scaffold6198 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold6198 |
1 |
276 |
- |
RS1775 |
Unspecified |
| scaffold6198 |
180 |
385 |
- |
RS1357 |
Unspecified |
| scaffold6198 |
259 |
409 |
+ |
RS1052 |
Unspecified |
| scaffold6198 |
270 |
488 |
+ |
GA-rich |
Low_complexity |
| scaffold6198 |
418 |
488 |
+ |
GA-rich |
Low_complexity |
| scaffold6198 |
652 |
684 |
+ |
GA-rich |
Low_complexity |
| scaffold6198 |
752 |
851 |
+ |
(GTT)n |
Simple_repeat |
| scaffold6198 |
866 |
911 |
+ |
GA-rich |
Low_complexity |
| scaffold6198 |
1348 |
1399 |
+ |
(AATAT)n |
Simple_repeat |
| scaffold6198 |
1663 |
3251 |
- |
SHACOP6_I_MT-int |
LTR/Copia |
| scaffold6198 |
3646 |
4501 |
- |
SHACOP6_I_MT-int |
LTR/Copia |
| scaffold6198 |
4776 |
4848 |
- |
SHACOP6_I_MT-int |
LTR/Copia |
| scaffold6198 |
4966 |
5004 |
- |
SHACOP6_I_MT-int |
LTR/Copia |
| scaffold6198 |
4971 |
5007 |
- |
Tvv1_I-int |
LTR/Copia |
| scaffold6198 |
5499 |
6116 |
- |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold6198 |
5707 |
5862 |
- |
SHACOP6_I_MT-int |
LTR/Copia |
| scaffold6198 |
6242 |
6294 |
+ |
(AAC)n |
Simple_repeat |
| scaffold6198 |
8169 |
8236 |
+ |
(T)n |
Simple_repeat |
| scaffold6198 |
8527 |
8682 |
- |
RS159 |
Unspecified |
| scaffold6198 |
8891 |
9360 |
- |
PL582 |
Unspecified |
| scaffold6198 |
9504 |
9533 |
+ |
(AACCT)n |
Simple_repeat |
| scaffold6198 |
9970 |
9998 |
+ |
(T)n |
Simple_repeat |
| scaffold6198 |
11218 |
11343 |
+ |
RS15705 |
Unspecified |
| scaffold6198 |
13575 |
13599 |
+ |
(ATT)n |
Simple_repeat |
| scaffold6198 |
15028 |
15249 |
+ |
RS10026 |
Unspecified |
| scaffold6198 |
15387 |
15943 |
+ |
RS4084 |
Unspecified |
| scaffold6198 |
15762 |
16137 |
+ |
RS5634 |
Unspecified |
| scaffold6198 |
16235 |
16528 |
+ |
RS4185 |
Unspecified |
| scaffold6198 |
16566 |
16700 |
+ |
RS4739 |
Unspecified |
| scaffold6198 |
16973 |
17684 |
- |
RS3761 |
Unspecified |
| scaffold6198 |
17686 |
17726 |
+ |
RS4359 |
Unspecified |
| scaffold6198 |
18021 |
18075 |
+ |
(A)n |
Simple_repeat |
| scaffold6198 |
20086 |
20814 |
+ |
RS516 |
Unspecified |
| scaffold6198 |
20813 |
20931 |
+ |
(TTA)n |
Simple_repeat |
| scaffold6198 |
20940 |
20975 |
+ |
(ATATT)n |
Simple_repeat |
| scaffold6198 |
20976 |
21018 |
+ |
(TTTTA)n |
Simple_repeat |
| scaffold6198 |
21021 |
21250 |
- |
RS12703 |
Unspecified |
| scaffold6198 |
22718 |
23030 |
- |
RS1789 |
Unspecified |
| scaffold6198 |
23298 |
23453 |
- |
MuDR_A_B |
MuDR_A_B(TransposonPSI) |
| scaffold6198 |
24221 |
24529 |
- |
RS1092 |
Unspecified |
| scaffold6198 |
24375 |
24816 |
- |
RS1148 |
Unspecified |
| scaffold6198 |
24851 |
24917 |
+ |
(AATTC)n |
Simple_repeat |
| scaffold6198 |
25061 |
25093 |
+ |
A-rich |
Low_complexity |
| scaffold6198 |
25136 |
25168 |
+ |
(AAATT)n |
Simple_repeat |
| scaffold6198 |
25287 |
25384 |
+ |
(GGT)n |
Simple_repeat |
| scaffold6198 |
26878 |
26920 |
+ |
(TAATATA)n |
Simple_repeat |
| scaffold6198 |
27005 |
27040 |
+ |
(TTTAATT)n |
Simple_repeat |
| scaffold6198 |
27219 |
27429 |
- |
RS10 |
Unspecified |
