scaffold6057 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold6057 |
12 |
40 |
+ |
(GGT)n |
Simple_repeat |
| scaffold6057 |
154 |
251 |
+ |
EnSpm-36_SBi |
DNA/CMC-EnSpm |
| scaffold6057 |
217 |
301 |
- |
ENSPM-6_ZM |
DNA/CMC-EnSpm |
| scaffold6057 |
1824 |
1848 |
+ |
(T)n |
Simple_repeat |
| scaffold6057 |
2529 |
2572 |
+ |
(TTCAA)n |
Simple_repeat |
| scaffold6057 |
2974 |
3638 |
+ |
Copia-48_ST-I |
LTR/Copia |
| scaffold6057 |
3998 |
4395 |
+ |
Copia-48_ST-I |
LTR/Copia |
| scaffold6057 |
4459 |
4718 |
+ |
Copia-48_ST-I |
LTR/Copia |
| scaffold6057 |
5335 |
5397 |
+ |
A-rich |
Low_complexity |
| scaffold6057 |
5979 |
6020 |
- |
WHAM2_TM-int |
LTR/Gypsy |
| scaffold6057 |
6260 |
6294 |
+ |
(TTTC)n |
Simple_repeat |
| scaffold6057 |
6757 |
7128 |
- |
Athila6B_I-int |
LTR/Gypsy |
| scaffold6057 |
6757 |
6901 |
- |
Athila6B_I-int |
LTR/Gypsy |
| scaffold6057 |
6851 |
7128 |
+ |
RS6882 |
Unspecified |
| scaffold6057 |
7144 |
7179 |
+ |
(GGCC)n |
Simple_repeat |
| scaffold6057 |
7914 |
8444 |
- |
PIGY-I_PS |
LTR/Gypsy |
| scaffold6057 |
7914 |
8600 |
- |
PIGY-I_PS |
LTR/Gypsy |
| scaffold6057 |
8400 |
8600 |
- |
RS6781 |
Unspecified |
| scaffold6057 |
8641 |
8892 |
- |
Gypsy-46_STu-I |
LTR/Gypsy |
| scaffold6057 |
8641 |
8698 |
- |
Gypsy-46_STu-I |
LTR/Gypsy |
| scaffold6057 |
8691 |
8892 |
- |
RS6781 |
Unspecified |
| scaffold6057 |
11138 |
11164 |
+ |
A-rich |
Low_complexity |
| scaffold6057 |
11265 |
11301 |
+ |
(GCCG)n |
Simple_repeat |
| scaffold6057 |
12527 |
12602 |
+ |
A-rich |
Low_complexity |
| scaffold6057 |
12682 |
12750 |
+ |
(TTGAG)n |
Simple_repeat |
| scaffold6057 |
13250 |
13299 |
+ |
ATHILA-1_SBi-I |
LTR/Gypsy |
| scaffold6057 |
13715 |
13741 |
+ |
(GGCC)n |
Simple_repeat |
| scaffold6057 |
13850 |
13888 |
+ |
(TATCTTT)n |
Simple_repeat |
| scaffold6057 |
14311 |
14337 |
+ |
(GGCC)n |
Simple_repeat |
| scaffold6057 |
14446 |
14484 |
+ |
(TATCTTT)n |
Simple_repeat |
| scaffold6057 |
15350 |
15409 |
+ |
(TTGTAA)n |
Simple_repeat |
| scaffold6057 |
15411 |
15444 |
+ |
(AGT)n |
Simple_repeat |
| scaffold6057 |
15768 |
15791 |
+ |
(T)n |
Simple_repeat |
| scaffold6057 |
16147 |
16425 |
- |
PL582 |
Unspecified |
| scaffold6057 |
16432 |
16754 |
+ |
RS29 |
Unspecified |
| scaffold6057 |
16914 |
16938 |
+ |
(CTT)n |
Simple_repeat |
| scaffold6057 |
17250 |
17291 |
+ |
(TTAATTT)n |
Simple_repeat |
| scaffold6057 |
18144 |
18215 |
+ |
RS29 |
Unspecified |
| scaffold6057 |
18463 |
18527 |
+ |
(AATTT)n |
Simple_repeat |
| scaffold6057 |
18489 |
19244 |
- |
Gypsy16-VV_I-int |
LTR/Gypsy |
| scaffold6057 |
18766 |
18815 |
+ |
(TTTTTG)n |
Simple_repeat |
| scaffold6057 |
18986 |
19020 |
+ |
(T)n |
Simple_repeat |
| scaffold6057 |
19021 |
19059 |
+ |
(TAT)n |
Simple_repeat |
| scaffold6057 |
21948 |
21982 |
+ |
(AATCC)n |
Simple_repeat |
| scaffold6057 |
24005 |
24090 |
+ |
LINE1-35_SBi |
LINE/L1 |
| scaffold6057 |
24399 |
24490 |
+ |
(TAA)n |
Simple_repeat |
| scaffold6057 |
24491 |
24517 |
+ |
(TAT)n |
Simple_repeat |
| scaffold6057 |
27670 |
27693 |
+ |
(CAA)n |
Simple_repeat |
