scaffold6031 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold6031 |
102 |
276 |
+ |
RS275 |
Unspecified |
| scaffold6031 |
1012 |
1281 |
- |
RS82 |
Unspecified |
| scaffold6031 |
1514 |
1735 |
- |
RS12335 |
Unspecified |
| scaffold6031 |
1765 |
1982 |
- |
RS7569 |
Unspecified |
| scaffold6031 |
2023 |
2041 |
+ |
(AAT)n |
Simple_repeat |
| scaffold6031 |
2042 |
2111 |
+ |
(ACA)n |
Simple_repeat |
| scaffold6031 |
2112 |
2158 |
+ |
(AAT)n |
Simple_repeat |
| scaffold6031 |
2623 |
2671 |
+ |
(AT)n |
Simple_repeat |
| scaffold6031 |
2878 |
3094 |
- |
RS7569 |
Unspecified |
| scaffold6031 |
3129 |
3179 |
+ |
(AAT)n |
Simple_repeat |
| scaffold6031 |
3360 |
3401 |
+ |
RS6881 |
Unspecified |
| scaffold6031 |
4454 |
4495 |
+ |
(ATTTT)n |
Simple_repeat |
| scaffold6031 |
4735 |
4967 |
- |
RS7068 |
Unspecified |
| scaffold6031 |
5373 |
5418 |
+ |
A-rich |
Low_complexity |
| scaffold6031 |
5513 |
5550 |
+ |
(T)n |
Simple_repeat |
| scaffold6031 |
5782 |
5886 |
+ |
RS361 |
Unspecified |
| scaffold6031 |
6886 |
6955 |
+ |
PL357 |
Unspecified |
| scaffold6031 |
7187 |
7293 |
- |
RS4475 |
Unspecified |
| scaffold6031 |
7200 |
7293 |
+ |
RS16382 |
Unspecified |
| scaffold6031 |
8177 |
8315 |
- |
RS1 |
Unspecified |
| scaffold6031 |
8655 |
8671 |
+ |
(A)n |
Simple_repeat |
| scaffold6031 |
8679 |
8711 |
+ |
(TTAT)n |
Simple_repeat |
| scaffold6031 |
8679 |
8792 |
+ |
(TTAT)n |
Simple_repeat |
| scaffold6031 |
8705 |
8792 |
+ |
RS8 |
Unspecified |
| scaffold6031 |
8943 |
8984 |
+ |
(TCA)n |
Simple_repeat |
| scaffold6031 |
9165 |
10115 |
+ |
Copia-21_Pru-I |
LTR/Copia |
| scaffold6031 |
10116 |
10297 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold6031 |
10444 |
10485 |
+ |
(TCA)n |
Simple_repeat |
| scaffold6031 |
10666 |
11862 |
+ |
ATCopia90_I-int |
LTR/Copia |
| scaffold6031 |
12012 |
12053 |
+ |
(TCA)n |
Simple_repeat |
| scaffold6031 |
12554 |
12576 |
+ |
(A)n |
Simple_repeat |
| scaffold6031 |
13577 |
13636 |
+ |
(ATT)n |
Simple_repeat |
| scaffold6031 |
13634 |
14202 |
- |
RS2390 |
Unspecified |
| scaffold6031 |
14676 |
14996 |
- |
RS4066 |
Unspecified |
| scaffold6031 |
14736 |
14986 |
+ |
RS3108 |
Unspecified |
| scaffold6031 |
16697 |
16734 |
+ |
(TTA)n |
Simple_repeat |
| scaffold6031 |
17057 |
17081 |
+ |
(ATT)n |
Simple_repeat |
| scaffold6031 |
17318 |
17687 |
- |
RS2390 |
Unspecified |
| scaffold6031 |
17685 |
17726 |
+ |
(ATT)n |
Simple_repeat |
| scaffold6031 |
17839 |
17935 |
+ |
(TAT)n |
Simple_repeat |
| scaffold6031 |
17949 |
18167 |
+ |
PL329 |
Unspecified |
| scaffold6031 |
18498 |
18540 |
+ |
A-rich |
Low_complexity |
| scaffold6031 |
18822 |
18966 |
- |
RS742 |
Unspecified |
| scaffold6031 |
19551 |
19570 |
+ |
A-rich |
