scaffold605 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold605 |
606 |
653 |
- |
PL188 |
Unspecified |
| scaffold605 |
3258 |
3356 |
+ |
RS3558 |
Unspecified |
| scaffold605 |
3479 |
3596 |
- |
RS15138 |
Unspecified |
| scaffold605 |
3499 |
3782 |
+ |
RS1 |
Unspecified |
| scaffold605 |
3772 |
3831 |
- |
RS1035 |
Unspecified |
| scaffold605 |
4379 |
4464 |
+ |
Copia-3_PTri-I |
LTR/Copia |
| scaffold605 |
4468 |
4671 |
+ |
RS1403 |
Unspecified |
| scaffold605 |
4672 |
4869 |
+ |
Copia-3_PTri-I |
LTR/Copia |
| scaffold605 |
7394 |
7428 |
- |
HAT-N10_Mad |
DNA/hAT-Ac |
| scaffold605 |
7758 |
7946 |
+ |
RS82 |
Unspecified |
| scaffold605 |
8077 |
8119 |
+ |
(CACCACC)n |
Simple_repeat |
| scaffold605 |
8449 |
8484 |
+ |
A-rich |
Low_complexity |
| scaffold605 |
8931 |
8975 |
- |
HAT-N11_Mad |
DNA/hAT-Ac |
| scaffold605 |
9429 |
9492 |
+ |
(TCTATTTT)n |
Simple_repeat |
| scaffold605 |
19684 |
19714 |
+ |
(TTCAT)n |
Simple_repeat |
| scaffold605 |
20254 |
20289 |
+ |
(GATAATA)n |
Simple_repeat |
| scaffold605 |
25326 |
25384 |
+ |
(TCATTTT)n |
Simple_repeat |
| scaffold605 |
25605 |
25680 |
+ |
PL622 |
Unspecified |
| scaffold605 |
25667 |
25886 |
- |
RS894 |
Unspecified |
| scaffold605 |
25875 |
26038 |
- |
RS894 |
Unspecified |
| scaffold605 |
26069 |
26255 |
+ |
PL622 |
Unspecified |
| scaffold605 |
26601 |
26710 |
- |
RS12517 |
Unspecified |
| scaffold605 |
26891 |
26973 |
+ |
(ATA)n |
Simple_repeat |
| scaffold605 |
27605 |
27711 |
- |
PL754 |
Unspecified |
| scaffold605 |
27606 |
27700 |
+ |
RS4475 |
Unspecified |
| scaffold605 |
27839 |
27875 |
+ |
A-rich |
Low_complexity |
| scaffold605 |
28102 |
28159 |
+ |
(CATTT)n |
Simple_repeat |
| scaffold605 |
28294 |
28322 |
+ |
(CGG)n |
Simple_repeat |
| scaffold605 |
39454 |
39482 |
+ |
(TTA)n |
Simple_repeat |
| scaffold605 |
40012 |
40063 |
+ |
ATLINEIII |
LINE/L1 |
| scaffold605 |
40032 |
40174 |
- |
EnSpm-9_STu |
DNA/CMC-EnSpm |
| scaffold605 |
41328 |
41354 |
+ |
(T)n |
Simple_repeat |
| scaffold605 |
42635 |
42660 |
+ |
(T)n |
Simple_repeat |
| scaffold605 |
44868 |
44894 |
+ |
(A)n |
Simple_repeat |
| scaffold605 |
51019 |
51048 |
+ |
(GAAGA)n |
Simple_repeat |
| scaffold605 |
51048 |
51072 |
+ |
(GT)n |
Simple_repeat |
| scaffold605 |
51168 |
51178 |
+ |
(TATT)n |
Simple_repeat |
| scaffold605 |
51179 |
51225 |
+ |
(TTA)n |
Simple_repeat |
| scaffold605 |
51456 |
51546 |
- |
RS3380 |
Unspecified |
| scaffold605 |
51466 |
51691 |
+ |
RS376 |
Unspecified |
| scaffold605 |
52118 |
52215 |
- |
RS4475 |
Unspecified |
| scaffold605 |
53181 |
53229 |
+ |
A-rich |
Low_complexity |
| scaffold605 |
53851 |
53892 |
+ |
(ATT)n |
Simple_repeat |
| scaffold605 |
54159 |
54204 |
+ |
(CTAATAT)n |
Simple_repeat |
| scaffold605 |
54204 |
54464 |
+ |
RS2064 |
Unspecified |
| scaffold605 |
54471 |
54500 |
+ |
(TTAAT)n |
Simple_repeat |
| scaffold605 |
54556 |
54611 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold605 |
55142 |
55160 |
+ |
(T)n |
Simple_repeat |
| scaffold605 |
55198 |
55309 |
+ |
RS2734 |
Unspecified |
| scaffold605 |
55348 |
55458 |
- |
RS2734 |
Unspecified |
| scaffold605 |
56574 |
56674 |
+ |
RS12254 |
Unspecified |
| scaffold605 |
56601 |
56787 |
+ |
RS18 |
Unspecified |
| scaffold605 |
56950 |
56985 |
+ |
A-rich |
Low_complexity |
| scaffold605 |
57133 |
57374 |
+ |
RS4 |
Unspecified |
| scaffold605 |
57428 |
57488 |
+ |
ATENSPM1A |
DNA/CMC-EnSpm |
| scaffold605 |
57617 |
57700 |
+ |
(T)n |
Simple_repeat |
| scaffold605 |
58518 |
58567 |
+ |
A-rich |
Low_complexity |
| scaffold605 |
59447 |
59486 |
+ |
(AT)n |
Simple_repeat |
| scaffold605 |
61820 |
61861 |
+ |
(TTTCTA)n |
Simple_repeat |
| scaffold605 |
61862 |
61867 |
+ |
(TTTTCTA)n |
Simple_repeat |
| scaffold605 |
62066 |
62091 |
+ |
(A)n |
Simple_repeat |
| scaffold605 |
63697 |
63725 |
+ |
(TTCAA)n |
Simple_repeat |
| scaffold605 |
64448 |
64858 |
+ |
(GGT)n |
Simple_repeat |
| scaffold605 |
64771 |
64858 |
+ |
(GGT)n |
Simple_repeat |
| scaffold605 |
64911 |
65005 |
+ |
(T)n |
Simple_repeat |
| scaffold605 |
65015 |
65045 |
+ |
GA-rich |
Low_complexity |
| scaffold605 |
65882 |
65911 |
+ |
(A)n |
Simple_repeat |
| scaffold605 |
66221 |
66261 |
+ |
(TAT)n |
Simple_repeat |
| scaffold605 |
66627 |
67254 |
+ |
RS992 |
Unspecified |
| scaffold605 |
67153 |
67375 |
+ |
RS5602 |
Unspecified |
| scaffold605 |
67244 |
67397 |
- |
RS992 |
Unspecified |
| scaffold605 |
72408 |
72442 |
+ |
(A)n |
Simple_repeat |
| scaffold605 |
72634 |
72669 |
+ |
(A)n |
Simple_repeat |
| scaffold605 |
76014 |
76050 |
+ |
(ATAA)n |
Simple_repeat |
| scaffold605 |
77172 |
77255 |
+ |
(ATTAA)n |
Simple_repeat |
| scaffold605 |
77775 |
77835 |
+ |
A-rich |
Low_complexity |
| scaffold605 |
77991 |
78103 |
- |
RS209 |
Unspecified |
| scaffold605 |
78901 |
78943 |
+ |
(ATGTAG)n |
Simple_repeat |
| scaffold605 |
79403 |
79436 |
+ |
(AATT)n |
Simple_repeat |
| scaffold605 |
79462 |
79549 |
+ |
(TTTTTT)n |
Simple_repeat |
| scaffold605 |
79550 |
79560 |
+ |
(ATTT)n |
Simple_repeat |
| scaffold605 |
79566 |
79666 |
+ |
(GGC)n |
Simple_repeat |
| scaffold605 |
80132 |
80182 |
+ |
(GGTGGAGA)n |
Simple_repeat |
| scaffold605 |
80235 |
80380 |
+ |
RS3521 |
Unspecified |
| scaffold605 |
80445 |
80591 |
- |
RS407 |
Unspecified |
| scaffold605 |
83268 |
83299 |
+ |
(T)n |
Simple_repeat |
| scaffold605 |
83300 |
83345 |
+ |
(TG)n |
Simple_repeat |
| scaffold605 |
86808 |
86843 |
+ |
(TTTTA)n |
Simple_repeat |
| scaffold605 |
87892 |
88074 |
- |
RS38 |
Unspecified |
| scaffold605 |
88147 |
88185 |
+ |
A-rich |
Low_complexity |
| scaffold605 |
88783 |
88891 |
+ |
RS606 |
Unspecified |
| scaffold605 |
89354 |
89471 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold605 |
89501 |
89556 |
+ |
(GTTCA)n |
Simple_repeat |
| scaffold605 |
90384 |
90419 |
