scaffold5835 Repeat List
genome start end strand repeat-name repeat-class
scaffold5835 1684 1715 + (TTCACTA)n Simple_repeat
scaffold5835 1832 1949 + PL472 Unspecified
scaffold5835 1965 2088 - PL143 Unspecified
scaffold5835 2198 2249 + (TTATTAA)n Simple_repeat
scaffold5835 2768 2810 + A-rich Low_complexity
scaffold5835 3356 3388 + GA-rich Low_complexity
scaffold5835 3403 4197 + RS131 Unspecified
scaffold5835 4080 4217 + RS62 Unspecified
scaffold5835 4111 4297 + RS17814 Unspecified
scaffold5835 5081 5140 + (ACA)n Simple_repeat
scaffold5835 5709 5781 + (TGA)n Simple_repeat
scaffold5835 5783 5841 + (AATG)n Simple_repeat
scaffold5835 5815 5845 + GA-rich Low_complexity
scaffold5835 5941 5975 + (TTATAA)n Simple_repeat
scaffold5835 6502 6553 + A-rich Low_complexity
scaffold5835 6731 6788 + A-rich Low_complexity
scaffold5835 6964 7020 + (AATAT)n Simple_repeat
scaffold5835 8842 8866 + (TTTTA)n Simple_repeat
scaffold5835 9133 9352 + Copia-14_Mad-I LTR/Copia
scaffold5835 9628 10462 + Copia-14_Mad-I LTR/Copia
scaffold5835 10888 12329 + Copia-14_Mad-I LTR/Copia
scaffold5835 12455 12507 + (TTTTA)n Simple_repeat
scaffold5835 15741 15748 + (TTTTC)n Simple_repeat
scaffold5835 15749 15786 + (TCTTTC)n Simple_repeat
scaffold5835 15787 15792 + (TTTTC)n Simple_repeat
scaffold5835 17977 18251 + PL905 Unspecified
scaffold5835 19128 19969 - Gypsy16-VV_I-int LTR/Gypsy
scaffold5835 20999 21430 - Gypsy-3_Pru-I LTR/Gypsy
scaffold5835 22271 23875 - RS399 Unspecified
scaffold5835 24101 24850 - RS15 Unspecified
scaffold5835 25907 26052 - RS4 Unspecified
scaffold5835 26129 28198 - gypsy gypsy(TransposonPSI)
scaffold5835 26130 26393 - Gypsy-10_SB-I LTR/Gypsy
scaffold5835 29331 29375 + (TGTC)n Simple_repeat
scaffold5835 29620 29668 + (GTTAT)n Simple_repeat
scaffold5835 30050 31313 - Gypsy3-VV_I-int LTR/Gypsy
scaffold5835 31383 31634 - Atlantys2_I-int LTR/Gypsy
scaffold5835 31779 32924 - Gypsy-38_Mad-I LTR/Gypsy
scaffold5835 34921 34960 + (TCTGT)n Simple_repeat
scaffold5835 35024 35075 + (TATGT)n Simple_repeat
scaffold5835 35449 35646 - Gypsy16-VV_I-int LTR/Gypsy
scaffold5835 36511 36815 - Gypsy16-VV_I-int LTR/Gypsy
scaffold5835 36961 37307 - Gypsy-199_ZM-I LTR/Gypsy
scaffold5835 37365 38718 - Gypsy-38_Mad-I LTR/Gypsy
scaffold5835 41031 41063 - RS15 Unspecified
scaffold5835 41421 41688 - RS15 Unspecified
scaffold5835 42081 42179 + (TATTA)n Simple_repeat
scaffold5835 43127 43175 + (TATTTT)n Simple_repeat
scaffold5835 43275 43412 + RS8964 Unspecified
scaffold5835 43986 44052 + (GCCCC)n Simple_repeat
scaffold5835 44540 44605 + (AATTTTT)n Simple_repeat
scaffold5835 45196 45385 - RS329 Unspecified
scaffold5835 45735 45774 + RS726 Unspecified
scaffold5835 46278 46428 + (A)n Simple_repeat
scaffold5835 46386 46428 + (A)n Simple_repeat
scaffold5835 46883 46924 + A-rich Low_complexity
scaffold5835 46967 47036 + RS16553 Unspecified
scaffold5835 47062 47247 + RS5 Unspecified
scaffold5835 47864 47919 + (AATC)n Simple_repeat
scaffold5835 48394 48567 + RS11545 Unspecified
scaffold5835 48592 48642 + A-rich Low_complexity
scaffold5835 49478 49530 + A-rich Low_complexity
scaffold5835 52000 52072 + (A)n Simple_repeat
scaffold5835 59929 59973 + A-rich Low_complexity
scaffold5835 60111 60225 + GA-rich Low_complexity
scaffold5835 60307 60339 + (TTCTT)n Simple_repeat
scaffold5835 60550 60752 - RS11124 Unspecified
