scaffold6148 Repeat List
genome |
start |
end |
strand |
repeat-name |
repeat-class |
scaffold6148 |
1 |
145 |
- |
PL294 |
Unspecified |
scaffold6148 |
368 |
391 |
+ |
(A)n |
Simple_repeat |
scaffold6148 |
522 |
569 |
+ |
(TA)n |
Simple_repeat |
scaffold6148 |
669 |
851 |
+ |
RS178 |
Unspecified |
scaffold6148 |
1159 |
2012 |
+ |
PL171 |
Unspecified |
scaffold6148 |
2460 |
2489 |
+ |
(ATCT)n |
Simple_repeat |
scaffold6148 |
2961 |
3225 |
- |
RS185 |
Unspecified |
scaffold6148 |
4845 |
4863 |
+ |
(T)n |
Simple_repeat |
scaffold6148 |
6173 |
6199 |
+ |
(CCG)n |
Simple_repeat |
scaffold6148 |
6568 |
6863 |
+ |
RS518 |
Unspecified |
scaffold6148 |
6946 |
6984 |
+ |
RS16152 |
Unspecified |
scaffold6148 |
7022 |
7112 |
+ |
(CTGAA)n |
Simple_repeat |
scaffold6148 |
7437 |
7738 |
+ |
(TTA)n |
Simple_repeat |
scaffold6148 |
7739 |
7761 |
+ |
(ATA)n |
Simple_repeat |
scaffold6148 |
7763 |
7886 |
+ |
(TGAAC)n |
Simple_repeat |
scaffold6148 |
9106 |
9159 |
+ |
(AATATAT)n |
Simple_repeat |
scaffold6148 |
9509 |
9536 |
+ |
(T)n |
Simple_repeat |
scaffold6148 |
9537 |
9543 |
+ |
(TTTATTA)n |
Simple_repeat |
scaffold6148 |
9748 |
9811 |
+ |
A-rich |
Low_complexity |
scaffold6148 |
9876 |
9893 |
+ |
(A)n |
Simple_repeat |
scaffold6148 |
10155 |
10200 |
+ |
(T)n |
Simple_repeat |
scaffold6148 |
13850 |
13868 |
+ |
(A)n |
Simple_repeat |
scaffold6148 |
15314 |
15542 |
+ |
RS10025 |
Unspecified |
scaffold6148 |
15807 |
15908 |
+ |
RS17919 |
Unspecified |
scaffold6148 |
16063 |
16216 |
+ |
(CCCGA)n |
Simple_repeat |
scaffold6148 |
16927 |
16987 |
+ |
(TAATA)n |
Simple_repeat |
scaffold6148 |
17940 |
18078 |
+ |
RS7491 |
Unspecified |
scaffold6148 |
18393 |
19251 |
- |
RS454 |
Unspecified |
scaffold6148 |
20016 |
20049 |
+ |
(TCTCAC)n |
Simple_repeat |
scaffold6148 |
20114 |
20141 |
+ |
(ATT)n |
Simple_repeat |
scaffold6148 |
20290 |
20332 |
+ |
(TTAATTT)n |
Simple_repeat |
scaffold6148 |
20314 |
20358 |
+ |
(ATTTTTAT)n |
Simple_repeat |
scaffold6148 |
22104 |
22130 |
+ |
(AATA)n |
Simple_repeat |
scaffold6148 |
22317 |
22422 |
+ |
(TATATT)n |
Simple_repeat |
scaffold6148 |
22424 |
22489 |
+ |
PL468 |
Unspecified |
scaffold6148 |
25175 |
25292 |
+ |
G-rich |
Low_complexity |
scaffold6148 |
28333 |
28388 |
+ |
GA-rich |
Low_complexity |
scaffold6148 |
28582 |
28631 |
+ |
G-rich |
Low_complexity |
scaffold6148 |
28756 |
29066 |
+ |
RS1496 |
Unspecified |
scaffold6148 |
29056 |
29869 |
+ |
RS5577 |
Unspecified |
scaffold6148 |
30040 |
30395 |
+ |
RS2947 |
Unspecified |
scaffold6148 |