+ |
(AATA)n |
Simple_repeat |
| scaffold605 |
92565 |
92593 |
+ |
(T)n |
Simple_repeat |
| scaffold605 |
93238 |
93368 |
- |
RS2291 |
Unspecified |
| scaffold605 |
93367 |
93611 |
+ |
RS581 |
Unspecified |
| scaffold605 |
93609 |
93932 |
- |
RS2291 |
Unspecified |
| scaffold605 |
93972 |
93998 |
+ |
(A)n |
Simple_repeat |
| scaffold605 |
102789 |
102926 |
+ |
(AACTG)n |
Simple_repeat |
| scaffold605 |
104528 |
104603 |
+ |
(ATTA)n |
Simple_repeat |
| scaffold605 |
105014 |
105079 |
+ |
RS614 |
Unspecified |
| scaffold605 |
105050 |
105256 |
+ |
RS614 |
Unspecified |
| scaffold605 |
105138 |
105278 |
- |
RS16668 |
Unspecified |
| scaffold605 |
106615 |
106642 |
+ |
(T)n |
Simple_repeat |
| scaffold605 |
106643 |
106685 |
+ |
(ATTT)n |
Simple_repeat |
| scaffold605 |
107402 |
107456 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold605 |
108041 |
108208 |
+ |
(TCGGG)n |
Simple_repeat |
| scaffold605 |
108118 |
108240 |
+ |
ATREP10A |
RC/Helitron |
| scaffold605 |
108365 |
108508 |
+ |
(TCGGG)n |
Simple_repeat |
| scaffold605 |
108544 |
108576 |
+ |
(CAAGC)n |
Simple_repeat |
| scaffold605 |
110022 |
110062 |
+ |
(AAG)n |
Simple_repeat |
| scaffold605 |
113154 |
113632 |
- |
RS4683 |
Unspecified |
| scaffold605 |
113580 |
113760 |
- |
RS10531 |
Unspecified |
| scaffold605 |
116693 |
116928 |
+ |
RS2135 |
Unspecified |
| scaffold605 |
117046 |
117082 |
+ |
A-rich |
Low_complexity |
| scaffold605 |
117272 |
117289 |
+ |
(A)n |
Simple_repeat |
| scaffold605 |
117644 |
117678 |
+ |
(ATTAGTT)n |
Simple_repeat |
| scaffold605 |
118064 |
118239 |
+ |
RS163 |
Unspecified |
| scaffold605 |
118260 |
118304 |
+ |
RS163 |
Unspecified |
| scaffold605 |
118746 |
118792 |
+ |
(TAA)n |
Simple_repeat |
| scaffold605 |
119045 |
119308 |
+ |
RS68 |
Unspecified |
| scaffold605 |
119608 |
119638 |
+ |
(T)n |
Simple_repeat |
| scaffold605 |
121127 |
121577 |
+ |
PL352 |
Unspecified |
| scaffold605 |
122049 |
122106 |
+ |
A-rich |
Low_complexity |
| scaffold605 |
122108 |
122213 |
+ |
RS4475 |
Unspecified |
| scaffold605 |
123498 |
123539 |
+ |
(AATT)n |
Simple_repeat |
| scaffold605 |
124756 |
124853 |
- |
RS4475 |
Unspecified |
| scaffold605 |
125451 |
125485 |
+ |
A-rich |
Low_complexity |
| scaffold605 |
126023 |
126045 |
+ |
(A)n |
Simple_repeat |
| scaffold605 |
126204 |
126566 |
+ |
RS739 |
Unspecified |
| scaffold605 |
126692 |
126792 |
+ |
(T)n |
Simple_repeat |
| scaffold605 |
127205 |
127243 |
+ |
(TTATCAT)n |
Simple_repeat |
| scaffold605 |
127906 |
128300 |
+ |
RS626 |
Unspecified |
| scaffold605 |
128302 |
128945 |
+ |
RS623 |
Unspecified |
| scaffold605 |
128972 |
129049 |
- |
RS4475 |
Unspecified |
| scaffold605 |
129048 |
129636 |
- |
PL288 |
Unspecified |
| scaffold605 |
130133 |
130152 |
+ |
(T)n |
Simple_repeat |
| scaffold605 |
130726 |
131100 |
- |
PL886 |
Unspecified |
| scaffold605 |
131100 |
131634 |
+ |
RS693 |
Unspecified |
| scaffold605 |
131732 |
131808 |
+ |
(ATTTGT)n |
Simple_repeat |
| scaffold605 |
133034 |
133671 |
- |
Gypsy-25_ST-I |
LTR/Gypsy |
| scaffold605 |
133533 |
133697 |
+ |
RS41 |
Unspecified |
| scaffold605 |
133721 |
133739 |
+ |
(A)n |
Simple_repeat |
| scaffold605 |
133917 |
133948 |
+ |
(TAAAC)n |
Simple_repeat |
| scaffold605 |
134654 |
134789 |
+ |
(CTACTC)n |
Simple_repeat |
| scaffold605 |
134960 |
135212 |
- |
RS5201 |
Unspecified |
| scaffold605 |
136504 |
136779 |
+ |
RS9845 |
Unspecified |
| scaffold605 |
136798 |
137013 |
+ |
RS10626 |
Unspecified |
| scaffold605 |
137061 |
137384 |
+ |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold605 |
137366 |
137549 |
+ |
PL189 |
Unspecified |
| scaffold605 |
138146 |
138180 |
+ |
(GCCG)n |
Simple_repeat |
| scaffold605 |
138718 |
138844 |
+ |
Copia-65_ST-I |
LTR/Copia |
| scaffold605 |
139302 |
139528 |
+ |
Copia-65_ST-I |
LTR/Copia |
| scaffold605 |
139713 |
140617 |
+ |
Copia-7_CP-I |
LTR/Copia |
| scaffold605 |
140802 |
140849 |
+ |
GA-rich |
Low_complexity |
| scaffold605 |
141033 |
142622 |
+ |
Copia-7_CP-I |
LTR/Copia |
| scaffold605 |
142621 |
142897 |
+ |
RS9845 |
Unspecified |
| scaffold605 |
142916 |
142965 |
+ |
RS10626 |
Unspecified |
| scaffold605 |
146803 |
147063 |
+ |
RS365 |
Unspecified |
| scaffold605 |
148642 |
148737 |
- |
RS4475 |
Unspecified |
| scaffold605 |
148904 |
148985 |
+ |
RS4475 |
Unspecified |
| scaffold605 |
149339 |
149481 |
+ |
RS38 |
Unspecified |
| scaffold605 |
149651 |
149671 |
+ |
(T)n |
Simple_repeat |
| scaffold605 |
149944 |
149996 |
+ |
(TAA)n |
Simple_repeat |
| scaffold605 |
150078 |
150094 |
+ |
(TAA)n |
Simple_repeat |
| scaffold605 |
150167 |
150487 |
- |
RS5090 |
Unspecified |
| scaffold605 |
150657 |
150710 |
+ |
(TTAT)n |
Simple_repeat |
| scaffold605 |
150965 |
151111 |
+ |
RS5090 |
Unspecified |
| scaffold605 |
155447 |
155468 |
+ |
(AC)n |
Simple_repeat |
| scaffold605 |
155469 |
155529 |
+ |
(AACAA)n |
Simple_repeat |
| scaffold605 |
159724 |
160001 |
+ |
RS1101 |
Unspecified |
| scaffold605 |
160191 |
160461 |
+ |
RS1101 |
Unspecified |
| scaffold605 |
164720 |
164950 |
+ |
RS18 |
Unspecified |
| scaffold605 |
167245 |
167283 |
+ |
(TACAAC)n |
Simple_repeat |
| scaffold605 |
167901 |
167931 |
+ |
A-rich |
Low_complexity |
| scaffold605 |
169840 |
169953 |
- |
RS5752 |
Unspecified |
| scaffold605 |
170205 |
170343 |
- |
RS5752 |
Unspecified |
| scaffold605 |
170621 |
170644 |
+ |
(GCT)n |
Simple_repeat |
| scaffold605 |
170789 |
170834 |
+ |
(GCG)n |
Simple_repeat |
| scaffold605 |
170872 |
170906 |
+ |
GA-rich |
Low_complexity |
| scaffold605 |
171040 |
171067 |
+ |
(GCG)n |
Simple_repeat |
| scaffold605 |
171117 |
171159 |
+ |
(GGT)n |
Simple_repeat |
| scaffold605 |
171191 |
171225 |
+ |
(GTTTTG)n |
Simple_repeat |
| scaffold605 |
171357 |
171389 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold605 |
