scaffold5869 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold5869 |
1 |
375 |
+ |
PL647 |
Unspecified |
| scaffold5869 |
375 |
749 |
- |
RS2506 |
Unspecified |
| scaffold5869 |
864 |
1349 |
+ |
RS5117 |
Unspecified |
| scaffold5869 |
1350 |
1387 |
+ |
(TTA)n |
Simple_repeat |
| scaffold5869 |
1416 |
1460 |
+ |
(ATTTTT)n |
Simple_repeat |
| scaffold5869 |
1475 |
1620 |
- |
RS3423 |
Unspecified |
| scaffold5869 |
1492 |
1621 |
+ |
PL647 |
Unspecified |
| scaffold5869 |
1621 |
1995 |
- |
RS2506 |
Unspecified |
| scaffold5869 |
2110 |
2595 |
+ |
RS5117 |
Unspecified |
| scaffold5869 |
2596 |
2633 |
+ |
(TTA)n |
Simple_repeat |
| scaffold5869 |
2662 |
2706 |
+ |
(ATTTTT)n |
Simple_repeat |
| scaffold5869 |
3451 |
3585 |
- |
RS706 |
Unspecified |
| scaffold5869 |
4572 |
4614 |
+ |
(CT)n |
Simple_repeat |
| scaffold5869 |
4728 |
4873 |
+ |
A-rich |
Low_complexity |
| scaffold5869 |
4984 |
5012 |
+ |
(CGATCT)n |
Simple_repeat |
| scaffold5869 |
6063 |
6198 |
- |
RS1324 |
Unspecified |
| scaffold5869 |
6208 |
6238 |
+ |
(GACCC)n |
Simple_repeat |
| scaffold5869 |
9228 |
9269 |
- |
L1-5_STu |
LINE/L1 |
| scaffold5869 |
9636 |
9712 |
- |
L1-1_GM |
LINE/L1 |
| scaffold5869 |
9939 |
9964 |
+ |
(A)n |
Simple_repeat |
| scaffold5869 |
12077 |
12109 |
+ |
(T)n |
Simple_repeat |
| scaffold5869 |
12414 |
12441 |
+ |
(A)n |
Simple_repeat |
| scaffold5869 |
13719 |
13752 |
+ |
(TGA)n |
Simple_repeat |
| scaffold5869 |
15457 |
15520 |
- |
RS18405 |
Unspecified |
| scaffold5869 |
15599 |
15634 |
+ |
(A)n |
Simple_repeat |
| scaffold5869 |
15943 |
15967 |
+ |
(ATAA)n |
Simple_repeat |
| scaffold5869 |
15989 |
16251 |
+ |
RS356 |
Unspecified |
| scaffold5869 |
16364 |
16609 |
- |
RS15131 |
Unspecified |
| scaffold5869 |
17196 |
17230 |
+ |
(T)n |
Simple_repeat |
| scaffold5869 |
18039 |
18094 |
+ |
(TAT)n |
Simple_repeat |
| scaffold5869 |
18329 |
18360 |
+ |
(AATAA)n |
Simple_repeat |
| scaffold5869 |
18636 |
18692 |
+ |
A-rich |
Low_complexity |
| scaffold5869 |
19388 |
19431 |
+ |
(TTG)n |
Simple_repeat |
| scaffold5869 |
19593 |
20020 |
- |
PL39 |
Unspecified |
| scaffold5869 |
19939 |
20067 |
+ |
(TGG)n |
Simple_repeat |
| scaffold5869 |
20068 |
20134 |
- |
DNA3-11_Mad |
DNA/PIF-Harbinger |
| scaffold5869 |
20304 |
20343 |
+ |
(TAAT)n |
Simple_repeat |
| scaffold5869 |
20621 |
20658 |
+ |
(TA)n |
Simple_repeat |
| scaffold5869 |
21044 |
21135 |
- |
LT1_EPa |
LTR? |
| scaffold5869 |
21387 |
21403 |
+ |
(T)n |
Simple_repeat |
| scaffold5869 |
21485 |
21591 |
+ |
RS4475 |
Unspecified |
| scaffold5869 |
21855 |
22094 |
- |
RS4 |
Unspecified |
| scaffold5869 |
22519 |
22546 |
+ |
(T)n |
Simple_repeat |
| scaffold5869 |
22635 |
22719 |
+ |
(AATATCT)n |
Simple_repeat |
| scaffold5869 |
22973 |
23207 |
+ |
RS13794 |
Unspecified |
| scaffold5869 |
23298 |
23347 |
+ |
A-rich |
Low_complexity |
| scaffold5869 |
24331 |
24396 |
+ |
(ATTTAAT)n |
Simple_repeat |
| scaffold5869 |
24504 |
24635 |
+ |
(TTA)n |
Simple_repeat |
| scaffold5869 |
24631 |
25028 |
- |
RS29 |
Unspecified |
| scaffold5869 |
25237 |
25387 |
+ |
PL820 |
Unspecified |
| scaffold5869 |
25437 |
25908 |
+ |
PL188 |
Unspecified |
| scaffold5869 |
27405 |
27432 |
+ |
(TTGTT)n |
Simple_repeat |
| scaffold5869 |
27835 |
27884 |
+ |
(CAGAGG)n |
Simple_repeat |
| scaffold5869 |
28584 |
28620 |
+ |
(GAGCAG)n |
Simple_repeat |
| scaffold5869 |
29386 |
29548 |
+ |
RS7064 |
Unspecified |
| scaffold5869 |
29456 |
29644 |
- |
PL827 |
Unspecified |
| scaffold5869 |
29553 |
29859 |
- |
RS1094 |
Unspecified |
| scaffold5869 |
29734 |
29893 |
- |
RS1094 |
Unspecified |
| scaffold5869 |
30116 |
30142 |
- |
Copia-3_SL-I |
LTR/Copia |
| scaffold5869 |
30143 |
30221 |
- |
ATGP5A_I-int |
LTR/Gypsy |
| scaffold5869 |
30222 |
30236 |
- |
Copia-3_SL-I |
LTR/Copia |
| scaffold5869 |
30515 |
31642 |
- |
gypsy |
gypsy(TransposonPSI) |
| scaffold5869 |
30551 |
31275 |
- |
Gypsy-9_TA-I |
LTR/Gypsy |
| scaffold5869 |
31738 |
31869 |
- |
Gypsy-52_Mad-I |
LTR/Gypsy |
| scaffold5869 |
31921 |
33324 |
- |
gypsy |
gypsy(TransposonPSI) |
| scaffold5869 |
31949 |
33294 |
- |
Gypsy-52_Mad-I |
LTR/Gypsy |
| scaffold5869 |
34447 |
34508 |
+ |
(TTG)n |
Simple_repeat |