scaffold581 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold581 |
779 |
824 |
+ |
A-rich |
Low_complexity |
| scaffold581 |
3526 |
3651 |
- |
PL785 |
Unspecified |
| scaffold581 |
3853 |
3954 |
+ |
(TGTTTA)n |
Simple_repeat |
| scaffold581 |
4112 |
4170 |
+ |
A-rich |
Low_complexity |
| scaffold581 |
4948 |
5021 |
+ |
(ATACGT)n |
Simple_repeat |
| scaffold581 |
5026 |
5096 |
+ |
(ACAATGA)n |
Simple_repeat |
| scaffold581 |
5026 |
6989 |
+ |
(ACAATGA)n |
Simple_repeat |
| scaffold581 |
5072 |
6989 |
- |
RS30 |
Unspecified |
| scaffold581 |
7009 |
7106 |
+ |
Gypsy-6_CP-I |
LTR/Gypsy |
| scaffold581 |
7305 |
8662 |
+ |
Gypsy-6_CP-I |
LTR/Gypsy |
| scaffold581 |
8881 |
10251 |
+ |
Gypsy-70-I_ZM |
LTR/Gypsy |
| scaffold581 |
10632 |
10667 |
+ |
(GACAC)n |
Simple_repeat |
| scaffold581 |
13622 |
13657 |
+ |
(GACAC)n |
Simple_repeat |
| scaffold581 |
14957 |
15172 |
+ |
PL143 |
Unspecified |
| scaffold581 |
16077 |
16129 |
- |
RS246 |
Unspecified |
| scaffold581 |
17231 |
17417 |
+ |
RS4 |
Unspecified |
| scaffold581 |
18077 |
18249 |
+ |
PL610 |
Unspecified |
| scaffold581 |
18233 |
18498 |
- |
PL490 |
Unspecified |
| scaffold581 |
18655 |
18710 |
+ |
A-rich |
Low_complexity |
| scaffold581 |
18711 |
18716 |
+ |
(ATAA)n |
Simple_repeat |
| scaffold581 |
22017 |
22042 |
+ |
(GTG)n |
Simple_repeat |
| scaffold581 |
25987 |
26085 |
+ |
RS17 |
Unspecified |
| scaffold581 |
26081 |
26270 |
- |
RS915 |
Unspecified |
| scaffold581 |
27011 |
27036 |
+ |
(GTGTTT)n |
Simple_repeat |
| scaffold581 |
27087 |
27303 |
+ |
RS3199 |
Unspecified |
| scaffold581 |
27888 |
27941 |
+ |
(T)n |
Simple_repeat |
| scaffold581 |
28697 |
28762 |
+ |
A-rich |
Low_complexity |
| scaffold581 |
29427 |
29805 |
+ |
(TA)n |
Simple_repeat |
| scaffold581 |
29427 |
29488 |
+ |
(TA)n |
Simple_repeat |
| scaffold581 |
29468 |
29805 |
- |
RS1424 |
Unspecified |
| scaffold581 |
29790 |
29929 |
+ |
RS1569 |
Unspecified |
| scaffold581 |
30043 |
30227 |
- |
RS2744 |
Unspecified |
| scaffold581 |
31160 |
31187 |
+ |
(ATTAT)n |
Simple_repeat |
| scaffold581 |
31261 |
31309 |
+ |
RS737 |
Unspecified |
| scaffold581 |
31325 |
31733 |
+ |
RS737 |
Unspecified |
| scaffold581 |
31889 |
31927 |
+ |
A-rich |
Low_complexity |
| scaffold581 |
33899 |
33928 |
+ |
(TA)n |
Simple_repeat |
| scaffold581 |
34055 |
34071 |
+ |
(A)n |
Simple_repeat |
| scaffold581 |
35791 |
35864 |
+ |
(TTGTTCT)n |
Simple_repeat |
| scaffold581 |
36098 |
36196 |
- |
RS2496 |
Unspecified |
| scaffold581 |
36250 |
36643 |
- |
RS458 |
Unspecified |
| scaffold581 |
36706 |
36814 |
+ |
PL859 |
Unspecified |
| scaffold581 |
37873 |
37906 |