171688 |
171731 |
+ |
A-rich |
Low_complexity |
| scaffold605 |
171975 |
172207 |
+ |
(CCCGA)n |
Simple_repeat |
| scaffold605 |
172401 |
172655 |
+ |
EnSpm1_TM |
DNA/CMC-EnSpm |
| scaffold605 |
172413 |
172667 |
+ |
(CCCGA)n |
Simple_repeat |
| scaffold605 |
173402 |
173514 |
- |
RS285 |
Unspecified |
| scaffold605 |
174845 |
174923 |
+ |
(AATCCAT)n |
Simple_repeat |
| scaffold605 |
176520 |
176611 |
+ |
LTR-7_Mad-LTR |
LTR |
| scaffold605 |
176896 |
176970 |
+ |
RS6470 |
Unspecified |
| scaffold605 |
178298 |
178357 |
+ |
(TTAT)n |
Simple_repeat |
| scaffold605 |
178930 |
178951 |
+ |
(T)n |
Simple_repeat |
| scaffold605 |
178952 |
178964 |
+ |
(ATTTTTA)n |
Simple_repeat |
| scaffold605 |
179112 |
179157 |
+ |
(A)n |
Simple_repeat |
| scaffold605 |
179158 |
179179 |
+ |
A-rich |
Low_complexity |
| scaffold605 |
179367 |
179396 |
+ |
A-rich |
Low_complexity |
| scaffold605 |
179516 |
179536 |
+ |
(ACC)n |
Simple_repeat |
| scaffold605 |
181984 |
182014 |
- |
Gypsy-2_PD-I |
LTR/Gypsy |
| scaffold605 |
183969 |
184027 |
+ |
RS2386 |
Unspecified |
| scaffold605 |
184023 |
184071 |
+ |
RS2386 |
Unspecified |
| scaffold605 |
184269 |
184374 |
- |
Copia-3_PTri-I |
LTR/Copia |
| scaffold605 |
186734 |
186772 |
+ |
A-rich |
Low_complexity |
| scaffold605 |
189313 |
189368 |
+ |
A-rich |
Low_complexity |
| scaffold605 |
189469 |
189501 |
+ |
(TAAGTG)n |
Simple_repeat |
| scaffold605 |
189801 |
189848 |
+ |
(TTATT)n |
Simple_repeat |
| scaffold605 |
190409 |
190506 |
- |
TWIF |
DNA/hAT-Ac |
| scaffold605 |
190708 |
190737 |
+ |
(A)n |
Simple_repeat |
| scaffold605 |
190798 |
190852 |
+ |
(TA)n |
Simple_repeat |
| scaffold605 |
190998 |
191028 |
+ |
(AGGCCC)n |
Simple_repeat |
| scaffold605 |
191105 |
191150 |
+ |
RS18371 |
Unspecified |
| scaffold605 |
194673 |
194731 |
+ |
(TAATAA)n |
Simple_repeat |
| scaffold605 |
194890 |
194917 |
+ |
(ACCA)n |
Simple_repeat |
| scaffold605 |
195351 |
195467 |
+ |
(TGG)n |
Simple_repeat |
| scaffold605 |
195428 |
195476 |
+ |
(ATG)n |
Simple_repeat |
| scaffold605 |
195503 |
195520 |
+ |
(T)n |
Simple_repeat |
| scaffold605 |
196339 |
196482 |
- |
RS6044 |
Unspecified |
| scaffold605 |
196524 |
197053 |
- |
RS14713 |
Unspecified |
| scaffold605 |
197222 |
197301 |
+ |
A-rich |
Low_complexity |
| scaffold605 |
198045 |
198067 |
+ |
(T)n |
Simple_repeat |
| scaffold605 |
198489 |
198623 |
+ |
RS5561 |
Unspecified |
| scaffold605 |
200312 |
200369 |
- |
MEGY-I_MT |
LTR/Gypsy |
| scaffold605 |
208280 |
208405 |
+ |
PL564 |
Unspecified |
| scaffold605 |
209420 |
209444 |
+ |
(T)n |
Simple_repeat |
| scaffold605 |
209962 |
209979 |
+ |
(A)n |
Simple_repeat |
| scaffold605 |
210171 |
210194 |
+ |
(TTA)n |
Simple_repeat |
| scaffold605 |
210355 |
210425 |
- |
RS681 |
Unspecified |
| scaffold605 |
212074 |
212137 |
- |
RS18111 |
Unspecified |
| scaffold605 |
212241 |
212421 |
+ |
RS178 |
Unspecified |
| scaffold605 |
212438 |
212467 |
+ |
A-rich |
Low_complexity |
| scaffold605 |
212830 |
212864 |
+ |
GA-rich |
Low_complexity |
| scaffold605 |
214080 |
214106 |
+ |
(AAT)n |
Simple_repeat |
| scaffold605 |
214170 |
214209 |
+ |
A-rich |
Low_complexity |
| scaffold605 |
214437 |
214619 |
- |
RS178 |
Unspecified |
| scaffold605 |
214653 |
214693 |
+ |
(TTTCAAT)n |
Simple_repeat |
| scaffold605 |
215320 |
215376 |
+ |
A-rich |
Low_complexity |
| scaffold605 |
218782 |
218798 |
+ |
(T)n |
Simple_repeat |
| scaffold605 |
220368 |
220401 |
+ |
(ATTGTG)n |
Simple_repeat |
| scaffold605 |
220368 |
220512 |
+ |
(ATTGTG)n |
Simple_repeat |
| scaffold605 |
220385 |
220512 |
+ |
PL171 |
Unspecified |
| scaffold605 |
220542 |
220591 |
+ |
A-rich |
Low_complexity |
| scaffold605 |
221224 |
221293 |
+ |
PL882 |
Unspecified |
| scaffold605 |
221369 |
221398 |
+ |
(ACCCGA)n |
Simple_repeat |
| scaffold605 |
221805 |
221829 |
+ |
(T)n |
Simple_repeat |
| scaffold605 |
223172 |
223319 |
+ |
PL469 |
Unspecified |
| scaffold605 |
223310 |
223830 |
- |
PL480 |
Unspecified |
| scaffold605 |
223851 |
224371 |
+ |
PL469 |
Unspecified |
| scaffold605 |
225176 |
225226 |
+ |
A-rich |
Low_complexity |
| scaffold605 |
225336 |
225361 |
+ |
(AATC)n |
Simple_repeat |
| scaffold605 |
225844 |
225863 |
+ |
(T)n |
Simple_repeat |
| scaffold605 |
230628 |
230665 |
+ |
(T)n |
Simple_repeat |
| scaffold605 |
232071 |
232117 |
+ |
(TCTTT)n |
Simple_repeat |
| scaffold605 |
234727 |
235640 |
- |
PL232 |
Unspecified |
| scaffold605 |
235843 |
235894 |
+ |
A-rich |
Low_complexity |
| scaffold605 |
238417 |
238535 |
- |
RS12750 |
Unspecified |
| scaffold605 |
238648 |
238719 |
+ |
RS15534 |
Unspecified |
| scaffold605 |
238705 |
239066 |
- |
PL774 |
Unspecified |
| scaffold605 |
241837 |
242106 |
- |
PL683 |
Unspecified |
| scaffold605 |
241978 |
242397 |
+ |
PL358 |
Unspecified |
| scaffold605 |
243335 |
243408 |
+ |
RS3305 |
Unspecified |
| scaffold605 |
243489 |
243550 |
+ |
(CAGTT)n |
Simple_repeat |
| scaffold605 |
243568 |
243661 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold605 |
246894 |
247010 |
+ |
Gypsy-112_GM-I |
LTR/Gypsy |
| scaffold605 |
248455 |
248538 |
+ |
(CAGTT)n |
Simple_repeat |
| scaffold605 |
249426 |
249635 |
+ |
RS4 |
Unspecified |
| scaffold605 |
249433 |
249662 |
+ |
RS15470 |
Unspecified |
| scaffold605 |
249879 |
249895 |
+ |
(T)n |
Simple_repeat |
| scaffold605 |
249978 |
250038 |
- |
PIGY-I_PS |
LTR/Gypsy |
| scaffold605 |
250397 |
250423 |
+ |
(ATAAA)n |
Simple_repeat |
| scaffold605 |
250510 |
250588 |
+ |
A-rich |
Low_complexity |
| scaffold605 |
250730 |
251131 |
- |
RS29 |
Unspecified |
| scaffold605 |
252620 |
252724 |
- |
HAT-N12_Mad |
DNA/hAT-Ac |
| scaffold605 |
253255 |
253276 |
+ |
(ATAA)n |
Simple_repeat |
| scaffold605 |
253329 |
253352 |
+ |
(T)n |
Simple_repeat |
| scaffold605 |
