scaffold5816 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold5816 |
536 |
590 |
+ |
PREM1A_ZM_I-int |
LTR/Copia |
| scaffold5816 |
591 |
607 |
+ |
Gypsy-127_ZM-I |
LTR/Gypsy |
| scaffold5816 |
2690 |
2732 |
+ |
(GTTTATT)n |
Simple_repeat |
| scaffold5816 |
3035 |
3101 |
+ |
(TTAA)n |
Simple_repeat |
| scaffold5816 |
3739 |
3838 |
- |
Gypsy-72-LTR_ZM |
LTR/Gypsy |
| scaffold5816 |
5316 |
5469 |
- |
RS39 |
Unspecified |
| scaffold5816 |
5469 |
5740 |
+ |
RS95 |
Unspecified |
| scaffold5816 |
6351 |
6408 |
+ |
(ATT)n |
Simple_repeat |
| scaffold5816 |
7456 |
7482 |
+ |
A-rich |
Low_complexity |
| scaffold5816 |
7753 |
7786 |
+ |
(TAT)n |
Simple_repeat |
| scaffold5816 |
8065 |
8330 |
- |
RS1888 |
Unspecified |
| scaffold5816 |
8681 |
9171 |
- |
PL269 |
Unspecified |
| scaffold5816 |
9402 |
9413 |
+ |
(ATTT)n |
Simple_repeat |
| scaffold5816 |
9414 |
9435 |
+ |
(TA)n |
Simple_repeat |
| scaffold5816 |
9436 |
9441 |
+ |
(ATTT)n |
Simple_repeat |
| scaffold5816 |
9593 |
9817 |
+ |
Copia-3_PTri-I |
LTR/Copia |
| scaffold5816 |
10546 |
10809 |
+ |
RS26 |
Unspecified |
| scaffold5816 |
10886 |
10928 |
+ |
RS1347 |
Unspecified |
| scaffold5816 |
10917 |
11085 |
+ |
RS482 |
Unspecified |
| scaffold5816 |
14328 |
14561 |
+ |
OARE1_I-int |
LTR/Copia |
| scaffold5816 |
18194 |
18274 |
+ |
(TTA)n |
Simple_repeat |
| scaffold5816 |
18440 |
18477 |
- |
ATRAN |
DNA? |
| scaffold5816 |
19868 |
19971 |
+ |
RS17262 |
Unspecified |
| scaffold5816 |
20492 |
20702 |
- |
RS16888 |
Unspecified |
| scaffold5816 |
21206 |
21246 |
+ |
(TATTTG)n |
Simple_repeat |
| scaffold5816 |
21623 |
21648 |
+ |
(T)n |
Simple_repeat |
| scaffold5816 |
22804 |
23681 |
- |
RS408 |
Unspecified |
| scaffold5816 |
23680 |
23705 |
+ |
Gypsy-10_Mad-I |
LTR/Gypsy |
| scaffold5816 |
23936 |
23978 |
+ |
(CTT)n |
Simple_repeat |
| scaffold5816 |
24028 |
24054 |
+ |
(CCA)n |
Simple_repeat |
| scaffold5816 |
24127 |
24659 |
+ |
Athila7A_I-int |
LTR/Gypsy |
| scaffold5816 |
25346 |
25410 |
+ |
Gypsy-47_STu-I |
LTR/Gypsy |
| scaffold5816 |
25577 |
26198 |
+ |
MEGY-I_MT |
LTR/Gypsy |
| scaffold5816 |
26479 |
26627 |
+ |
RS983 |
Unspecified |
| scaffold5816 |
26525 |
26661 |
+ |
Athila7A_I-int |
LTR/Gypsy |
| scaffold5816 |
27012 |
27583 |
+ |
RS359 |
Unspecified |
| scaffold5816 |
28147 |
28204 |
+ |
Athila7A_I-int |
LTR/Gypsy |
| scaffold5816 |
28205 |
28518 |
- |
RS2862 |
Unspecified |
| scaffold5816 |
28397 |
28736 |
- |
RS408 |
Unspecified |
| scaffold5816 |
30698 |
30956 |
+ |
Copia-66_GM-I |
LTR/Copia |
| scaffold5816 |
31177 |
31364 |
+ |
Copia-66_GM-LTR |
LTR/Copia |
| scaffold5816 |
31445 |
31483 |
+ |
(TTAACAC)n |
Simple_repeat |
| scaffold5816 |
31661 |
31693 |
+ |
(A)n |
Simple_repeat |
| scaffold5816 |
31962 |
32066 |
+ |
RS9701 |
Unspecified |
| scaffold5816 |
32087 |
32343 |
+ |
RS10171 |
Unspecified |
| scaffold5816 |
32249 |
32486 |
+ |
RS13296 |
Unspecified |
| scaffold5816 |
32803 |
32907 |
+ |
RS9701 |
Unspecified |
| scaffold5816 |
32913 |
33173 |
+ |
RS10171 |
Unspecified |
| scaffold5816 |
33079 |
33316 |
+ |
RS13296 |
Unspecified |
| scaffold5816 |
33815 |
34032 |
+ |
PL727 |
Unspecified |
| scaffold5816 |
34459 |
34469 |
+ |
EnSpm-34_SBi |
DNA/CMC-EnSpm |
| scaffold5816 |
34470 |
34615 |
+ |
(TAA)n |
Simple_repeat |
| scaffold5816 |
34616 |
34651 |
+ |
EnSpm-34_SBi |
DNA/CMC-EnSpm |
| scaffold5816 |
35119 |
35201 |
+ |
(TTA)n |
Simple_repeat |
| scaffold5816 |
35204 |
35224 |
+ |
(TAA)n |
Simple_repeat |
| scaffold5816 |
35225 |
35300 |
+ |
(AAC)n |
Simple_repeat |
| scaffold5816 |
35301 |
35315 |
+ |
(TAA)n |
Simple_repeat |
| scaffold5816 |
35328 |
35394 |
+ |
(AAAACTTCAG)n |
Simple_repeat |
| scaffold5816 |
35517 |
35603 |
+ |
HADES_TA |
DNA/TcMar-Stowaway |
| scaffold5816 |
35671 |
36290 |
- |
PL622 |
Unspecified |
| scaffold5816 |
37964 |
38085 |
+ |
RS250 |
Unspecified |
| scaffold5816 |
38420 |
38445 |
+ |
(T)n |
Simple_repeat |
| scaffold5816 |
41137 |
41261 |
+ |
Copia4-PTR_LTR |
LTR/Copia |
| scaffold5816 |
41297 |
41370 |
+ |
(ATT)n |
Simple_repeat |