scaffold5834 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold5834 |
1 |
1189 |
+ |
Copia25-PTR_I-int |
LTR/Copia |
| scaffold5834 |
1 |
1963 |
+ |
Copia25-PTR_I-int |
LTR/Copia |
| scaffold5834 |
1102 |
1963 |
- |
PL816 |
Unspecified |
| scaffold5834 |
2892 |
2937 |
+ |
A-rich |
Low_complexity |
| scaffold5834 |
3024 |
3060 |
+ |
(TTGTT)n |
Simple_repeat |
| scaffold5834 |
3287 |
3371 |
+ |
(AATATT)n |
Simple_repeat |
| scaffold5834 |
4335 |
4362 |
+ |
(ATTTT)n |
Simple_repeat |
| scaffold5834 |
4645 |
4834 |
+ |
RS4409 |
Unspecified |
| scaffold5834 |
4835 |
5193 |
+ |
RS2025 |
Unspecified |
| scaffold5834 |
4908 |
7552 |
+ |
RS141 |
Unspecified |
| scaffold5834 |
7320 |
7678 |
+ |
PL898 |
Unspecified |
| scaffold5834 |
8571 |
8830 |
+ |
RS23 |
Unspecified |
| scaffold5834 |
8991 |
9371 |
+ |
(ATAA)n |
Simple_repeat |
| scaffold5834 |
9236 |
9371 |
+ |
(ATAA)n |
Simple_repeat |
| scaffold5834 |
9397 |
9853 |
+ |
RS6142 |
Unspecified |
| scaffold5834 |
11157 |
11267 |
+ |
RS27 |
Unspecified |
| scaffold5834 |
13047 |
13082 |
+ |
(TGA)n |
Simple_repeat |
| scaffold5834 |
14023 |
14787 |
+ |
GA-rich |
Low_complexity |
| scaffold5834 |
14687 |
14787 |
+ |
GA-rich |
Low_complexity |
| scaffold5834 |
16105 |
16143 |
+ |
(ATTTTT)n |
Simple_repeat |
| scaffold5834 |
16915 |
19536 |
+ |
RS66 |
Unspecified |
| scaffold5834 |
17667 |
17885 |
+ |
RS313 |
Unspecified |
| scaffold5834 |
19768 |
20342 |
+ |
RS348 |
Unspecified |
| scaffold5834 |
20581 |
21614 |
+ |
Gypsy-23_VV-I |
LTR/Gypsy |
| scaffold5834 |
21905 |
21923 |
+ |
(A)n |
Simple_repeat |
| scaffold5834 |
22150 |
22304 |
+ |
Gypsy-26_VV-I |
LTR/Gypsy |
| scaffold5834 |
22583 |
22604 |
+ |
(A)n |
Simple_repeat |
| scaffold5834 |
23729 |
24554 |
- |
RS667 |
Unspecified |
| scaffold5834 |
24560 |
25182 |
+ |
PL554 |
Unspecified |
| scaffold5834 |
24722 |
25534 |
+ |
PL921 |
Unspecified |
| scaffold5834 |
24949 |
26073 |
+ |
RS3063 |
Unspecified |
| scaffold5834 |
25747 |
26881 |
+ |
PL495 |
Unspecified |
| scaffold5834 |
27478 |
27511 |
+ |
A-rich |
Low_complexity |
| scaffold5834 |
28873 |
29851 |
- |
Copia25-PTR_I-int |
LTR/Copia |
| scaffold5834 |
30187 |
30843 |
- |
Copia25-PTR_I-int |
LTR/Copia |
| scaffold5834 |
30916 |
31501 |
- |
RIRE1_I-int |
LTR/Copia |
| scaffold5834 |
31470 |
31943 |
- |
Copia25-PTR_I-int |
LTR/Copia |
| scaffold5834 |
32391 |
32595 |
- |
RS13321 |
Unspecified |
| scaffold5834 |
33801 |
33828 |
+ |
(ATAAA)n |
Simple_repeat |
| scaffold5834 |
35084 |
35125 |
+ |
A-rich |
Low_complexity |
| scaffold5834 |
38015 |
38103 |
+ |
(TTCTT)n |
Simple_repeat |
| scaffold5834 |
38227 |
38453 |
+ |
RS4869 |
Unspecified |
| scaffold5834 |
38572 |
38655 |
+ |
Gypsy-128_GM-I |
LTR/Gypsy |
| scaffold5834 |
38659 |
38720 |
- |
RS12071 |
Unspecified |
| scaffold5834 |
38709 |
39159 |
- |
PL348 |
Unspecified |
| scaffold5834 |
38962 |
39485 |
- |
PL202 |
Unspecified |
| scaffold5834 |
39102 |
39588 |
+ |
RS16 |
Unspecified |
| scaffold5834 |
42092 |
42128 |
+ |
Gypsy-9_EPa-I |
LTR/Gypsy |
| scaffold5834 |
44432 |
45307 |
- |
Copia25-PTR_I-int |
LTR/Copia |
| scaffold5834 |
44870 |
45307 |
- |
Copia25-PTR_I-int |
LTR/Copia |
| scaffold5834 |
48098 |
48235 |
- |
RS7695 |
Unspecified |