253532 |
253565 |
+ |
(TAAT)n |
Simple_repeat |
| scaffold605 |
254879 |
254907 |
+ |
(T)n |
Simple_repeat |
| scaffold605 |
257800 |
257851 |
+ |
(CTCTCTC)n |
Simple_repeat |
| scaffold605 |
259336 |
259404 |
+ |
(GAACT)n |
Simple_repeat |
| scaffold605 |
260006 |
260108 |
+ |
(CAT)n |
Simple_repeat |
| scaffold605 |
260528 |
260550 |
+ |
(T)n |
Simple_repeat |
| scaffold605 |
260551 |
260568 |
+ |
G-rich |
Low_complexity |
| scaffold605 |
260608 |
260715 |
+ |
(CAGCT)n |
Simple_repeat |
| scaffold605 |
260929 |
260952 |
+ |
(A)n |
Simple_repeat |
| scaffold605 |
261043 |
261084 |
+ |
(T)n |
Simple_repeat |
| scaffold605 |
261088 |
261139 |
+ |
(ATATATC)n |
Simple_repeat |
| scaffold605 |
262344 |
262366 |
+ |
(A)n |
Simple_repeat |
| scaffold605 |
263733 |
263918 |
- |
RS391 |
Unspecified |
| scaffold605 |
263744 |
263980 |
- |
RS1073 |
Unspecified |
| scaffold605 |
264941 |
265059 |
+ |
(CCACCG)n |
Simple_repeat |
| scaffold605 |
265589 |
265642 |
+ |
(TGTTTT)n |
Simple_repeat |
| scaffold605 |
266641 |
266671 |
+ |
(TTA)n |
Simple_repeat |
| scaffold605 |
268501 |
268704 |
- |
RS18 |
Unspecified |
| scaffold605 |
272554 |
272577 |
+ |
(A)n |
Simple_repeat |
| scaffold605 |
275711 |
275763 |
+ |
Copia-3_PTri-I |
LTR/Copia |
| scaffold605 |
276213 |
276653 |
- |
RS3501 |
Unspecified |
| scaffold605 |
276261 |
276822 |
+ |
RS6763 |
Unspecified |
| scaffold605 |
276858 |
277128 |
- |
RS574 |
Unspecified |
| scaffold605 |
277501 |
277674 |
- |
RS233 |
Unspecified |
| scaffold605 |
277520 |
277681 |
+ |
RS2719 |
Unspecified |
| scaffold605 |
277699 |
278074 |
+ |
PL69 |
Unspecified |
| scaffold605 |
278096 |
278126 |
+ |
(A)n |
Simple_repeat |
| scaffold605 |
284348 |
284387 |
+ |
(T)n |
Simple_repeat |
| scaffold605 |
285628 |
285664 |
+ |
(GAT)n |
Simple_repeat |
| scaffold605 |
285840 |
285901 |
+ |
(T)n |
Simple_repeat |
| scaffold605 |
285902 |
285908 |
+ |
(TCTTTT)n |
Simple_repeat |
| scaffold605 |
286710 |
286735 |
+ |
(CAC)n |
Simple_repeat |
| scaffold605 |
286846 |
286874 |
+ |
(CAA)n |
Simple_repeat |
| scaffold605 |
289311 |
289331 |
+ |
(A)n |
Simple_repeat |
| scaffold605 |
289964 |
289987 |
+ |
(ACC)n |
Simple_repeat |
| scaffold605 |
290111 |
290135 |
+ |
(CAA)n |
Simple_repeat |
| scaffold605 |
292620 |
292727 |
- |
PL754 |
Unspecified |
| scaffold605 |
293467 |
293603 |
- |
RS3665 |
Unspecified |
| scaffold605 |
293662 |
293719 |
+ |
A-rich |
Low_complexity |
| scaffold605 |
294048 |
294111 |
+ |
(GCC)n |
Simple_repeat |
| scaffold605 |
299395 |
299431 |
+ |
A-rich |
Low_complexity |
| scaffold605 |
300903 |
301441 |
- |
PL637 |
Unspecified |
| scaffold605 |
301452 |
301485 |
+ |
(CT)n |
Simple_repeat |
| scaffold605 |
303446 |
303509 |
+ |
RS10051 |
Unspecified |
| scaffold605 |
303569 |
303628 |
+ |
RS10051 |
Unspecified |
| scaffold605 |
303634 |
303669 |
+ |
(T)n |
Simple_repeat |
| scaffold605 |
303757 |
303813 |
+ |
A-rich |
Low_complexity |
| scaffold605 |
303842 |
304004 |
+ |
RS5374 |
Unspecified |
| scaffold605 |
304161 |
304261 |
+ |
RS16382 |
Unspecified |
| scaffold605 |
304173 |
304275 |
- |
RS93 |
Unspecified |
| scaffold605 |
305546 |
305568 |
+ |
(AAAG)n |
Simple_repeat |
| scaffold605 |
306018 |
306100 |
+ |
A-rich |
Low_complexity |
| scaffold605 |
306078 |
306103 |
+ |
(A)n |
Simple_repeat |
| scaffold605 |
307255 |
307330 |
+ |
RS5782 |
Unspecified |
| scaffold605 |
307986 |
308023 |
+ |
GA-rich |
Low_complexity |
| scaffold605 |
308221 |
308296 |
- |
RS18111 |
Unspecified |
| scaffold605 |
308289 |
308336 |
+ |
RS727 |
Unspecified |
| scaffold605 |
308428 |
308477 |
+ |
(ATA)n |
Simple_repeat |
| scaffold605 |
308831 |
309142 |
- |
RS42 |
Unspecified |
| scaffold605 |
309824 |
309888 |
+ |
RS42 |
Unspecified |
| scaffold605 |
310079 |
310197 |
+ |
RS15162 |
Unspecified |
| scaffold605 |
310080 |
310183 |
- |
RS4475 |
Unspecified |
| scaffold605 |
310787 |
310811 |
+ |
(ATAA)n |
Simple_repeat |
| scaffold605 |
310985 |
311089 |
- |
LTR-7_Mad-LTR |
LTR |
| scaffold605 |
311712 |
311790 |
+ |
(AATTC)n |
Simple_repeat |
| scaffold605 |
312056 |
312155 |
+ |
RS7727 |
Unspecified |
| scaffold605 |
312122 |
312373 |
- |
RS7727 |
Unspecified |
| scaffold605 |
312539 |
312563 |
+ |
(ATC)n |
Simple_repeat |
| scaffold605 |
312643 |
312664 |
+ |
(GAA)n |
Simple_repeat |
| scaffold605 |
312837 |
312919 |
+ |
PL754 |
Unspecified |
| scaffold605 |
314122 |
314141 |
+ |
(T)n |
Simple_repeat |
| scaffold605 |
319056 |
319111 |
+ |
A-rich |
Low_complexity |
| scaffold605 |
319958 |
319999 |
+ |
(AATTG)n |
Simple_repeat |
| scaffold605 |
320774 |
321100 |
- |
RS1277 |
Unspecified |
| scaffold605 |
321623 |
321661 |
+ |
(AAACAAC)n |
Simple_repeat |
| scaffold605 |
321812 |
321998 |
+ |
RS17573 |
Unspecified |
| scaffold605 |
322056 |
322109 |
+ |
(ATATAGA)n |
Simple_repeat |
| scaffold605 |
322984 |
323262 |
+ |
PL293 |
Unspecified |
| scaffold605 |
324031 |
324219 |
+ |
RS7727 |
Unspecified |
| scaffold605 |
324560 |
324620 |
+ |
(TAGTCAT)n |
Simple_repeat |
| scaffold605 |
324782 |
324864 |
+ |
(AATAATTG)n |
Simple_repeat |
| scaffold605 |
325102 |
325209 |
+ |
RS750 |
Unspecified |
| scaffold605 |
326281 |
326318 |
+ |
(ATATAAT)n |
Simple_repeat |
| scaffold605 |
327066 |
327089 |
+ |
(TAAA)n |
Simple_repeat |
| scaffold605 |
327256 |
327316 |
+ |
(TTAATAT)n |
Simple_repeat |
| scaffold605 |
329056 |
329114 |
+ |
A-rich |
Low_complexity |
| scaffold605 |
329200 |
329338 |
- |
RS4505 |
Unspecified |
| scaffold605 |
329429 |
329461 |
+ |
A-rich |
Low_complexity |
| scaffold605 |
329694 |
329714 |
+ |
(A)n |
Simple_repeat |
| scaffold605 |
329872 |
329904 |
+ |
(TGAAC)n |
Simple_repeat |
| scaffold605 |
329955 |
329992 |
+ |
(TGAAC)n |
Simple_repeat |
| scaffold605 |
331644 |
331690 |
+ |
(ATCC)n |