| scaffold6198 |
28060 |
28088 |
+ |
(CT)n |
Simple_repeat |
| scaffold6198 |
28167 |
28637 |
+ |
RS2397 |
Unspecified |
| scaffold6198 |
28684 |
29255 |
- |
RS5261 |
Unspecified |
| scaffold6198 |
28937 |
29409 |
+ |
RS852 |
Unspecified |
| scaffold6198 |
29557 |
29717 |
- |
RS5262 |
Unspecified |
| scaffold6198 |
29612 |
29851 |
+ |
RS1374 |
Unspecified |
| scaffold6198 |
29804 |
30187 |
+ |
RS852 |
Unspecified |
| scaffold6198 |
30214 |
30279 |
+ |
A-rich |
Low_complexity |
| scaffold6198 |
30326 |
30377 |
+ |
(ATC)n |
Simple_repeat |
| scaffold6198 |
30326 |
30558 |
+ |
(ATC)n |
Simple_repeat |
| scaffold6198 |
30358 |
30558 |
- |
RS7866 |
Unspecified |
| scaffold6198 |
30701 |
30725 |
+ |
(AG)n |
Simple_repeat |
| scaffold6198 |
30903 |
31245 |
+ |
RS2480 |
Unspecified |
| scaffold6198 |
31247 |
31333 |
+ |
(TCA)n |
Simple_repeat |
| scaffold6198 |
31556 |
31777 |
- |
EnSpm-2_STu |
DNA/CMC-EnSpm |
| scaffold6198 |
32125 |
32151 |
+ |
(TAAT)n |
Simple_repeat |
| scaffold6198 |
32406 |
33270 |
- |
EnSpm-2_STu |
DNA/CMC-EnSpm |
| scaffold6198 |
33178 |
33286 |
- |
EnSpm-43_SBi |
DNA/En-Spm |
| scaffold6198 |
33461 |
34005 |
- |
EnSpm-6_STu |
DNA/CMC-EnSpm |
| scaffold6198 |
33601 |
34058 |
- |
EnSpm-43_SBi |
DNA/En-Spm |
| scaffold6198 |
34409 |
34479 |
- |
EnSpm-6_STu |
DNA/CMC-EnSpm |
| scaffold6198 |
34794 |
34856 |
- |
RS7869 |
Unspecified |
| scaffold6198 |
34809 |
35080 |
- |
RS7869 |
Unspecified |
| scaffold6198 |
35079 |
36035 |
+ |
PL129 |
Unspecified |
| scaffold6198 |
36254 |
36280 |
+ |
(TTTGT)n |
Simple_repeat |
| scaffold6198 |
36394 |
37014 |
- |
RS121 |
Unspecified |
| scaffold6198 |
36542 |
37644 |
- |
RS247 |
Unspecified |
| scaffold6198 |
37351 |
37826 |
- |
RS247 |
Unspecified |
| scaffold6198 |
37829 |
38004 |
+ |
RS709 |
Unspecified |
| scaffold6198 |
37990 |
39271 |
+ |
RS149 |
Unspecified |
| scaffold6198 |
39010 |
39372 |
+ |
RS911 |
Unspecified |
| scaffold6198 |
39288 |
39561 |
- |
RS192 |
Unspecified |
| scaffold6198 |
39382 |
39650 |
- |
RS192 |
Unspecified |
| scaffold6198 |
39423 |
39701 |
- |
RS192 |
Unspecified |
| scaffold6198 |
39618 |
40845 |
+ |
RS195 |
Unspecified |
| scaffold6198 |
43600 |
44197 |
- |
PL743 |
Unspecified |
| scaffold6198 |
45141 |
45237 |
+ |
(ATTT)n |
Simple_repeat |
| scaffold6198 |
45851 |
46198 |
+ |
RS935 |
Unspecified |
| scaffold6198 |
46283 |
46311 |
+ |
(A)n |
Simple_repeat |
| scaffold6198 |
46443 |
46524 |
+ |
ATENSPM1A |
DNA/CMC-EnSpm |
| scaffold6198 |
46934 |
47058 |
+ |
(CGC)n |
Simple_repeat |
| scaffold6198 |
47099 |
47552 |
+ |
(TTTAA)n |
Simple_repeat |
| scaffold6198 |
47959 |
48062 |
- |
RS5713 |
Unspecified |
| scaffold6198 |
48000 |
48384 |
+ |
RS5713 |
Unspecified |
| scaffold6198 |
48865 |
49780 |
+ |
EnSpm-1_EPa |
DNA/CMC-EnSpm |
| scaffold6198 |
49872 |
50006 |
+ |
ENSPM_MT |
DNA/CMC-EnSpm |
| scaffold6198 |
50767 |
50818 |
+ |
(AT)n |
Simple_repeat |
| scaffold6198 |
50818 |
50848 |
+ |
PL5 |
Unspecified |
| scaffold6198 |
51169 |
51214 |
+ |
(CACGAAACTT)n |
Simple_repeat |
| scaffold6198 |
