scaffold5978 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold5978 |
1921 |
2438 |
- |
MuDR3_ZM |
DNA/MULE-MuDR |
| scaffold5978 |
3417 |
3515 |
+ |
A-rich |
Low_complexity |
| scaffold5978 |
3904 |
3929 |
+ |
(T)n |
Simple_repeat |
| scaffold5978 |
5628 |
5896 |
+ |
RS5409 |
Unspecified |
| scaffold5978 |
6106 |
6278 |
+ |
RS5409 |
Unspecified |
| scaffold5978 |
8446 |
8489 |
+ |
(TA)n |
Simple_repeat |
| scaffold5978 |
8635 |
8652 |
+ |
(TA)n |
Simple_repeat |
| scaffold5978 |
8668 |
8695 |
+ |
Gypsy-16_Mad-I |
LTR/Gypsy |
| scaffold5978 |
8675 |
8744 |
+ |
Gypsy-140_SBi-I |
LTR/Gypsy |
| scaffold5978 |
11982 |
12023 |
+ |
Gypsy-9_Mad-I |
LTR/Gypsy |
| scaffold5978 |
12416 |
13551 |
+ |
(TA)n |
Simple_repeat |
| scaffold5978 |
13524 |
13551 |
+ |
(TA)n |
Simple_repeat |
| scaffold5978 |
14476 |
14516 |
+ |
(TTTG)n |
Simple_repeat |
| scaffold5978 |
15144 |
15244 |
+ |
PL296 |
Unspecified |
| scaffold5978 |
15232 |
15781 |
- |
PL473 |
Unspecified |
| scaffold5978 |
16217 |
16267 |
+ |
GA-rich |
Low_complexity |
| scaffold5978 |
16725 |
16759 |
+ |
(TATATTT)n |
Simple_repeat |
| scaffold5978 |
16899 |
16955 |
+ |
(TTTTTAA)n |
Simple_repeat |
| scaffold5978 |
17321 |
17378 |
+ |
(TGG)n |
Simple_repeat |
| scaffold5978 |
17661 |
17808 |
+ |
(ATTAAT)n |
Simple_repeat |
| scaffold5978 |
17812 |
17843 |
+ |
(A)n |
Simple_repeat |
| scaffold5978 |
18577 |
18727 |
+ |
RS319 |
Unspecified |
| scaffold5978 |
18701 |
18750 |
+ |
RS319 |
Unspecified |
| scaffold5978 |
19220 |
19418 |
+ |
RS319 |
Unspecified |
| scaffold5978 |
19364 |
19683 |
+ |
RS319 |
Unspecified |
| scaffold5978 |
19413 |
19683 |
- |
PL198 |
Unspecified |
| scaffold5978 |
20342 |
20411 |
+ |
A-rich |
Low_complexity |
| scaffold5978 |
20577 |
20642 |
+ |
(CATAA)n |
Simple_repeat |
| scaffold5978 |
22922 |
22957 |
+ |
A-rich |
Low_complexity |
| scaffold5978 |
23130 |
23183 |
+ |
(AAT)n |
Simple_repeat |
| scaffold5978 |
23744 |
23796 |
+ |
(CATAATA)n |
Simple_repeat |
| scaffold5978 |
24034 |
24264 |
- |
PL461 |
Unspecified |
| scaffold5978 |
24264 |
25009 |
+ |
RS369 |
Unspecified |
| scaffold5978 |
25551 |
25694 |
+ |
RS1096 |
Unspecified |
| scaffold5978 |
25568 |
25702 |
- |
RS51 |
Unspecified |
| scaffold5978 |
26335 |
26485 |
- |
RS1096 |
Unspecified |
| scaffold5978 |
26915 |
27822 |
- |
RS658 |
Unspecified |
| scaffold5978 |
27822 |
29078 |
+ |
RS288 |
Unspecified |
| scaffold5978 |
29128 |
30268 |
- |
RS934 |
Unspecified |
| scaffold5978 |
29259 |
29303 |
+ |
A-rich |
Low_complexity |
| scaffold5978 |
29304 |
30722 |
+ |
RS1496 |
Unspecified |
| scaffold5978 |
32189 |
32261 |
+ |
(AACAC)n |
Simple_repeat |
| scaffold5978 |
32423 |
34213 |
+ |
gypsy |
gypsy(TransposonPSI) |
| scaffold5978 |
32455 |
32499 |
+ |
Gypsy-18_SMo-I |
LTR/Gypsy |
| scaffold5978 |
32472 |
34046 |
+ |
Gypsy-53_GM-I |
LTR/Gypsy |
| scaffold5978 |
34607 |
35594 |
+ |
Ogre-VP1_I-int |
LTR/Gypsy |
| scaffold5978 |