| scaffold6057 |
27827 |
27854 |
+ |
(TGAAC)n |
Simple_repeat |
| scaffold6057 |
28022 |
28073 |
+ |
(CCA)n |
Simple_repeat |
| scaffold6057 |
28190 |
28213 |
+ |
(T)n |
Simple_repeat |
| scaffold6057 |
28640 |
28782 |
- |
TRAMET1 |
DNA/TcMar-Stowaway |
| scaffold6057 |
28902 |
28956 |
+ |
(AATTA)n |
Simple_repeat |
| scaffold6057 |
29546 |
29718 |
+ |
RS18 |
Unspecified |
| scaffold6057 |
29715 |
29971 |
- |
RS1 |
Unspecified |
| scaffold6057 |
30866 |
31515 |
+ |
RS1475 |
Unspecified |
| scaffold6057 |
31542 |
31583 |
- |
Monkey_MA |
LTR/Gypsy |
| scaffold6057 |
32039 |
32441 |
+ |
RS6059 |
Unspecified |
| scaffold6057 |
32138 |
33026 |
+ |
RS3583 |
Unspecified |
| scaffold6057 |
33187 |
33246 |
- |
Gypsy9-VV_I-int |
LTR/Gypsy |
| scaffold6057 |
33839 |
34297 |
- |
Gypsy9-VV_I-int |
LTR/Gypsy |
| scaffold6057 |
34628 |
35277 |
+ |
RS1475 |
Unspecified |
| scaffold6057 |
35497 |
35583 |
+ |
(TTAC)n |
Simple_repeat |
| scaffold6057 |
36007 |
36759 |
- |
PL556 |
Unspecified |
| scaffold6057 |
36758 |
36947 |
+ |
RS13855 |
Unspecified |
| scaffold6057 |
36876 |
37021 |
+ |
RS13855 |
Unspecified |
| scaffold6057 |
37648 |
37682 |
+ |
(T)n |
Simple_repeat |
| scaffold6057 |
37862 |
37907 |
- |
HAT-N10_Mad |
DNA/hAT-Ac |
| scaffold6057 |
37933 |
38256 |
+ |
PL483 |
Unspecified |
| scaffold6057 |
38167 |
38442 |
+ |
RS5953 |
Unspecified |
| scaffold6057 |
38439 |
38865 |
- |
PL645 |
Unspecified |
| scaffold6057 |
44300 |
44367 |
+ |
(A)n |
Simple_repeat |
| scaffold6057 |
46860 |
46907 |
+ |
A-rich |
Low_complexity |
| scaffold6057 |
47004 |
47027 |
+ |
(A)n |
Simple_repeat |
| scaffold6057 |
47426 |
47454 |
+ |
(T)n |
Simple_repeat |
| scaffold6057 |
47546 |
47565 |
+ |
(T)n |
Simple_repeat |
| scaffold6057 |
48562 |
48622 |
- |
PL856 |
Unspecified |
| scaffold6057 |
48927 |
48943 |
+ |
(T)n |
Simple_repeat |
| scaffold6057 |
49188 |
49568 |
- |
RS1337 |
Unspecified |
| scaffold6057 |
50044 |
50231 |
- |
RS10985 |
Unspecified |
| scaffold6057 |
50289 |
50311 |
+ |
(A)n |
Simple_repeat |
| scaffold6057 |
51318 |
51750 |
+ |
RS1641 |
Unspecified |
| scaffold6057 |
51832 |
51883 |
+ |
(AG)n |
Simple_repeat |
| scaffold6057 |
52847 |
52887 |
+ |
(AAT)n |
Simple_repeat |
| scaffold6057 |
53146 |
53183 |
+ |
(TTTCAT)n |
Simple_repeat |
| scaffold6057 |
53353 |
53587 |
- |
RS9843 |
Unspecified |
| scaffold6057 |
53612 |
53657 |
+ |
(GTATT)n |
Simple_repeat |
| scaffold6057 |
54121 |
54157 |
+ |
(T)n |
Simple_repeat |
| scaffold6057 |
54328 |
54371 |
+ |
(T)n |
Simple_repeat |
| scaffold6057 |
59696 |
59737 |
+ |
(ATATATT)n |
Simple_repeat |
| scaffold6057 |
64233 |
64320 |
+ |
(TTACTTT)n |
Simple_repeat |
| scaffold6057 |
64622 |
65360 |
+ |
PL789 |
Unspecified |
| scaffold6057 |
65869 |
65897 |
+ |
(ATTCA)n |
Simple_repeat |
| scaffold6057 |
66360 |
66388 |
+ |
(ATTCA)n |
Simple_repeat |
| scaffold6057 |
66489 |
66582 |
+ |
RS318 |
Unspecified |
| scaffold6057 |
66596 |
66769 |
+ |
RS509 |
Unspecified |
| scaffold6057 |
67250 |
67287 |
+ |
(ACAAAA)n |
Simple_repeat |
| scaffold6057 |