Simple_repeat |
| scaffold605 |
331759 |
331808 |
+ |
A-rich |
Low_complexity |
| scaffold605 |
331955 |
331980 |
+ |
(T)n |
Simple_repeat |
| scaffold605 |
332176 |
332221 |
+ |
(ATCCATC)n |
Simple_repeat |
| scaffold605 |
335255 |
335295 |
+ |
(T)n |
Simple_repeat |
| scaffold605 |
338175 |
338229 |
- |
RS223 |
Unspecified |
| scaffold605 |
338407 |
338432 |
+ |
(TG)n |
Simple_repeat |
| scaffold605 |
338436 |
338469 |
+ |
(TCTCT)n |
Simple_repeat |
| scaffold605 |
338663 |
338704 |
+ |
(GTTTT)n |
Simple_repeat |
| scaffold605 |
339328 |
339428 |
+ |
PL125 |
Unspecified |
| scaffold605 |
339471 |
339499 |
+ |
A-rich |
Low_complexity |
| scaffold605 |
340351 |
340522 |
+ |
RS43 |
Unspecified |
| scaffold605 |
341838 |
341904 |
+ |
Copia-3_PTri-I |
LTR/Copia |
| scaffold605 |
341905 |
342095 |
+ |
Copia-3_PTri-I |
LTR/Copia |
| scaffold605 |
348950 |
348995 |
+ |
A-rich |
Low_complexity |
| scaffold605 |
349758 |
349785 |
+ |
(A)n |
Simple_repeat |
| scaffold605 |
349961 |
349987 |
+ |
(ATT)n |
Simple_repeat |
| scaffold605 |
350104 |
350128 |
+ |
(CTC)n |
Simple_repeat |
| scaffold605 |
350282 |
350323 |
+ |
(TTGATT)n |
Simple_repeat |
| scaffold605 |
350472 |
350492 |
+ |
(A)n |
Simple_repeat |
| scaffold605 |
350565 |
350669 |
- |
RS14955 |
Unspecified |
| scaffold605 |
350818 |
350841 |
+ |
(A)n |
Simple_repeat |
| scaffold605 |
350955 |
351130 |
- |
RS4 |
Unspecified |
| scaffold605 |
351354 |
351427 |
+ |
(A)n |
Simple_repeat |
| scaffold605 |
351474 |
351619 |
- |
RS614 |
Unspecified |
| scaffold605 |
351658 |
351787 |
+ |
RS15113 |
Unspecified |
| scaffold605 |
351686 |
351799 |
- |
RS3146 |
Unspecified |
| scaffold605 |
351786 |
351836 |
- |
RS18363 |
Unspecified |
| scaffold605 |
354723 |
354748 |
+ |
(CCTCC)n |
Simple_repeat |
| scaffold605 |
355005 |
355074 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold605 |
355144 |
355242 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold605 |
355144 |
355208 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold605 |
355194 |
355242 |
- |
RS14977 |
Unspecified |
| scaffold605 |
355944 |
355981 |
+ |
(TAAT)n |
Simple_repeat |
| scaffold605 |
356264 |
356330 |
+ |
(ATTA)n |
Simple_repeat |
| scaffold605 |
356304 |
356340 |
+ |
A-rich |
Low_complexity |
| scaffold605 |
358725 |
358907 |
- |
RS18 |
Unspecified |
| scaffold605 |
359462 |
359887 |
- |
PL3 |
Unspecified |
| scaffold605 |
362522 |
362555 |
+ |
RS2386 |
Unspecified |
| scaffold605 |
362566 |
362624 |
+ |
RS2386 |
Unspecified |
| scaffold605 |
363074 |
363247 |
+ |
RS2403 |
Unspecified |
| scaffold605 |
363394 |
363437 |
+ |
(TTTAAT)n |
Simple_repeat |
| scaffold605 |
363752 |
363803 |
+ |
(AATATTT)n |
Simple_repeat |
| scaffold605 |
364014 |
364308 |
+ |
RS14423 |
Unspecified |
| scaffold605 |
364472 |
364532 |
+ |
(A)n |
Simple_repeat |
| scaffold605 |
364868 |
364912 |
+ |
(ACCCA)n |
Simple_repeat |
| scaffold605 |
369164 |
369203 |
+ |
RS750 |
Unspecified |
| scaffold605 |
369652 |
369941 |
+ |
RS1221 |
Unspecified |
| scaffold605 |
370997 |
371211 |
+ |
RS7280 |
Unspecified |
| scaffold605 |
371299 |
371503 |
+ |
RS7196 |
Unspecified |
| scaffold605 |
374375 |
374487 |
+ |
Copia-2_SL-LTR |
LTR/Copia |
| scaffold605 |
374504 |
374758 |
+ |
Copia-2_SL-LTR |
LTR/Copia |
| scaffold605 |
375081 |
375278 |
+ |
(CTGAA)n |
Simple_repeat |
| scaffold605 |
377399 |
377421 |
+ |
(TATT)n |
Simple_repeat |
| scaffold605 |
377548 |
377603 |
+ |
(TTAATT)n |
Simple_repeat |
| scaffold605 |
377825 |
377841 |
+ |
(A)n |
Simple_repeat |
| scaffold605 |
378778 |
378804 |
+ |
A-rich |
Low_complexity |
| scaffold605 |
378869 |
379346 |
+ |
Copia-50_GM-I |
LTR/Copia |
| scaffold605 |
379890 |
380235 |
+ |
Copia-78_VV-I |
LTR/Copia |
| scaffold605 |
383965 |
384030 |
+ |
(AATTTA)n |
Simple_repeat |
| scaffold605 |
384032 |
384309 |
+ |
RS106 |
Unspecified |
| scaffold605 |
384591 |
384980 |
+ |
RS466 |
Unspecified |
| scaffold605 |
385812 |
385884 |
+ |
(AGCTG)n |
Simple_repeat |
| scaffold605 |
385901 |
386027 |
+ |
RS466 |
Unspecified |
| scaffold605 |
386019 |
386140 |
+ |
RS466 |
Unspecified |
| scaffold605 |
386139 |
386259 |
+ |
(AACTG)n |
Simple_repeat |
| scaffold605 |
386263 |
386368 |
+ |
(TTG)n |
Simple_repeat |
| scaffold605 |
386368 |
386490 |
+ |
(AACTG)n |
Simple_repeat |
| scaffold605 |
386750 |
386773 |
+ |
(A)n |
Simple_repeat |
| scaffold605 |
386780 |
386897 |
+ |
RS1162 |
Unspecified |
| scaffold605 |
386879 |
386945 |
- |
RS257 |
Unspecified |
| scaffold605 |
390356 |
390438 |
+ |
RS421 |
Unspecified |
| scaffold605 |
390647 |
390687 |
- |
RS333 |
Unspecified |
| scaffold605 |
390789 |
390810 |
+ |
(A)n |
Simple_repeat |
| scaffold605 |
390973 |
391037 |
+ |
(ATT)n |
Simple_repeat |
| scaffold605 |
391131 |
391214 |
+ |
(T)n |
Simple_repeat |
| scaffold605 |
391469 |
391517 |
+ |
(TTCTT)n |
Simple_repeat |
| scaffold605 |
394075 |
394165 |
+ |
(TGG)n |
Simple_repeat |
| scaffold605 |
394269 |
394314 |
+ |
(TTG)n |
Simple_repeat |
| scaffold605 |
394652 |
394712 |
- |
PIGY-I_PS |
LTR/Gypsy |
| scaffold605 |
395007 |
395041 |
+ |
(T)n |
Simple_repeat |
| scaffold605 |
395113 |
395181 |
+ |
(TTTGAT)n |
Simple_repeat |
| scaffold605 |
395951 |
396429 |
- |
PL271 |
Unspecified |
| scaffold605 |
397788 |
398255 |
+ |
RS35 |
Unspecified |
| scaffold605 |
398597 |
398770 |
- |
RS233 |
Unspecified |
| scaffold605 |
400309 |
400325 |
+ |
(T)n |
Simple_repeat |
| scaffold605 |
402373 |
402526 |
- |
RS573 |
Unspecified |
| scaffold605 |
403517 |
403554 |
+ |
(TCCACT)n |
Simple_repeat |
| scaffold605 |
404425 |
404441 |
+ |
(A)n |
Simple_repeat |
| scaffold605 |
404598 |
404627 |
+ |
(T)n |
Simple_repeat |
| scaffold605 |
404775 |
404803 |
+ |
(CCA)n |
Simple_repeat |
| scaffold605 |
405086 |
405129 |
+ |
(GATGAC)n |