30767 |
30883 |
+ |
RS3871 |
Unspecified |
scaffold6148 |
30975 |
31027 |
+ |
(ATGAA)n |
Simple_repeat |
scaffold6148 |
31455 |
31959 |
+ |
RS3415 |
Unspecified |
scaffold6148 |
32359 |
33119 |
+ |
RS2825 |
Unspecified |
scaffold6148 |
32728 |
33193 |
+ |
RS2551 |
Unspecified |
scaffold6148 |
33175 |
33261 |
+ |
RS1369 |
Unspecified |
scaffold6148 |
33275 |
33360 |
- |
RS187 |
Unspecified |
scaffold6148 |
33450 |
33487 |
+ |
(TTTA)n |
Simple_repeat |
scaffold6148 |
33572 |
33628 |
+ |
A-rich |
Low_complexity |
scaffold6148 |
33930 |
33961 |
+ |
(ATAA)n |
Simple_repeat |
scaffold6148 |
34196 |
34254 |
+ |
(TTTA)n |
Simple_repeat |
scaffold6148 |
34499 |
34603 |
- |
RS10164 |
Unspecified |
scaffold6148 |
34674 |
34901 |
+ |
RS10269 |
Unspecified |
scaffold6148 |
34675 |
34958 |
- |
RS13405 |
Unspecified |
scaffold6148 |
34888 |
35297 |
+ |
RS520 |
Unspecified |
scaffold6148 |
35700 |
35733 |
+ |
(ATTTTT)n |
Simple_repeat |
scaffold6148 |
35849 |
35875 |
+ |
(TATA)n |
Simple_repeat |
scaffold6148 |
36274 |
36386 |
+ |
GA-rich |
Low_complexity |
scaffold6148 |
36411 |
36484 |
+ |
A-rich |
Low_complexity |
scaffold6148 |
36561 |
36819 |
+ |
RS606 |
Unspecified |
scaffold6148 |
36814 |
37008 |
+ |
PL871 |
Unspecified |
scaffold6148 |
37518 |
37584 |
+ |
(TATAAT)n |
Simple_repeat |
scaffold6148 |
37781 |
38126 |
+ |
PL911 |
Unspecified |
scaffold6148 |
38128 |
38215 |
+ |
RS606 |
Unspecified |
scaffold6148 |
38567 |
38861 |
- |
RS1009 |
Unspecified |
scaffold6148 |
38867 |
39109 |
+ |
RS4 |
Unspecified |
scaffold6148 |
39098 |
39432 |
- |
RS1009 |
Unspecified |
scaffold6148 |
39381 |
39442 |
- |
RS187 |
Unspecified |
scaffold6148 |
39441 |
39825 |
- |
RS29 |
Unspecified |
scaffold6148 |
39835 |
39871 |
+ |
A-rich |
Low_complexity |
scaffold6148 |
40327 |
40580 |
+ |
(GGT)n |
Simple_repeat |
scaffold6148 |
40327 |
40367 |
+ |
(GGT)n |
Simple_repeat |
scaffold6148 |
40353 |
40594 |
+ |
(T)n |
Simple_repeat |
scaffold6148 |
40570 |
40594 |
+ |
(T)n |
Simple_repeat |
scaffold6148 |
40723 |
40942 |
- |
RS1009 |
Unspecified |
scaffold6148 |
40948 |
41189 |
+ |
RS4 |
Unspecified |
scaffold6148 |
41178 |
41499 |
- |
RS1009 |
Unspecified |
scaffold6148 |
41546 |
41576 |
+ |
(A)n |
Simple_repeat |
scaffold6148 |
41783 |
41883 |
- |
RS9298 |
Unspecified |
scaffold6148 |
41964 |
42090 |
- |
RS458 |
Unspecified |
scaffold6148 |
42089 |
42326 |
+ |
RS595 |
Unspecified |
scaffold6148 |
42192 |
42374 |
+ |
RS595 |
Unspecified |
scaffold6148 |
42806 |
42904 |
+ |
(T)n |
