scaffold5795 |
59110 |
59156 |
+ |
A-rich |
Low_complexity |
| scaffold5795 |
59563 |
59617 |
+ |
(TAA)n |
Simple_repeat |
| scaffold5795 |
60023 |
60055 |
+ |
(TA)n |
Simple_repeat |
| scaffold5795 |
60166 |
60188 |
+ |
(T)n |
Simple_repeat |
| scaffold5795 |
60631 |
60677 |
+ |
PL169 |
Unspecified |
| scaffold5795 |
60685 |
61365 |
+ |
RS5347 |
Unspecified |
| scaffold5795 |
61605 |
61680 |
- |
PL289 |
Unspecified |
| scaffold5795 |
61777 |
62047 |
+ |
RS1943 |
Unspecified |
| scaffold5795 |
62514 |
62601 |
+ |
(ATTAATA)n |
Simple_repeat |
| scaffold5795 |
62514 |
62881 |
+ |
(ATTAATA)n |
Simple_repeat |
| scaffold5795 |
62579 |
62881 |
- |
PL289 |
Unspecified |
| scaffold5795 |
62880 |
62973 |
+ |
RS16382 |
Unspecified |
| scaffold5795 |
64287 |
64317 |
+ |
(TA)n |
Simple_repeat |
| scaffold5795 |
65066 |
65496 |
- |
PL296 |
Unspecified |
| scaffold5795 |
65580 |
65897 |
+ |
PL477 |
Unspecified |
| scaffold5795 |
68953 |
68998 |
+ |
(TTCACTA)n |
Simple_repeat |
| scaffold5795 |
69038 |
69084 |
- |
RS169 |
Unspecified |
| scaffold5795 |
69045 |
69084 |
- |
RS169 |
Unspecified |
| scaffold5795 |
69502 |
69785 |
+ |
RS586 |
Unspecified |
| scaffold5795 |
69784 |
70081 |
+ |
RS221 |
Unspecified |
| scaffold5795 |
70096 |
70459 |
- |
RS8 |
Unspecified |
| scaffold5795 |
70573 |
70615 |
+ |
(TTAAT)n |
Simple_repeat |
| scaffold5795 |
71354 |
71374 |
+ |
(T)n |
Simple_repeat |
| scaffold5795 |
71748 |
71788 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold5795 |
72348 |
72383 |
+ |
(T)n |
Simple_repeat |
| scaffold5795 |
72444 |
72674 |
+ |
RS10 |
Unspecified |
| scaffold5795 |
72707 |
72723 |
+ |
(A)n |
Simple_repeat |
| scaffold5795 |
72721 |
72814 |
+ |
A-rich |
Low_complexity |
| scaffold5795 |
73141 |
73205 |
- |
Gypsy-44_GM-LTR |
LTR/Gypsy |
| scaffold5795 |
73268 |
73289 |
+ |
(A)n |
Simple_repeat |
| scaffold5795 |
73290 |
73313 |
+ |
A-rich |
Low_complexity |
| scaffold5795 |
73802 |
73821 |
+ |
(A)n |
Simple_repeat |
| scaffold5795 |
74419 |
74640 |
+ |
RS6049 |
Unspecified |
| scaffold5795 |
74693 |
74830 |
+ |
RS4851 |
Unspecified |
| scaffold5795 |
75121 |
75427 |
+ |
RS10630 |
Unspecified |
| scaffold5795 |
75861 |
76048 |
+ |
RS14389 |
Unspecified |
| scaffold5795 |
76093 |
76320 |
- |
RS5384 |
Unspecified |
| scaffold5795 |
76606 |
77650 |
- |
PL530 |
Unspecified |
| scaffold5795 |
77995 |
78327 |
+ |
(TTA)n |
Simple_repeat |
| scaffold5795 |
78254 |
78336 |
+ |
MUDRAVI1 |
DNA/MULE-MuDR |
| scaffold5795 |
78286 |
78349 |
+ |
Copia-89_VV-I |
LTR/Copia |
| scaffold5795 |
78482 |
78550 |
+ |
RS30 |
Unspecified |
| scaffold5795 |
78495 |
78921 |
- |
PL578 |
Unspecified |
| scaffold5795 |
79698 |
79754 |
+ |
(TATTATT)n |
Simple_repeat |
| scaffold5795 |
80178 |
80263 |
+ |
Gypsy-72-LTR_ZM |
LTR/Gypsy |
| scaffold5795 |
80353 |
80415 |
+ |
(AATTTAA)n |
Simple_repeat |
| scaffold5795 |
81279 |
81304 |
+ |
(T)n |
Simple_repeat |
| scaffold5795 |
81470 |
81617 |
+ |
RS3112 |
Unspecified |
| scaffold5795 |
81751 |
81778 |
+ |
(T)n |
Simple_repeat |
| scaffold5795 |
84612 |
84639 |
+ |
(ATAAT)n |
Simple_repeat |
| scaffold5795 |
84709 |
84736 |
+ |
(A)n |
Simple_repeat |
| scaffold5795 |
85239 |
85278 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold5795 |
85690 |
85969 |
+ |
PL840 |
Unspecified |
| scaffold5795 |
86183 |
86864 |
- |
MuDR_A_B |
MuDR_A_B(TransposonPSI) |
| scaffold5795 |
86183 |
86620 |
- |
MuDR_A_B |
MuDR_A_B(TransposonPSI) |
| scaffold5795 |
86488 |
86864 |
- |
RS3601 |
Unspecified |
| scaffold5795 |
86862 |
87116 |
+ |
RS270 |
Unspecified |
| scaffold5795 |
87205 |
87834 |
- |
RS112 |
Unspecified |
| scaffold5795 |
89888 |
90137 |
- |
RS370 |
Unspecified |
| scaffold5795 |
91478 |
91519 |
- |
WHAM2_TM-int |
LTR/Gypsy |
| scaffold5795 |
91762 |
91799 |
+ |
(TTCTTT)n |
Simple_repeat |
| scaffold5795 |
92261 |
92406 |
- |
Athila6B_I-int |
LTR/Gypsy |
| scaffold5795 |
92638 |
92669 |
+ |
(GGCC)n |
Simple_repeat |