scaffold5835 61236 61533 + RS10853 Unspecified
scaffold5835 61577 61627 + RS14203 Unspecified
scaffold5835 61667 61887 + RS14203 Unspecified
scaffold5835 62650 62668 + (T)n Simple_repeat
scaffold5835 63368 63401 + (T)n Simple_repeat
scaffold5835 63574 63611 + (T)n Simple_repeat
scaffold5835 63716 63738 + (T)n Simple_repeat
scaffold5835 63785 63840 + A-rich Low_complexity
scaffold5835 63911 63951 + (TTTCATA)n Simple_repeat
scaffold5835 63986 64048 + (AATATAA)n Simple_repeat
scaffold5835 64557 64584 + (TA)n Simple_repeat
scaffold5835 65334 65537 - RS11124 Unspecified
scaffold5835 68734 68859 - RS9033 Unspecified
scaffold5835 69762 70096 + RS579 Unspecified
scaffold5835 70131 70309 - Copia-78_VV-I LTR/Copia
scaffold5835 70530 71081 - Copia-54_VV-I LTR/Copia
scaffold5835 71171 71805 - Copia-54_VV-I LTR/Copia
scaffold5835 71964 71994 + (TGAT)n Simple_repeat
scaffold5835 72919 73042 - RS9033 Unspecified
scaffold5835 73050 73076 + (T)n Simple_repeat
scaffold5835 73805 73851 - RS16604 Unspecified
scaffold5835 76186 76226 - PL759 Unspecified
scaffold5835 76239 76422 + RS13861 Unspecified
scaffold5835 76475 76622 + RS3901 Unspecified
scaffold5835 78294 78484 + (AACTG)n Simple_repeat
scaffold5835 82007 82089 + (TCCCGG)n Simple_repeat
scaffold5835 83113 83263 - RS702 Unspecified
scaffold5835 84025 84058 + (T)n Simple_repeat
scaffold5835 84270 84526 - PL340 Unspecified
scaffold5835 84530 85057 - PL476 Unspecified
scaffold5835 85105 85127 + (TAT)n Simple_repeat
scaffold5835 85764 85827 + (AATTAT)n Simple_repeat
scaffold5835 85979 86131 - PL470 Unspecified
scaffold5835 86127 86178 - RS1351 Unspecified
scaffold5835 86336 86369 + (TT)n Simple_repeat
scaffold5835 87630 87652 + (ATA)n Simple_repeat
scaffold5835 87697 88216 + PL476 Unspecified
scaffold5835 88276 88397 - RS16865 Unspecified
scaffold5835 88651 88695 + (A)n Simple_repeat
scaffold5835 88949 88989 + (T)n Simple_repeat
scaffold5835 88949 89285 + (T)n Simple_repeat
scaffold5835 88982 89285 - RS5235 Unspecified
scaffold5835 89067 89770 + RS995 Unspecified
scaffold5835 89616 89795 - RS10554 Unspecified
scaffold5835 89804 89845 + (A)n Simple_repeat
scaffold5835 89874 89912 + (AATATGT)n Simple_repeat
scaffold5835 90002 90040 + (T)n Simple_repeat
scaffold5835 90045 90140 + RS13100 Unspecified
scaffold5835 90336 90370 + A-rich Low_complexity
scaffold5835 90537 90576 + A-rich Low_complexity
scaffold5835 90779 90819 + (T)n Simple_repeat
scaffold5835 90914 90953 + (ATTAAT)n Simple_repeat
scaffold5835 91104 91185 + RS2984 Unspecified
scaffold5835 91187 91394 + RS7263 Unspecified
scaffold5835 92395 92493 + RS4275 Unspecified
scaffold5835 93672 93708 + (A)n Simple_repeat
scaffold5835 94845 94881 + (TTAATA)n Simple_repeat
scaffold5835 95134 95224 - Copia-75_ST-I LTR/Copia
scaffold5835 95242 95281 + PL255 Unspecified
scaffold5835 97499 97854 + RS1279 Unspecified
scaffold5835 98072 98111 + (ATAA)n Simple_repeat
scaffold5835 99012 99421 + RS2402 Unspecified
scaffold5835 99097 99550 + RS2443 Unspecified
scaffold5835 99220 99621 + RS7308 Unspecified
scaffold5835 100465 100655 - RS5568 Unspecified
scaffold5835 100685 100956 + RS916 Unspecified
scaffold5835 101272 101327 + (TTGATT)n Simple_repeat
scaffold5835 101305 101367 + (TTGATTA)n Simple_repeat
scaffold5835 103080 103283 - RS11124 Unspecified
scaffold5835 107559 107629 + RS17 Unspecified