51791 |
51982 |
+ |
EnSpm-3_STu |
DNA/CMC-EnSpm |
| scaffold6198 |
52194 |
52246 |
+ |
(TTTAATG)n |
Simple_repeat |
| scaffold6198 |
52232 |
52266 |
+ |
(ATAAT)n |
Simple_repeat |
| scaffold6198 |
52446 |
52991 |
+ |
RS1136 |
Unspecified |
| scaffold6198 |
53034 |
53108 |
+ |
(TG)n |
Simple_repeat |
| scaffold6198 |
54273 |
54369 |
+ |
ATENSPM4 |
DNA/CMC-EnSpm |
| scaffold6198 |
54430 |
54450 |
+ |
(A)n |
Simple_repeat |
| scaffold6198 |
54690 |
54730 |
+ |
A-rich |
Low_complexity |
| scaffold6198 |
54915 |
54959 |
+ |
A-rich |
Low_complexity |
| scaffold6198 |
54917 |
54954 |
+ |
GA-rich |
Low_complexity |
| scaffold6198 |
55536 |
55619 |
+ |
A-rich |
Low_complexity |
| scaffold6198 |
57133 |
57150 |
+ |
(A)n |
Simple_repeat |
| scaffold6198 |
57358 |
57404 |
+ |
(TTAAGT)n |
Simple_repeat |
| scaffold6198 |
57594 |
57765 |
- |
RS8078 |
Unspecified |
| scaffold6198 |
57770 |
57786 |
+ |
(TTG)n |
Simple_repeat |
| scaffold6198 |
57787 |
57838 |
+ |
(TGTAG)n |
Simple_repeat |
| scaffold6198 |
57839 |
57886 |
+ |
(TTG)n |
Simple_repeat |
| scaffold6198 |
58816 |
58894 |
+ |
(TGA)n |
Simple_repeat |
| scaffold6198 |
59989 |
60034 |
+ |
(CAAG)n |
Simple_repeat |
| scaffold6198 |
61642 |
61708 |
+ |
(TTCTT)n |
Simple_repeat |
| scaffold6198 |
62418 |
62456 |
+ |
A-rich |
Low_complexity |
| scaffold6198 |
62685 |
62724 |
+ |
(CATCGT)n |
Simple_repeat |
| scaffold6198 |
62895 |
63570 |
- |
PIGY-I_PS |
LTR/Gypsy |
| scaffold6198 |
63620 |
63729 |
- |
RS30 |
Unspecified |
| scaffold6198 |
64063 |
64114 |
+ |
(CAT)n |
Simple_repeat |
| scaffold6198 |
64344 |
64942 |
- |
PIGY-I_PS |
LTR/Gypsy |
| scaffold6198 |
65085 |
65515 |
+ |
RS1930 |
Unspecified |
| scaffold6198 |
65510 |
65731 |
- |
RS1686 |
Unspecified |
| scaffold6198 |
65730 |
67822 |
- |
RS186 |
Unspecified |
| scaffold6198 |
68019 |
68076 |
+ |
(TTTAT)n |
Simple_repeat |
| scaffold6198 |
69721 |
69800 |
- |
Atlantys1_I-int |
LTR/Gypsy |
| scaffold6198 |
71111 |
71331 |
+ |
RS3014 |
Unspecified |
| scaffold6198 |
71691 |
71845 |
+ |
(TATAAGCA)n |
Simple_repeat |
| scaffold6198 |
73548 |
73603 |
+ |
COP14_I_MT-int |
LTR/Copia |
| scaffold6198 |
74075 |
74123 |
+ |
(TTAAT)n |
Simple_repeat |
| scaffold6198 |
74755 |
74849 |
+ |
(ATAA)n |
Simple_repeat |
| scaffold6198 |
74966 |
75124 |
+ |
RS3356 |
Unspecified |
| scaffold6198 |
77317 |
77923 |
+ |
PL219 |
Unspecified |
| scaffold6198 |
78608 |
78840 |
+ |
ATHILA-6_SBi-I |
LTR/Gypsy |
| scaffold6198 |
79027 |
79101 |
- |
PL945 |
Unspecified |
| scaffold6198 |
79098 |
79507 |
+ |
RS3329 |
Unspecified |
| scaffold6198 |
79689 |
80181 |
+ |
PIGY-I_PS |
LTR/Gypsy |
| scaffold6198 |
80168 |
81142 |
- |
RS1819 |
Unspecified |
| scaffold6198 |
82323 |
82594 |
+ |
RS1210 |
Unspecified |
| scaffold6198 |
82482 |
83151 |
+ |
RS269 |
Unspecified |
| scaffold6198 |
82613 |
83212 |
+ |
PL219 |
Unspecified |
| scaffold6198 |
83306 |
83378 |
+ |
A-rich |
Low_complexity |
| scaffold6198 |
83739 |
85122 |
- |
Gypsy-7_CP-I |
LTR/Gypsy |
| scaffold6198 |
85358 |
85486 |
+ |
PL124 |
Unspecified |