+ |
(TAAGTT)n |
Simple_repeat |
| scaffold581 |
37912 |
37937 |
+ |
(A)n |
Simple_repeat |
| scaffold581 |
38190 |
38232 |
+ |
(TTT)n |
Simple_repeat |
| scaffold581 |
39147 |
39216 |
+ |
(ATTTAA)n |
Simple_repeat |
| scaffold581 |
40041 |
40128 |
+ |
A-rich |
Low_complexity |
| scaffold581 |
40464 |
40480 |
+ |
(T)n |
Simple_repeat |
| scaffold581 |
41138 |
41189 |
+ |
(TACA)n |
Simple_repeat |
| scaffold581 |
41805 |
41899 |
+ |
A-rich |
Low_complexity |
| scaffold581 |
41934 |
41987 |
+ |
(GA)n |
Simple_repeat |
| scaffold581 |
42449 |
42706 |
- |
RS13210 |
Unspecified |
| scaffold581 |
43150 |
43196 |
+ |
(T)n |
Simple_repeat |
| scaffold581 |
43243 |
43300 |
+ |
RS7596 |
Unspecified |
| scaffold581 |
43713 |
43828 |
- |
RS7596 |
Unspecified |
| scaffold581 |
44359 |
44400 |
+ |
A-rich |
Low_complexity |
| scaffold581 |
44413 |
44785 |
+ |
RS7062 |
Unspecified |
| scaffold581 |
45136 |
45181 |
+ |
(ATTTT)n |
Simple_repeat |
| scaffold581 |
45562 |
45665 |
+ |
(GGTTG)n |
Simple_repeat |
| scaffold581 |
46928 |
47485 |
+ |
RS1290 |
Unspecified |
| scaffold581 |
47933 |
47965 |
+ |
(CATAG)n |
Simple_repeat |
| scaffold581 |
48265 |
48299 |
+ |
(ACAAA)n |
Simple_repeat |
| scaffold581 |
48479 |
48697 |
- |
MuDR_A_B |
MuDR_A_B(TransposonPSI) |
| scaffold581 |
48699 |
49193 |
- |
MuDR_A_B |
MuDR_A_B(TransposonPSI) |
| scaffold581 |
49236 |
49268 |
+ |
RS2880 |
Unspecified |
| scaffold581 |
49273 |
49380 |
- |
RS4247 |
Unspecified |
| scaffold581 |
49379 |
50355 |
+ |
PL544 |
Unspecified |
| scaffold581 |
50352 |
50957 |
- |
RS4247 |
Unspecified |
| scaffold581 |
50689 |
51170 |
+ |
RS3350 |
Unspecified |
| scaffold581 |
51171 |
51430 |
- |
LTR2-ZM_LTR |
LTR |
| scaffold581 |
51510 |
52000 |
+ |
PL795 |
Unspecified |
| scaffold581 |
54603 |
54845 |
+ |
RS132 |
Unspecified |
| scaffold581 |
54988 |
55030 |
+ |
(TATTTTT)n |
Simple_repeat |
| scaffold581 |
55361 |
55401 |
+ |
(ATT)n |
Simple_repeat |
| scaffold581 |
55477 |
55721 |
- |
RS10753 |
Unspecified |
| scaffold581 |
56618 |
56914 |
- |
RS172 |
Unspecified |
| scaffold581 |
57075 |
57149 |
+ |
PL174 |
Unspecified |
| scaffold581 |
57556 |
57615 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold581 |
58120 |
58152 |
+ |
A-rich |
Low_complexity |
| scaffold581 |
58183 |
58623 |
+ |
RS1447 |
Unspecified |
| scaffold581 |
58614 |
60111 |
+ |
RS254 |
Unspecified |
| scaffold581 |
59243 |
60913 |
+ |
RS51 |
Unspecified |
| scaffold581 |
62067 |
62539 |
+ |
GA-rich |
Low_complexity |
| scaffold581 |
62067 |
62105 |
+ |
GA-rich |
Low_complexity |
| scaffold581 |
62094 |
62539 |
+ |
PL947 |
Unspecified |
| scaffold581 |