Simple_repeat |
| scaffold605 |
406045 |
406272 |
+ |
(AACTG)n |
Simple_repeat |
| scaffold605 |
406184 |
406298 |
+ |
(AGCTG)n |
Simple_repeat |
| scaffold605 |
406448 |
406695 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold605 |
407309 |
407356 |
+ |
(ATA)n |
Simple_repeat |
| scaffold605 |
408190 |
408464 |
- |
PL753 |
Unspecified |
| scaffold605 |
408937 |
409048 |
- |
RS10 |
Unspecified |
| scaffold605 |
409549 |
409936 |
+ |
PL436 |
Unspecified |
| scaffold605 |
410010 |
410033 |
+ |
(T)n |
Simple_repeat |
| scaffold605 |
410034 |
410056 |
+ |
(CTTTTCT)n |
Simple_repeat |
| scaffold605 |
410313 |
410571 |
+ |
RS8290 |
Unspecified |
| scaffold605 |
413826 |
413865 |
- |
Gypsy-120_SB-I |
LTR/Gypsy |
| scaffold605 |
414469 |
414600 |
- |
DIASPORA_I-int |
LTR/Gypsy |
| scaffold605 |
414648 |
414706 |
- |
DIASPORA_I-int |
LTR/Gypsy |
| scaffold605 |
414821 |
414914 |
+ |
RS11255 |
Unspecified |
| scaffold605 |
415136 |
415277 |
- |
RS3382 |
Unspecified |
| scaffold605 |
415272 |
415348 |
+ |
RS10948 |
Unspecified |
| scaffold605 |
416110 |
416161 |
+ |
(GTG)n |
Simple_repeat |
| scaffold605 |
416189 |
416215 |
+ |
(TCTTC)n |
Simple_repeat |
| scaffold605 |
416343 |
416381 |
+ |
(T)n |
Simple_repeat |
| scaffold605 |
416471 |
416625 |
- |
RS7270 |
Unspecified |
| scaffold605 |
417022 |
417112 |
- |
Athila8A_I-int |
LTR/Gypsy |
| scaffold605 |
417066 |
417122 |
- |
Alfare1_I-int |
LTR/Copia? |
| scaffold605 |
418231 |
418277 |
+ |
A-rich |
Low_complexity |
| scaffold605 |
418319 |
418346 |
- |
Gypsy-16_Mad-I |
LTR/Gypsy |
| scaffold605 |
418319 |
418601 |
- |
Gypsy-16_Mad-I |
LTR/Gypsy |
| scaffold605 |
418342 |
418601 |
+ |
RS8290 |
Unspecified |
| scaffold605 |
418789 |
419102 |
- |
Gypsy18-PTR_LTR |
LTR/Gypsy |
| scaffold605 |
419108 |
419138 |
+ |
(AAT)n |
Simple_repeat |
| scaffold605 |
419286 |
419369 |
+ |
A-rich |
Low_complexity |
| scaffold605 |
419585 |
419786 |
+ |
RS3053 |
Unspecified |
| scaffold605 |
420552 |
420648 |
+ |
(TCGTT)n |
Simple_repeat |
| scaffold605 |
421439 |
421488 |
+ |
(TTCAGT)n |
Simple_repeat |
| scaffold605 |
421567 |
421686 |
- |
RS549 |
Unspecified |
| scaffold605 |
422193 |
422244 |
+ |
(TTTTATG)n |
Simple_repeat |
| scaffold605 |
422444 |
422460 |
+ |
(A)n |
Simple_repeat |
| scaffold605 |
423759 |
424014 |
- |
RS1 |
Unspecified |
| scaffold605 |
424854 |
424911 |
- |
RS79 |
Unspecified |
| scaffold605 |
424914 |
425068 |
- |
RS79 |
Unspecified |
| scaffold605 |
425015 |
425075 |
+ |
RS18012 |
Unspecified |
| scaffold605 |
425564 |
425613 |
+ |
(TTTAT)n |
Simple_repeat |
| scaffold605 |
425674 |
425713 |
+ |
(CATACTC)n |
Simple_repeat |
| scaffold605 |
425860 |
425927 |
- |
RS10827 |
Unspecified |
| scaffold605 |
425944 |
425983 |
+ |
A-rich |
Low_complexity |
| scaffold605 |
426032 |
426144 |
+ |
RS18111 |
Unspecified |
| scaffold605 |
426065 |
426217 |
- |
RS727 |
Unspecified |
| scaffold605 |
426317 |
426381 |
+ |
(GAT)n |
Simple_repeat |
| scaffold605 |
426555 |
426617 |
- |
RS663 |
Unspecified |
| scaffold605 |
427144 |
427176 |
+ |
(AACCA)n |
Simple_repeat |
| scaffold605 |
428574 |
428624 |
- |
RS10 |
Unspecified |
| scaffold605 |
428581 |
428703 |
+ |
RS598 |
Unspecified |
| scaffold605 |
429505 |
429662 |
+ |
RS10029 |
Unspecified |
| scaffold605 |
429760 |
429793 |
+ |
(T)n |
Simple_repeat |
| scaffold605 |
433113 |
433136 |
+ |
(AC)n |
Simple_repeat |
| scaffold605 |
434335 |
434367 |
+ |
(T)n |
Simple_repeat |
| scaffold605 |
434622 |
434676 |
+ |
(TTTT)n |
Simple_repeat |
| scaffold605 |
434844 |
434881 |
+ |
A-rich |
Low_complexity |
| scaffold605 |
434957 |
435066 |
- |
RS16382 |
Unspecified |
| scaffold605 |
435076 |
435359 |
- |
RS582 |
Unspecified |
| scaffold605 |
435349 |
435501 |
- |
RS582 |
Unspecified |
| scaffold605 |
435467 |
435514 |
- |
RS927 |
Unspecified |
| scaffold605 |
435591 |
435627 |
+ |
(ATATTTT)n |
Simple_repeat |
| scaffold605 |
435797 |
436031 |
+ |
RS13794 |
Unspecified |
| scaffold605 |
436122 |
436173 |
+ |
(A)n |
Simple_repeat |
| scaffold605 |
436431 |
436507 |
+ |
RS13929 |
Unspecified |
| scaffold605 |
436659 |
436758 |
- |
LT1_EPa |
LTR? |
| scaffold605 |
437298 |
437357 |
+ |
PL721 |
Unspecified |
| scaffold605 |
437359 |
437486 |
- |
RS201 |
Unspecified |
| scaffold605 |
437494 |
437553 |
+ |
(AATTA)n |
Simple_repeat |
| scaffold605 |
438060 |
438096 |
+ |
(AAATA)n |
Simple_repeat |
| scaffold605 |
438171 |
438213 |
+ |
(ATAG)n |
Simple_repeat |
| scaffold605 |
438308 |
438440 |
+ |
TRAMET1 |
DNA/TcMar-Stowaway |
| scaffold605 |
438480 |
438524 |
+ |
(TAA)n |
Simple_repeat |
| scaffold605 |
438971 |
439015 |
+ |
(TTTTTT)n |
Simple_repeat |
| scaffold605 |
440713 |
440815 |
- |
PL183 |
Unspecified |
| scaffold605 |
441372 |
441395 |
+ |
(ATTC)n |
Simple_repeat |
| scaffold605 |
441901 |
441948 |
+ |
A-rich |
Low_complexity |
| scaffold605 |
442287 |
442387 |
- |
RS16382 |
Unspecified |
| scaffold605 |
442297 |
442400 |
- |
PL436 |
Unspecified |
| scaffold605 |
442385 |
442433 |
+ |
PL81 |
Unspecified |
| scaffold605 |
442699 |
442726 |
+ |
(A)n |
Simple_repeat |
| scaffold605 |
442902 |
443011 |
- |
RS285 |
Unspecified |
| scaffold605 |
443107 |
443142 |
+ |
(T)n |
Simple_repeat |
| scaffold605 |
443344 |
443415 |
- |
RS972 |
Unspecified |
| scaffold605 |
443918 |
444269 |
- |
PL255 |
Unspecified |
| scaffold605 |
444303 |
444482 |
+ |
PL368 |
Unspecified |
| scaffold605 |
445046 |
445065 |
+ |
(ATGTGT)n |
Simple_repeat |
| scaffold605 |
445066 |
445117 |
+ |
(GTAT)n |
Simple_repeat |
| scaffold605 |
445118 |
445136 |
+ |
(ATGTGT)n |
Simple_repeat |
| scaffold605 |
445164 |
445296 |
+ |
(TTG)n |
Simple_repeat |
| scaffold605 |
445562 |
445745 |
- |
EnSpm-1_GM |
DNA/CMC-EnSpm |
| scaffold605 |
446108 |
446130 |
+ |
(A)n |
Simple_repeat |