scaffold5835 107808 107831 + (T)n Simple_repeat
scaffold5835 108363 108393 + (TTGAT)n Simple_repeat
scaffold5835 109442 109482 + (ATTTTTA)n Simple_repeat
scaffold5835 109944 110022 - PL307 Unspecified
scaffold5835 109946 110043 + PL401 Unspecified
scaffold5835 110043 110284 + PL688 Unspecified
scaffold5835 110897 110917 + (A)n Simple_repeat
scaffold5835 111603 112184 - RS126 Unspecified
scaffold5835 112192 112321 - RS542 Unspecified
scaffold5835 112351 112403 + RS542 Unspecified
scaffold5835 112418 112822 + RS931 Unspecified
scaffold5835 112631 112849 - RS402 Unspecified
scaffold5835 113769 113805 + (GAAGAC)n Simple_repeat
scaffold5835 114864 114885 + (A)n Simple_repeat
scaffold5835 115304 115378 + (TAA)n Simple_repeat
scaffold5835 115452 115830 + RS160 Unspecified
scaffold5835 115930 116174 + RS26 Unspecified
scaffold5835 116382 116412 + (TCATTT)n Simple_repeat
scaffold5835 117069 117090 + (A)n Simple_repeat
scaffold5835 118237 118275 + (AACTA)n Simple_repeat
scaffold5835 119036 119074 + (AATAGA)n Simple_repeat
scaffold5835 119322 119439 - RS17 Unspecified
scaffold5835 120082 120203 - RS9033 Unspecified
scaffold5835 120325 120405 + Copia-66_GM-I LTR/Copia
scaffold5835 120621 120845 + RS919 Unspecified
scaffold5835 121114 121181 - PL698 Unspecified
scaffold5835 121231 121360 + (AAT)n Simple_repeat
scaffold5835 122702 122983 + RS897 Unspecified
scaffold5835 123102 123149 + A-rich Low_complexity
scaffold5835 123312 123333 + (A)n Simple_repeat
scaffold5835 123333 123351 + (AG)n Simple_repeat
scaffold5835 123885 123979 + (T)n Simple_repeat
scaffold5835 124282 124780 + RS666 Unspecified
scaffold5835 124857 124878 + (T)n Simple_repeat
scaffold5835 124942 125087 + RS2100 Unspecified
scaffold5835 125133 125329 + RS2015 Unspecified
scaffold5835 125329 125799 + RS2015 Unspecified
scaffold5835 125424 125865 - RS138 Unspecified
scaffold5835 126387 126416 + (TAATT)n Simple_repeat
scaffold5835 127164 127588 + RS3066 Unspecified
scaffold5835 127641 128245 + COP8_I_MT-int LTR/Copia
scaffold5835 128283 128344 + A-rich Low_complexity
scaffold5835 128499 131756 + COP8_I_MT-int LTR/Copia
scaffold5835 132582 132806 + RS3066 Unspecified
scaffold5835 132828 133006 + RS13282 Unspecified
scaffold5835 133200 133261 + (CCA)n Simple_repeat
scaffold5835 133434 133454 + (T)n Simple_repeat
scaffold5835 133668 133687 + (T)n Simple_repeat
scaffold5835 133957 134006 + A-rich Low_complexity
scaffold5835 134179 134213 + (TATTTA)n Simple_repeat
scaffold5835 134790 134901 + (T)n Simple_repeat
scaffold5835 134874 134901 + (T)n Simple_repeat
scaffold5835 134903 135036 - Copia-3_PTri-I LTR/Copia
scaffold5835 135120 135171 - Copia-3_PTri-I LTR/Copia
scaffold5835 135248 135370 + RS1166 Unspecified
scaffold5835 135819 135852 + (AC)n Simple_repeat
scaffold5835 136205 136236 + (TATA)n Simple_repeat
scaffold5835 136274 137499 - RS6631 Unspecified
scaffold5835 137668 137684 + (T)n Simple_repeat
scaffold5835 137979 138089 + RS15629 Unspecified
scaffold5835 138361 138524 - RS874 Unspecified
scaffold5835 140690 140847 + RS1441 Unspecified
scaffold5835 141120 141144 + (A)n Simple_repeat
scaffold5835 143214 143587 - RS8 Unspecified
scaffold5835 143712 143888 + RS1115 Unspecified
scaffold5835 145123 145165 + (AC)n Simple_repeat
scaffold5835 145192 145213 + (A)n Simple_repeat