62672 |
62891 |
+ |
Gypsy-23_VV-I |
LTR/Gypsy |
| scaffold581 |
63460 |
63715 |
- |
PL139 |
Unspecified |
| scaffold581 |
66681 |
66699 |
+ |
(TTA)n |
Simple_repeat |
| scaffold581 |
66790 |
66831 |
+ |
(TAT)n |
Simple_repeat |
| scaffold581 |
66832 |
66867 |
+ |
(GTT)n |
Simple_repeat |
| scaffold581 |
66865 |
67189 |
- |
PL920 |
Unspecified |
| scaffold581 |
67489 |
67537 |
+ |
(AAACAAC)n |
Simple_repeat |
| scaffold581 |
67534 |
68432 |
+ |
PL877 |
Unspecified |
| scaffold581 |
67535 |
68290 |
+ |
PL746 |
Unspecified |
| scaffold581 |
72743 |
72771 |
+ |
(CTAATT)n |
Simple_repeat |
| scaffold581 |
74728 |
74760 |
+ |
(TTATT)n |
Simple_repeat |
| scaffold581 |
74863 |
75131 |
+ |
RS303 |
Unspecified |
| scaffold581 |
75131 |
76266 |
- |
RS934 |
Unspecified |
| scaffold581 |
75292 |
76268 |
+ |
RS1941 |
Unspecified |
| scaffold581 |
76548 |
77678 |
+ |
RS1496 |
Unspecified |
| scaffold581 |
77671 |
77714 |
+ |
RS51 |
Unspecified |
| scaffold581 |
77972 |
78592 |
- |
RS984 |
Unspecified |
| scaffold581 |
78302 |
78784 |
+ |
RS730 |
Unspecified |
| scaffold581 |
78813 |
79526 |
- |
RS1123 |
Unspecified |
| scaffold581 |
79526 |
80161 |
+ |
RS14 |
Unspecified |
| scaffold581 |
83325 |
83369 |
+ |
A-rich |
Low_complexity |
| scaffold581 |
83931 |
84648 |
+ |
RS21 |
Unspecified |
| scaffold581 |
84126 |
85079 |
- |
RS838 |
Unspecified |
| scaffold581 |
85184 |
85265 |
+ |
Atlantys1_I-int |
LTR/Gypsy |
| scaffold581 |
86252 |
86273 |
+ |
(ACA)n |
Simple_repeat |
| scaffold581 |
86691 |
87266 |
+ |
RS706 |
Unspecified |
| scaffold581 |
87195 |
87711 |
+ |
RS225 |
Unspecified |
| scaffold581 |
87884 |
87937 |
+ |
(CAAGTC)n |
Simple_repeat |
| scaffold581 |
88204 |
90347 |
- |
RS934 |
Unspecified |
| scaffold581 |
90627 |
90672 |
+ |
(AACTA)n |
Simple_repeat |
| scaffold581 |
90826 |
90875 |
+ |
(TTGTTT)n |
Simple_repeat |
| scaffold581 |
90905 |
90944 |
+ |
(CATTT)n |
Simple_repeat |
| scaffold581 |
91179 |
91217 |
- |
Gypsy-120_SB-I |
LTR/Gypsy |
| scaffold581 |
91778 |
91804 |
+ |
(T)n |
Simple_repeat |
| scaffold581 |
92488 |
92536 |
- |
Gypsy-44_Mad-I |
LTR/Gypsy |
| scaffold581 |
92664 |
92696 |
+ |
(AACAA)n |
Simple_repeat |
| scaffold581 |
93864 |
93897 |
+ |
(CGGC)n |
Simple_repeat |
| scaffold581 |
93967 |
94004 |
+ |
(TCTTTTG)n |
Simple_repeat |
| scaffold581 |
94229 |
94847 |
- |
RS410 |
Unspecified |
| scaffold581 |
95323 |
95400 |
+ |
(ATCA)n |
Simple_repeat |
| scaffold581 |
95664 |
95712 |
+ |
(TG)n |
Simple_repeat |
| scaffold581 |
95728 |
95745 |
+ |
(T)n |
Simple_repeat |
| scaffold581 |
95866 |
95903 |
+ |
(TATCG)n |
Simple_repeat |
| scaffold581 |