68036 |
69004 |
- |
RS454 |
Unspecified |
| scaffold6057 |
69084 |
69283 |
+ |
RS172 |
Unspecified |
| scaffold6057 |
70138 |
70233 |
- |
RS291 |
Unspecified |
| scaffold6057 |
70231 |
70298 |
+ |
(T)n |
Simple_repeat |
| scaffold6057 |
77168 |
79744 |
- |
gypsy |
gypsy(TransposonPSI) |
| scaffold6057 |
77181 |
77847 |
- |
Atlantys1_I-int |
LTR/Gypsy |
| scaffold6057 |
78111 |
78217 |
- |
Atlantys1_I-int |
LTR/Gypsy |
| scaffold6057 |
78294 |
78463 |
- |
Gypsy-38_Mad-I |
LTR/Gypsy |
| scaffold6057 |
79869 |
81193 |
- |
RS77 |
Unspecified |
| scaffold6057 |
81520 |
82010 |
+ |
RS894 |
Unspecified |
| scaffold6057 |
82179 |
82229 |
+ |
(TTTTTC)n |
Simple_repeat |
| scaffold6057 |
82398 |
82522 |
+ |
PL393 |
Unspecified |
| scaffold6057 |
82796 |
83147 |
- |
RS908 |
Unspecified |
| scaffold6057 |
83095 |
83160 |
- |
RS908 |
Unspecified |
| scaffold6057 |
83179 |
83637 |
+ |
Copia-32-I_VV |
LTR/Copia |
| scaffold6057 |
83593 |
83652 |
- |
Copia1-PTR_I-int |
LTR/Copia |
| scaffold6057 |
83960 |
84224 |
- |
RS1 |
Unspecified |
| scaffold6057 |
84130 |
84245 |
+ |
RS16358 |
Unspecified |
| scaffold6057 |
84326 |
84342 |
+ |
(A)n |
Simple_repeat |
| scaffold6057 |
84789 |
84886 |
+ |
RS3344 |
Unspecified |
| scaffold6057 |
84885 |
85017 |
- |
RS5719 |
Unspecified |
| scaffold6057 |
85036 |
85301 |
+ |
RS106 |
Unspecified |
| scaffold6057 |
86346 |
86389 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold6057 |
86520 |
86783 |
+ |
RS15074 |
Unspecified |
| scaffold6057 |
87143 |
87181 |
+ |
(T)n |
Simple_repeat |
| scaffold6057 |
87576 |
87716 |
+ |
RS3344 |
Unspecified |
| scaffold6057 |
88253 |
88663 |
- |
RS3014 |
Unspecified |
| scaffold6057 |
89120 |
89145 |
+ |
(ACAT)n |
Simple_repeat |
| scaffold6057 |
89218 |
89240 |
+ |
(TACA)n |
Simple_repeat |
| scaffold6057 |
89500 |
89981 |
+ |
RS944 |
Unspecified |
| scaffold6057 |
91702 |
91721 |
+ |
(T)n |
Simple_repeat |
| scaffold6057 |
92126 |
92143 |
+ |
(A)n |
Simple_repeat |
| scaffold6057 |
92268 |
92397 |
+ |
RS14486 |
Unspecified |
| scaffold6057 |
92670 |
92792 |
- |
RS3651 |
Unspecified |
| scaffold6057 |
93468 |
93563 |
+ |
(ACAA)n |
Simple_repeat |
| scaffold6057 |
94682 |
94788 |
- |
RS4475 |
Unspecified |
| scaffold6057 |
95011 |
95260 |
- |
RS4370 |
Unspecified |
| scaffold6057 |
95746 |
95944 |
- |
RS11642 |
Unspecified |
| scaffold6057 |
99949 |
100093 |
+ |
RS10678 |
Unspecified |
| scaffold6057 |
100046 |
100167 |
+ |
RS15074 |
Unspecified |
| scaffold6057 |
100130 |
100393 |
+ |
RS9467 |
Unspecified |
| scaffold6057 |
100561 |
100682 |
+ |
Copia-45_ZM-I |
LTR/Copia |
| scaffold6057 |
101379 |
101422 |
+ |
(TTTTA)n |
Simple_repeat |
| scaffold6057 |
102457 |
102473 |
+ |
(T)n |
Simple_repeat |
| scaffold6057 |
102566 |
102601 |
+ |
(AATATT)n |
Simple_repeat |
| scaffold6057 |
102885 |
103027 |
- |
RS15074 |
Unspecified |
| scaffold6057 |
103483 |
103535 |
+ |
(ATAGAA)n |
Simple_repeat |
| scaffold6057 |
103672 |
104051 |
- |
Copia-75_ST-I |
LTR/Copia |
| scaffold6057 |
104031 |
104476 |
+ |
PL459 |
Unspecified |