Low_complexity |
| scaffold6031 |
19571 |
19614 |
+ |
(AAT)n |
Simple_repeat |
| scaffold6031 |
19615 |
19629 |
+ |
A-rich |
Low_complexity |
| scaffold6031 |
21602 |
21656 |
+ |
A-rich |
Low_complexity |
| scaffold6031 |
21845 |
21885 |
+ |
(T)n |
Simple_repeat |
| scaffold6031 |
22542 |
22620 |
+ |
G-rich |
Low_complexity |
| scaffold6031 |
22738 |
22808 |
+ |
A-rich |
Low_complexity |
| scaffold6031 |
23264 |
23327 |
+ |
(GGTCCG)n |
Simple_repeat |
| scaffold6031 |
23418 |
24414 |
- |
PL599 |
Unspecified |
| scaffold6031 |
24415 |
24464 |
+ |
G-rich |
Low_complexity |
| scaffold6031 |
24749 |
24785 |
+ |
(A)n |
Simple_repeat |
| scaffold6031 |
25434 |
25459 |
+ |
(TCATT)n |
Simple_repeat |
| scaffold6031 |
26023 |
26185 |
+ |
RS4518 |
Unspecified |
| scaffold6031 |
26279 |
27987 |
- |
Copia-79_ST-I |
LTR/Copia |
| scaffold6031 |
28246 |
30000 |
- |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold6031 |
28276 |
29139 |
- |
Copia-79_ST-I |
LTR/Copia |
| scaffold6031 |
29350 |
29485 |
- |
Copia-79_ST-I |
LTR/Copia |
| scaffold6031 |
29586 |
29653 |
- |
Copia-79_ST-I |
LTR/Copia |
| scaffold6031 |
29812 |
30753 |
- |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold6031 |
30822 |
30881 |
+ |
A-rich |
Low_complexity |
| scaffold6031 |
32875 |
32945 |
- |
RS8099 |
Unspecified |
| scaffold6031 |
33794 |
34038 |
- |
RS1934 |
Unspecified |
| scaffold6031 |
34174 |
34691 |
- |
RS1053 |
Unspecified |
| scaffold6031 |
34692 |
34999 |
- |
RS1934 |
Unspecified |
| scaffold6031 |
34803 |
35422 |
- |
RS3643 |
Unspecified |
| scaffold6031 |
35423 |
35462 |
- |
RS3643 |
Unspecified |
| scaffold6031 |
35511 |
35586 |
+ |
G-rich |
Low_complexity |
| scaffold6031 |
35618 |
35689 |
+ |
(TTTTA)n |
Simple_repeat |
| scaffold6031 |
35690 |
36135 |
+ |
PL567 |
Unspecified |
| scaffold6031 |
36131 |
36257 |
- |
PL779 |
Unspecified |
| scaffold6031 |
36258 |
36390 |
- |
RS1420 |
Unspecified |
| scaffold6031 |
36391 |
36516 |
- |
RS1420 |
Unspecified |
| scaffold6031 |
36521 |
36574 |
- |
RS2795 |
Unspecified |
| scaffold6031 |
37068 |
37090 |
+ |
(ATGA)n |
Simple_repeat |
| scaffold6031 |
37191 |
38790 |
- |
Copia-40_Pru-I |
LTR/Copia |
| scaffold6031 |
39236 |
40105 |
- |
Copia-40_Pru-I |
LTR/Copia |
| scaffold6031 |
40229 |
40417 |
- |
Copia-40_Pru-I |
LTR/Copia |
| scaffold6031 |
40503 |
40585 |
- |
Copia-40_Pru-I |
LTR/Copia |
| scaffold6031 |
40524 |
40632 |
+ |
Copia1-PTR_I-int |
LTR/Copia |
| scaffold6031 |
40910 |
41491 |
- |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold6031 |
43103 |
43371 |
- |
RS514 |
Unspecified |
| scaffold6031 |
43535 |
43859 |
+ |
RS4686 |
Unspecified |
| scaffold6031 |
43731 |
44148 |
+ |
PL143 |
Unspecified |