Simple_repeat |
scaffold6148 |
42806 |
42832 |
+ |
(T)n |
Simple_repeat |
scaffold6148 |
42820 |
42904 |
+ |
RS43 |
Unspecified |
scaffold6148 |
43374 |
43509 |
- |
RS5712 |
Unspecified |
scaffold6148 |
43904 |
43937 |
+ |
A-rich |
Low_complexity |
scaffold6148 |
44037 |
44098 |
- |
RS41 |
Unspecified |
scaffold6148 |
44255 |
44315 |
+ |
(GTT)n |
Simple_repeat |
scaffold6148 |
46315 |
46543 |
+ |
RS10025 |
Unspecified |
scaffold6148 |
47055 |
47084 |
+ |
(ACT)n |
Simple_repeat |
scaffold6148 |
47169 |
47263 |
+ |
(TTGATT)n |
Simple_repeat |
scaffold6148 |
47307 |
47402 |
+ |
RS16382 |
Unspecified |
scaffold6148 |
47401 |
47675 |
- |
RS14685 |
Unspecified |
scaffold6148 |
47695 |
48175 |
+ |
RS9611 |
Unspecified |
scaffold6148 |
48176 |
48215 |
+ |
(ATATTCA)n |
Simple_repeat |
scaffold6148 |
48350 |
48386 |
+ |
RS12040 |
Unspecified |
scaffold6148 |
49285 |
49470 |
+ |
RS15519 |
Unspecified |
scaffold6148 |
49524 |
49553 |
+ |
(AT)n |
Simple_repeat |
scaffold6148 |
49961 |
49997 |
+ |
A-rich |
Low_complexity |
scaffold6148 |
50454 |
50511 |
+ |
RS10025 |
Unspecified |
scaffold6148 |
50936 |
51037 |
+ |
RS17919 |
Unspecified |
scaffold6148 |
51193 |
51203 |
+ |
(CCCGA)n |
Simple_repeat |
scaffold6148 |
51204 |
51341 |
+ |
(ACCTG)n |
Simple_repeat |
scaffold6148 |
51342 |
51349 |
+ |
(CCCGA)n |
Simple_repeat |
scaffold6148 |
52039 |
52080 |
+ |
(TTTAT)n |
Simple_repeat |
scaffold6148 |
52340 |
52452 |
+ |
RS12040 |
Unspecified |
scaffold6148 |
53350 |
53535 |
+ |
RS15519 |
Unspecified |
scaffold6148 |
53588 |
53617 |
+ |
(AT)n |
Simple_repeat |
scaffold6148 |
54025 |
54061 |
+ |
A-rich |
Low_complexity |
scaffold6148 |
54638 |
54919 |
- |
RS214 |
Unspecified |
scaffold6148 |
55166 |
55241 |
- |
RS3110 |
Unspecified |
scaffold6148 |
55244 |
55328 |
+ |
RS9082 |
Unspecified |
scaffold6148 |
56377 |
57801 |
- |
LINE |
LINE(TransposonPSI) |
scaffold6148 |
56690 |
57462 |
- |
LINE1I_MT |
LINE/L1 |
scaffold6148 |
57669 |
57776 |
- |
VLINE1_VV |
LINE/L1 |
scaffold6148 |
57960 |
57992 |
+ |
(A)n |
Simple_repeat |
scaffold6148 |
58123 |
58159 |
+ |
(A)n |
Simple_repeat |
scaffold6148 |
58330 |
58555 |
- |
RS9096 |
Unspecified |
scaffold6148 |
58702 |
58829 |
- |
RS7814 |
Unspecified |
scaffold6148 |
59026 |
59074 |
- |
Copia10-VV_LTR |
LTR/Copia |
scaffold6148 |
59353 |
59455 |
- |
RS13773 |
Unspecified |
scaffold6148 |
59628 |
61465 |
+ |
SHALINE10_MT |
LINE/L1 |
scaffold6148 |
61905 |
62039 |
- |
LTR-1_SBi-LTR |
LTR |
scaffold6148 |
62641 |
62791 |
- |
LTR-1_SBi-LTR |
LTR |