96294 |
96525 |
- |
Gypsy-2_Pru-I |
LTR/Gypsy |
| scaffold581 |
96762 |
96796 |
+ |
A-rich |
Low_complexity |
| scaffold581 |
96987 |
97020 |
+ |
(AATAAC)n |
Simple_repeat |
| scaffold581 |
97021 |
97034 |
+ |
A-rich |
Low_complexity |
| scaffold581 |
97172 |
97223 |
+ |
(TAAAAC)n |
Simple_repeat |
| scaffold581 |
101386 |
101404 |
+ |
(T)n |
Simple_repeat |
| scaffold581 |
101975 |
102012 |
+ |
(TTACTT)n |
Simple_repeat |
| scaffold581 |
102755 |
102846 |
+ |
(CCATAT)n |
Simple_repeat |
| scaffold581 |
102988 |
103014 |
+ |
A-rich |
Low_complexity |
| scaffold581 |
103292 |
103329 |
+ |
(ATCCAT)n |
Simple_repeat |
| scaffold581 |
103461 |
103487 |
+ |
(AAACA)n |
Simple_repeat |
| scaffold581 |
103512 |
103535 |
+ |
(A)n |
Simple_repeat |
| scaffold581 |
103749 |
103777 |
+ |
(T)n |
Simple_repeat |
| scaffold581 |
105003 |
105014 |
+ |
(ATTCT)n |
Simple_repeat |
| scaffold581 |
105016 |
105046 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold581 |
105052 |
105084 |
+ |
(ATTCT)n |
Simple_repeat |
| scaffold581 |
105199 |
105235 |
+ |
(TGCGCCT)n |
Simple_repeat |
| scaffold581 |
108606 |
108633 |
+ |
(T)n |
Simple_repeat |
| scaffold581 |
108797 |
108846 |
- |
PL171 |
Unspecified |
| scaffold581 |
108862 |
108883 |
+ |
(T)n |
Simple_repeat |
| scaffold581 |
109180 |
109212 |
+ |
(T)n |
Simple_repeat |
| scaffold581 |
109390 |
109483 |
- |
PL171 |
Unspecified |
| scaffold581 |
109517 |
109566 |
+ |
A-rich |
Low_complexity |
| scaffold581 |
110504 |
110540 |
+ |
(TA)n |
Simple_repeat |
| scaffold581 |
110930 |
110967 |
+ |
(TTT)n |
Simple_repeat |
| scaffold581 |
111284 |
111605 |
- |
RS748 |
Unspecified |
| scaffold581 |
111979 |
112029 |
- |
RS10 |
Unspecified |
| scaffold581 |
111985 |
112248 |
+ |
RS10 |
Unspecified |
| scaffold581 |
112296 |
112376 |
+ |
(ATA)n |
Simple_repeat |
| scaffold581 |
112630 |
112773 |
+ |
(AAT)n |
Simple_repeat |
| scaffold581 |
112888 |
112939 |
+ |
(AAT)n |
Simple_repeat |
| scaffold581 |
112962 |
113033 |
- |
CACTA_LP |
DNA/CMC-EnSpm |
| scaffold581 |
113412 |
113454 |
+ |
(TTTTTGG)n |
Simple_repeat |
| scaffold581 |
114311 |
115045 |
+ |
LINE |
LINE(TransposonPSI) |
| scaffold581 |
115065 |
115326 |
- |
PL441 |
Unspecified |
| scaffold581 |
119332 |
120424 |
+ |
RS425 |
Unspecified |
| scaffold581 |
120931 |
121094 |
- |
PL475 |
Unspecified |
| scaffold581 |
121072 |
122051 |
- |
PL475 |
Unspecified |
| scaffold581 |
123178 |
123951 |
+ |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold581 |
123526 |
123963 |
+ |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold581 |
137180 |
138155 |
- |
RS203 |
Unspecified |