35645 |
35677 |
+ |
(CAAA)n |
Simple_repeat |
| scaffold5978 |
35684 |
35730 |
+ |
Gypsy-10_Pru-LTR |
LTR/Gypsy |
| scaffold5978 |
35747 |
35801 |
+ |
Gypsy-51_Mad-LTR |
LTR/Gypsy |
| scaffold5978 |
35816 |
35871 |
+ |
Gypsy-10_Pru-LTR |
LTR/Gypsy |
| scaffold5978 |
37270 |
37724 |
+ |
RS225 |
Unspecified |
| scaffold5978 |
37722 |
38118 |
- |
RS413 |
Unspecified |
| scaffold5978 |
38446 |
38501 |
+ |
(CAAGCA)n |
Simple_repeat |
| scaffold5978 |
38524 |
40403 |
- |
RS658 |
Unspecified |
| scaffold5978 |
40844 |
40866 |
+ |
(TAAA)n |
Simple_repeat |
| scaffold5978 |
41947 |
42036 |
+ |
LTR-7_Mad-LTR |
LTR |
| scaffold5978 |
42540 |
42565 |
+ |
(T)n |
Simple_repeat |
| scaffold5978 |
42728 |
42754 |
+ |
A-rich |
Low_complexity |
| scaffold5978 |
42893 |
43192 |
+ |
RS580 |
Unspecified |
| scaffold5978 |
43453 |
43831 |
+ |
PL632 |
Unspecified |
| scaffold5978 |
44818 |
44872 |
+ |
(GTGCTT)n |
Simple_repeat |
| scaffold5978 |
47729 |
48180 |
+ |
RS374 |
Unspecified |
| scaffold5978 |
50668 |
50686 |
+ |
(CAA)n |
Simple_repeat |
| scaffold5978 |
50721 |
50769 |
+ |
(TTTGTA)n |
Simple_repeat |
| scaffold5978 |
51502 |
51543 |
+ |
A-rich |
Low_complexity |
| scaffold5978 |
51780 |
51842 |
+ |
(CAT)n |
Simple_repeat |
| scaffold5978 |
52007 |
52620 |
- |
PIGY-I_PS |
LTR/Gypsy |
| scaffold5978 |
53302 |
53338 |
+ |
(TTG)n |
Simple_repeat |
| scaffold5978 |
54770 |
54813 |
+ |
A-rich |
Low_complexity |
| scaffold5978 |
55617 |
55655 |
+ |
(TTTC)n |
Simple_repeat |
| scaffold5978 |
56820 |
56856 |
+ |
(TTTTG)n |
Simple_repeat |
| scaffold5978 |
57309 |
58293 |
- |
Gypsy-23_VV-I |
LTR/Gypsy |
| scaffold5978 |
58835 |
59824 |
- |
Gypsy-23_VV-I |
LTR/Gypsy |
| scaffold5978 |
60348 |
61178 |
- |
PL59 |
Unspecified |
| scaffold5978 |
60442 |
61355 |
- |
RS616 |
Unspecified |
| scaffold5978 |
61585 |
61670 |
+ |
MEGY-I_MT |
LTR/Gypsy |
| scaffold5978 |
61837 |
61998 |
+ |
MEGY-I_MT |
LTR/Gypsy |
| scaffold5978 |
62312 |
62820 |
+ |
RS3329 |
Unspecified |
| scaffold5978 |
62923 |
63461 |
+ |
MEGY-I_MT |
LTR/Gypsy |
| scaffold5978 |
63448 |
64476 |
- |
RS1819 |
Unspecified |
| scaffold5978 |
64450 |
64885 |
- |
PL755 |
Unspecified |
| scaffold5978 |
64517 |
64885 |
- |
PL491 |
Unspecified |
| scaffold5978 |
65346 |
65390 |
+ |
MEGY-I_MT |
LTR/Gypsy |
| scaffold5978 |
65930 |
65981 |
+ |
(GTTTTA)n |
Simple_repeat |
| scaffold5978 |
67805 |
67843 |
+ |
(GGCC)n |
Simple_repeat |
| scaffold5978 |
68172 |
68223 |
- |
MEGY-I_MT |
LTR/Gypsy |
| scaffold5978 |
68467 |
68522 |
+ |
(TTTTC)n |
Simple_repeat |
| scaffold5978 |
68859 |
68926 |
- |
PL78 |
Unspecified |
| scaffold5978 |
69246 |
69265 |
+ |
(CCGG)n |
Simple_repeat |
| scaffold5978 |
69481 |
69562 |
- |
GYPSHAN_I_MT-int |
LTR/Gypsy |
| scaffold5978 |
69871 |
71560 |
- |
Copia-13_SB-I |
LTR/Copia |
| scaffold5978 |
70083 |
71560 |
- |
Copia-13_SB-I |
LTR/Copia |
| scaffold5978 |
71729 |
72220 |
- |
Copia-13_SB-I |
LTR/Copia |