| scaffold605 |
446850 |
446886 |
+ |
(A)n |
Simple_repeat |
| scaffold605 |
449064 |
449276 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold605 |
452658 |
452680 |
+ |
(T)n |
Simple_repeat |
| scaffold605 |
452727 |
452760 |
+ |
(T)n |
Simple_repeat |
| scaffold605 |
453383 |
453427 |
+ |
A-rich |
Low_complexity |
| scaffold605 |
453509 |
453536 |
+ |
(A)n |
Simple_repeat |
| scaffold605 |
454210 |
454286 |
- |
RS915 |
Unspecified |
| scaffold605 |
454305 |
454394 |
+ |
LTR-7_Mad-LTR |
LTR |
| scaffold605 |
456089 |
456139 |
+ |
RS17600 |
Unspecified |
| scaffold605 |
456095 |
456367 |
+ |
RS1 |
Unspecified |
| scaffold605 |
456765 |
456796 |
+ |
(TTACA)n |
Simple_repeat |
| scaffold605 |
459395 |
459415 |
+ |
(T)n |
Simple_repeat |
| scaffold605 |
459522 |
459549 |
+ |
(ATA)n |
Simple_repeat |
| scaffold605 |
459856 |
460071 |
+ |
RS1349 |
Unspecified |
| scaffold605 |
460197 |
460205 |
+ |
(ATTTTTG)n |
Simple_repeat |
| scaffold605 |
460206 |
460241 |
+ |
(T)n |
Simple_repeat |
| scaffold605 |
460789 |
460929 |
+ |
RS3250 |
Unspecified |
| scaffold605 |
461297 |
461426 |
- |
RS6236 |
Unspecified |
| scaffold605 |
461462 |
461572 |
+ |
A-rich |
Low_complexity |
| scaffold605 |
461498 |
461571 |
+ |
GA-rich |
Low_complexity |
| scaffold605 |
461588 |
461670 |
- |
RS8823 |
Unspecified |
| scaffold605 |
461756 |
461890 |
+ |
L1-1_STu |
LINE/L1 |
| scaffold605 |
461964 |
462017 |
+ |
(AACCCGT)n |
Simple_repeat |
| scaffold605 |
462246 |
462289 |
+ |
(TAATACCG)n |
Simple_repeat |
| scaffold605 |
462557 |
462735 |
- |
RS3512 |
Unspecified |
| scaffold605 |
462566 |
462635 |
- |
RS6236 |
Unspecified |
| scaffold605 |
462606 |
462675 |
- |
RS6236 |
Unspecified |
| scaffold605 |
462620 |
462721 |
- |
RS3512 |
Unspecified |
| scaffold605 |
462620 |
462742 |
- |
RS3512 |
Unspecified |
| scaffold605 |
462740 |
462773 |
+ |
(AACATT)n |
Simple_repeat |
| scaffold605 |
463373 |
463636 |
+ |
A-rich |
Low_complexity |
| scaffold605 |
463373 |
463494 |
+ |
A-rich |
Low_complexity |
| scaffold605 |
463472 |
463636 |
+ |
RS2082 |
Unspecified |
| scaffold605 |
463957 |
463980 |
+ |
(T)n |
Simple_repeat |
| scaffold605 |
464939 |
464956 |
+ |
(T)n |
Simple_repeat |
| scaffold605 |
464974 |
465002 |
+ |
(TA)n |
Simple_repeat |
| scaffold605 |
465434 |
465535 |
- |
RS2753 |
Unspecified |
| scaffold605 |
466057 |
466192 |
+ |
PL688 |
Unspecified |
| scaffold605 |
466200 |
466649 |
+ |
PL400 |
Unspecified |
| scaffold605 |
466244 |
466644 |
- |
RS1010 |
Unspecified |
| scaffold605 |
466938 |
467154 |
+ |
(AAT)n |
Simple_repeat |
| scaffold605 |
467568 |
467590 |
+ |
(A)n |
Simple_repeat |
| scaffold605 |
467639 |
467662 |
+ |
(A)n |
Simple_repeat |
| scaffold605 |
467785 |
467963 |
- |
RS8450 |
Unspecified |
| scaffold605 |
467964 |
468050 |
+ |
(CCTTT)n |
Simple_repeat |
| scaffold605 |
469546 |
469696 |
+ |
RS17662 |
Unspecified |
| scaffold605 |
470145 |
470221 |
+ |
(AATGAA)n |
Simple_repeat |
| scaffold605 |
470222 |
470245 |
+ |
(GAT)n |
Simple_repeat |
| scaffold605 |
470246 |
470271 |
+ |
(AATGAA)n |
Simple_repeat |
| scaffold605 |
470272 |
470304 |
+ |
(ATG)n |
Simple_repeat |
| scaffold605 |
470431 |
470549 |
+ |
RS8450 |
Unspecified |
| scaffold605 |
471015 |
471038 |
+ |
(A)n |
Simple_repeat |
| scaffold605 |
475191 |
475248 |
+ |
TST1_I-int |
LTR/Copia |
| scaffold605 |
475553 |
475586 |
+ |
(A)n |
Simple_repeat |
| scaffold605 |
477093 |
477181 |
+ |
GA-rich |
Low_complexity |
| scaffold605 |
477414 |
477724 |
+ |
(TCGGG)n |
Simple_repeat |
| scaffold605 |
477774 |
477783 |
+ |
(TTAA)n |
Simple_repeat |
| scaffold605 |
477784 |
477802 |
+ |
(TAA)n |
Simple_repeat |
| scaffold605 |
477803 |
477831 |
+ |
(TTAA)n |
Simple_repeat |
| scaffold605 |
477948 |
478516 |
+ |
PL8 |
Unspecified |
| scaffold605 |
479027 |
479080 |
+ |
(TTGTGTT)n |
Simple_repeat |
| scaffold605 |
482090 |
482252 |
+ |
RS7585 |
Unspecified |
| scaffold605 |
482407 |
482456 |
+ |
(ATT)n |
Simple_repeat |
| scaffold605 |
482661 |
482816 |
+ |
RS14736 |
Unspecified |
| scaffold605 |
483027 |
483076 |
+ |
(CCA)n |
Simple_repeat |
| scaffold605 |
483501 |
483523 |
+ |
(A)n |
Simple_repeat |
| scaffold605 |
486523 |
486539 |
+ |
(A)n |
Simple_repeat |
| scaffold605 |
486556 |
486629 |
+ |
(TAA)n |
Simple_repeat |
| scaffold605 |
487219 |
487245 |
+ |
(A)n |
Simple_repeat |
| scaffold605 |
487542 |
487600 |
+ |
GA-rich |
Low_complexity |
| scaffold605 |
487694 |
487723 |
+ |
(T)n |
Simple_repeat |
| scaffold605 |
493589 |
494261 |
+ |
RS1767 |
Unspecified |
| scaffold605 |
494690 |
494724 |
+ |
A-rich |
Low_complexity |
| scaffold605 |
495548 |
495822 |
- |
RS1 |
Unspecified |
| scaffold605 |
496282 |
496444 |
+ |
RS513 |
Unspecified |
| scaffold605 |
496553 |
496606 |
- |
PIGY-I_PS |
LTR/Gypsy |
| scaffold605 |
496718 |
496960 |
- |
RS4 |
Unspecified |
| scaffold605 |
497103 |
497193 |
- |
LTR-7_Mad-LTR |
LTR |
| scaffold605 |
497344 |
497376 |
- |
LT1_EPa |
LTR? |
| scaffold605 |
497421 |
497511 |
- |
LTR-7_Mad-LTR |
LTR |
| scaffold605 |
497761 |
497982 |
+ |
Copia-3_PTri-I |
LTR/Copia |
| scaffold605 |
500358 |
500376 |
+ |
(T)n |
Simple_repeat |
| scaffold605 |
502479 |
502536 |
+ |
(TTGATA)n |
Simple_repeat |
| scaffold605 |
503321 |
503493 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold605 |
504013 |
504042 |
+ |
(ACCCGA)n |
Simple_repeat |
| scaffold605 |
510971 |
511132 |
- |
PL676 |
Unspecified |
| scaffold605 |
511136 |
511237 |
+ |
(AAT)n |
Simple_repeat |
| scaffold605 |
511333 |
511381 |
+ |
(TAA)n |
Simple_repeat |
| scaffold605 |
511640 |
511848 |
+ |
RS18 |
Unspecified |
| scaffold605 |
511955 |
512006 |
+ |
(ATATT)n |
Simple_repeat |
| scaffold605 |
512369 |
512404 |
+ |
(TCGTT)n |
Simple_repeat |
| scaffold605 |
512659 |
512768 |
+ |
RS1377 |