scaffold5835 145895 146080 - RS549 Unspecified
scaffold5835 146422 146613 + RS460 Unspecified
scaffold5835 146643 146670 + (T)n Simple_repeat
scaffold5835 146855 146874 + (T)n Simple_repeat
scaffold5835 147414 147552 - RS559 Unspecified
scaffold5835 147570 147599 + (T)n Simple_repeat
scaffold5835 147570 147831 + (T)n Simple_repeat
scaffold5835 147590 147831 - RS460 Unspecified
scaffold5835 148468 149229 + Copia-78_ST-I LTR/Copia
scaffold5835 149403 149427 + (CTT)n Simple_repeat
scaffold5835 149481 149810 + Copia-78_ST-I LTR/Copia
scaffold5835 149890 150954 + Copia-78_ST-I LTR/Copia
scaffold5835 151196 152725 + Copia-78_ST-I LTR/Copia
scaffold5835 153486 153953 + RS1927 Unspecified
scaffold5835 154252 154380 + RS16189 Unspecified
scaffold5835 154499 154608 + RS17034 Unspecified
scaffold5835 154634 154679 + (TTATT)n Simple_repeat
scaffold5835 155840 156528 + RS6515 Unspecified
scaffold5835 156838 156854 + (A)n Simple_repeat
scaffold5835 157340 157383 + (AAT)n Simple_repeat
scaffold5835 157592 157665 + (AATTA)n Simple_repeat
scaffold5835 157628 157668 + A-rich Low_complexity
scaffold5835 157893 157923 + (AATC)n Simple_repeat
scaffold5835 158027 158072 + (ATT)n Simple_repeat
scaffold5835 158116 158658 - PL169 Unspecified
scaffold5835 158748 159036 + (ATTATG)n Simple_repeat
scaffold5835 158748 158794 + (ATTATG)n Simple_repeat
scaffold5835 158786 159036 - PL169 Unspecified
scaffold5835 158982 159235 - RS861 Unspecified
scaffold5835 159120 159304 + RS5338 Unspecified
scaffold5835 159425 159524 + RS1 Unspecified
scaffold5835 159525 160238 + RS157 Unspecified
scaffold5835 160238 160340 + PL289 Unspecified
scaffold5835 160362 160583 - RS861 Unspecified
scaffold5835 160468 160652 + RS5338 Unspecified
scaffold5835 160875 161290 - RS370 Unspecified
scaffold5835 161480 161498 + (ACA)n Simple_repeat
scaffold5835 161868 161917 + (ATCC)n Simple_repeat
scaffold5835 162109 162200 + PL850 Unspecified
scaffold5835 162192 162282 + (ATT)n Simple_repeat
scaffold5835 162639 162893 + RS356 Unspecified
scaffold5835 163008 163063 + PL171 Unspecified
scaffold5835 163127 163267 - RS1072 Unspecified
scaffold5835 163175 163292 + RS10881 Unspecified
scaffold5835 163317 163582 - PL942 Unspecified
scaffold5835 165034 165064 + (T)n Simple_repeat
scaffold5835 165442 165479 + (TAA)n Simple_repeat
scaffold5835 165718 165766 + A-rich Low_complexity
scaffold5835 167416 167592 + RS8981 Unspecified
scaffold5835 167455 167661 - RS10995 Unspecified
scaffold5835 168444 168510 - RS18405 Unspecified
scaffold5835 168618 168639 + (A)n Simple_repeat
scaffold5835 168820 169058 + RS12305 Unspecified
scaffold5835 169084 169192 + RS10593 Unspecified
scaffold5835 169250 169453 + RS6141 Unspecified
scaffold5835 169353 169468 + RS16782 Unspecified
scaffold5835 169802 169833 + (T)n Simple_repeat
scaffold5835 170082 170831 + LINE LINE(TransposonPSI)
scaffold5835 171647 172335 + RS10246 Unspecified
scaffold5835 172339 172366 + (TTAGA)n Simple_repeat
scaffold5835 172481 172622 + RS6498 Unspecified
scaffold5835 172792 172919 + (A)n Simple_repeat
scaffold5835 172903 172919 + (A)n Simple_repeat
scaffold5835 173684 173701 + (T)n Simple_repeat
scaffold5835 174102 174119 + (TA)n Simple_repeat
scaffold5835 176592 176793 - PL874 Unspecified
scaffold5835 176792 177554 - RS1474 Unspecified
scaffold5835 177399 177861 + RS1245 Unspecified