Unspecified |
| scaffold605 |
512768 |
512903 |
+ |
RS778 |
Unspecified |
| scaffold605 |
512824 |
512933 |
- |
RS9599 |
Unspecified |
| scaffold605 |
512968 |
513053 |
+ |
(GCCCG)n |
Simple_repeat |
| scaffold605 |
513066 |
513223 |
+ |
RS1377 |
Unspecified |
| scaffold605 |
513344 |
513503 |
- |
RS4824 |
Unspecified |
| scaffold605 |
514209 |
514353 |
- |
RS8175 |
Unspecified |
| scaffold605 |
514389 |
514475 |
- |
RS415 |
Unspecified |
| scaffold605 |
514449 |
514575 |
+ |
RS415 |
Unspecified |
| scaffold605 |
514567 |
514631 |
+ |
RS415 |
Unspecified |
| scaffold605 |
514654 |
514851 |
+ |
Copia-3_PTri-I |
LTR/Copia |
| scaffold605 |
514852 |
515057 |
+ |
Copia-3_PTri-I |
LTR/Copia |
| scaffold605 |
515447 |
515481 |
+ |
(TATATGA)n |
Simple_repeat |
| scaffold605 |
516430 |
516454 |
+ |
(TAA)n |
Simple_repeat |
| scaffold605 |
516513 |
516591 |
+ |
(ATA)n |
Simple_repeat |
| scaffold605 |
516659 |
516697 |
+ |
(AAT)n |
Simple_repeat |
| scaffold605 |
516920 |
516939 |
+ |
(TA)n |
Simple_repeat |
| scaffold605 |
517633 |
517735 |
+ |
GA-rich |
Low_complexity |
| scaffold605 |
518522 |
518715 |
- |
PL622 |
Unspecified |
| scaffold605 |
518887 |
518919 |
- |
RS79 |
Unspecified |
| scaffold605 |
518891 |
518928 |
- |
RS5 |
Unspecified |
| scaffold605 |
518893 |
518934 |
+ |
RS5 |
Unspecified |
| scaffold605 |
519014 |
519534 |
- |
PL753 |
Unspecified |
| scaffold605 |
519756 |
519840 |
+ |
HADES_TA |
DNA/TcMar-Stowaway |
| scaffold605 |
519860 |
519876 |
+ |
(A)n |
Simple_repeat |
| scaffold605 |
520118 |
520310 |
- |
PL622 |
Unspecified |
| scaffold605 |
520624 |
520693 |
+ |
(TTTCATC)n |
Simple_repeat |
| scaffold605 |
521276 |
521401 |
+ |
RS17291 |
Unspecified |
| scaffold605 |
523159 |
523328 |
- |
RS573 |
Unspecified |
| scaffold605 |
533374 |
533555 |
- |
RS178 |
Unspecified |
| scaffold605 |
533729 |
533748 |
+ |
(T)n |
Simple_repeat |
| scaffold605 |
533844 |
534093 |
+ |
(AACTG)n |
Simple_repeat |
| scaffold605 |
534182 |
534242 |
- |
PL563 |
Unspecified |
| scaffold605 |
534660 |
534686 |
+ |
(GGCC)n |
Simple_repeat |
| scaffold605 |
534912 |
535283 |
+ |
MuDR_A_B |
MuDR_A_B(TransposonPSI) |
| scaffold605 |
536517 |
536774 |
+ |
PL676 |
Unspecified |
| scaffold605 |
536771 |
536930 |
+ |
RS1178 |
Unspecified |
| scaffold605 |
540877 |
541028 |
+ |
RS1857 |
Unspecified |
| scaffold605 |
543514 |
543576 |
+ |
(T)n |
Simple_repeat |
| scaffold605 |
548018 |
548812 |
+ |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold605 |
548864 |
550175 |
+ |
Copia-71_VV-I |
LTR/Copia |
| scaffold605 |
550359 |
552146 |
+ |
Copia-71_VV-I |
LTR/Copia |
| scaffold605 |
553409 |
553557 |
- |
RS2100 |
Unspecified |
| scaffold605 |
553602 |
553663 |
+ |
A-rich |
Low_complexity |
| scaffold605 |
553891 |
553908 |
+ |
(AATATA)n |
Simple_repeat |
| scaffold605 |
553909 |
553943 |
+ |
A-rich |
Low_complexity |
| scaffold605 |
553944 |
554078 |
- |
RS7374 |
Unspecified |
| scaffold605 |
554137 |
554190 |
+ |
(TA)n |
Simple_repeat |
| scaffold605 |
554916 |
554950 |
+ |
(A)n |
Simple_repeat |
| scaffold605 |
554916 |
555244 |
+ |
(A)n |
Simple_repeat |
| scaffold605 |
554939 |
555244 |
+ |
RS9768 |
Unspecified |
| scaffold605 |
555952 |
555998 |
+ |
(TTATT)n |
Simple_repeat |
| scaffold605 |
556112 |
556237 |
+ |
A-rich |
Low_complexity |
| scaffold605 |
556267 |
556360 |
+ |
(ACC)n |
Simple_repeat |
| scaffold605 |
556689 |
556736 |
+ |
Copia-80_PT-I |
LTR/Copia |
| scaffold605 |
557781 |
557841 |
+ |
A-rich |
Low_complexity |
| scaffold605 |
558227 |
558714 |
+ |
RS9215 |
Unspecified |
| scaffold605 |
558947 |
558988 |
+ |
(T)n |
Simple_repeat |
| scaffold605 |
559012 |
559056 |
+ |
(TCG)n |
Simple_repeat |
| scaffold605 |
564644 |
564874 |
+ |
RS18 |
Unspecified |
| scaffold605 |
565372 |
565417 |
+ |
(TTA)n |
Simple_repeat |
| scaffold605 |
567631 |
567698 |
+ |
A-rich |
Low_complexity |
| scaffold605 |
567749 |
567782 |
+ |
(TAA)n |
Simple_repeat |
| scaffold605 |
567973 |
568194 |
- |
RS880 |
Unspecified |
| scaffold605 |
568418 |
568464 |
+ |
(TATT)n |
Simple_repeat |
| scaffold605 |
568799 |
568994 |
- |
RS12339 |
Unspecified |
| scaffold605 |
569040 |
569173 |
+ |
RS1233 |
Unspecified |
| scaffold605 |
570316 |
570366 |
+ |
(CAG)n |
Simple_repeat |
| scaffold605 |
575408 |
575428 |
+ |
(A)n |
Simple_repeat |
| scaffold605 |
581354 |
581415 |
+ |
GA-rich |
Low_complexity |
| scaffold605 |
581656 |
581717 |
+ |
GA-rich |
Low_complexity |
| scaffold605 |
582410 |
582625 |
+ |
Copia-3_PTri-I |
LTR/Copia |
| scaffold605 |
584524 |
584811 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold605 |
584970 |
585372 |
+ |
A-rich |
Low_complexity |
| scaffold605 |
585316 |
585372 |
+ |
A-rich |
Low_complexity |
| scaffold605 |
585431 |
585498 |
+ |
(ATC)n |
Simple_repeat |
| scaffold605 |
585479 |
585530 |
+ |
(TCG)n |
Simple_repeat |
| scaffold605 |
585912 |
585966 |
+ |
(TG)n |
Simple_repeat |
| scaffold605 |
586018 |
586048 |
+ |
(TGTGG)n |
Simple_repeat |
| scaffold605 |
587211 |
587347 |
- |
RS9352 |
Unspecified |
| scaffold605 |
587738 |
588139 |
- |
RS4663 |
Unspecified |
| scaffold605 |
587913 |
588190 |
+ |
RS12632 |
Unspecified |
| scaffold605 |
588213 |
588295 |
- |
RS279 |
Unspecified |
| scaffold605 |
588295 |
588330 |
+ |
RS12632 |
Unspecified |
| scaffold605 |
588353 |
588660 |
- |
RS279 |
Unspecified |
| scaffold605 |
588717 |
588788 |
+ |
PL368 |
Unspecified |
| scaffold605 |
589092 |
589256 |
- |
RS66 |
Unspecified |
| scaffold605 |
589257 |
590604 |
+ |
RS658 |
Unspecified |
| scaffold605 |
592524 |
592544 |
+ |
(CTA)n |
Simple_repeat |
| scaffold605 |
592686 |
592772 |
+ |
(TTTTTT)n |
Simple_repeat |
| scaffold605 |
592991 |
593975 |
+ |
RS1415 |
Unspecified |
| scaffold605 |
593976 |
594258 |
- |
RS1200 |
Unspecified |