scaffold6207 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold6207 |
4 |
901 |
- |
PL933 |
Unspecified |
| scaffold6207 |
861 |
1047 |
+ |
RS158 |
Unspecified |
| scaffold6207 |
1771 |
2630 |
+ |
RS118 |
Unspecified |
| scaffold6207 |
2637 |
2797 |
- |
RS830 |
Unspecified |
| scaffold6207 |
2725 |
3459 |
+ |
RS530 |
Unspecified |
| scaffold6207 |
2817 |
3561 |
+ |
RS695 |
Unspecified |
| scaffold6207 |
2866 |
3499 |
+ |
PL219 |
Unspecified |
| scaffold6207 |
4310 |
4342 |
+ |
(GGCC)n |
Simple_repeat |
| scaffold6207 |
6203 |
6510 |
+ |
RS10321 |
Unspecified |
| scaffold6207 |
6684 |
8396 |
- |
LINE |
LINE(TransposonPSI) |
| scaffold6207 |
6820 |
7613 |
- |
LINE1-66_SBi |
LINE/L1 |
| scaffold6207 |
8608 |
8651 |
+ |
(CTCCAG)n |
Simple_repeat |
| scaffold6207 |
8779 |
8838 |
+ |
A-rich |
Low_complexity |
| scaffold6207 |
8833 |
8863 |
+ |
(TAATGA)n |
Simple_repeat |
| scaffold6207 |
9967 |
10009 |
+ |
(AATTAT)n |
Simple_repeat |
| scaffold6207 |
11536 |
11589 |
- |
RS5316 |
Unspecified |
| scaffold6207 |
11812 |
11848 |
+ |
(TTTATGT)n |
Simple_repeat |
| scaffold6207 |
12687 |
12730 |
+ |
(TTCAA)n |
Simple_repeat |
| scaffold6207 |
12738 |
12782 |
+ |
(TTA)n |
Simple_repeat |
| scaffold6207 |
12785 |
12939 |
+ |
(TTG)n |
Simple_repeat |
| scaffold6207 |
12972 |
15179 |
+ |
(T)n |
Simple_repeat |
| scaffold6207 |
15141 |
15179 |
+ |
(T)n |
Simple_repeat |
| scaffold6207 |
15917 |
16213 |
- |
RS90 |
Unspecified |
| scaffold6207 |
16038 |
16319 |
+ |
RS2985 |
Unspecified |
| scaffold6207 |
16987 |
17220 |
- |
gypsy |
gypsy(TransposonPSI) |
| scaffold6207 |
17210 |
18211 |
+ |
RS123 |
Unspecified |
| scaffold6207 |
18291 |
20643 |
- |
RIRE1_I-int |
LTR/Copia |
| scaffold6207 |
20779 |
20991 |
- |
RIRE1_I-int |
LTR/Copia |
| scaffold6207 |
21273 |
21308 |
+ |
(GGCC)n |
Simple_repeat |
| scaffold6207 |
21403 |
21455 |
+ |
(TTTAG)n |
Simple_repeat |
| scaffold6207 |
22018 |
22065 |
+ |
(TATTTA)n |
Simple_repeat |
| scaffold6207 |
22941 |
23074 |
+ |
PIGY-LTR_PS |
LTR/Gypsy |
| scaffold6207 |
23340 |
23478 |
+ |
RS4884 |
Unspecified |
| scaffold6207 |
23620 |
23658 |
+ |
(AACTACC)n |
Simple_repeat |
| scaffold6207 |
24208 |
24667 |
+ |
PIGY-I_PS |
LTR/Gypsy |
| scaffold6207 |
25427 |
25463 |
+ |
(CCGG)n |
Simple_repeat |
| scaffold6207 |
25744 |
25776 |
+ |
(TTTTCA)n |
Simple_repeat |
| scaffold6207 |
25900 |
25980 |
+ |
(TTGAT)n |
Simple_repeat |
| scaffold6207 |
26486 |
26570 |
+ |
A-rich |
Low_complexity |
| scaffold6207 |
27030 |
27074 |
+ |
(A)n |
Simple_repeat |
| scaffold6207 |
27183 |
27222 |
+ |
(TGAGT)n |
Simple_repeat |
| scaffold6207 |
28008 |
28047 |
+ |
(GCCG)n |
Simple_repeat |
| scaffold6207 |
28771 |
28836 |
+ |
(ATAATAC)n |
Simple_repeat |
| scaffold6207 |
29065 |
29370 |
- |
TPN1_IN |
DNA/CMC-EnSpm |
| scaffold6207 |
31623 |
31666 |
+ |
(CACACCT)n |
Simple_repeat |
| scaffold6207 |
32085 |
32179 |
+ |
(TGA)n |
Simple_repeat |
| scaffold6207 |
32300 |
32590 |
+ |
RS9793 |
Unspecified |
| scaffold6207 |
32598 |
32778 |
- |
RS616 |
Unspecified |
| scaffold6207 |
33477 |
33565 |
- |
RS4259 |
Unspecified |
| scaffold6207 |
35048 |
35142 |
+ |
(TGA)n |
Simple_repeat |
| scaffold6207 |
35337 |
35361 |
+ |
(TAT)n |
Simple_repeat |
| scaffold6207 |
35925 |
35981 |
+ |
(ATATT)n |
Simple_repeat |
| scaffold6207 |
36299 |
36664 |
+ |
PL255 |
Unspecified |
| scaffold6207 |
36794 |
36852 |
+ |
(ATATTTT)n |
Simple_repeat |
| scaffold6207 |
37109 |
37290 |
- |
RS1334 |
Unspecified |
| scaffold6207 |
37920 |
38290 |
- |
PL400 |
Unspecified |
| scaffold6207 |
39318 |
39349 |
+ |
(ATT)n |
Simple_repeat |
| scaffold6207 |
39607 |
39644 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold6207 |
41132 |
41162 |
+ |
(ACCCG)n |
Simple_repeat |
| scaffold6207 |
41736 |
41903 |
+ |
PL706 |
Unspecified |
| scaffold6207 |
44555 |
45711 |
+ |
LINE1-60_SBi |
LINE/L1 |
| scaffold6207 |
45800 |
46173 |
+ |
LINE1-60_SBi |
LINE/L1 |
| scaffold6207 |
47656 |
47695 |
+ |
(A)n |
Simple_repeat |
| scaffold6207 |
47785 |
48177 |
+ |
PL436 |
Unspecified |
| scaffold6207 |
48195 |
48234 |
+ |
A-rich |
Low_complexity |
| scaffold6207 |
48472 |
48837 |
- |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold6207 |
49373 |
49411 |
+ |
A-rich |
Low_complexity |
| scaffold6207 |
50492 |
51615 |
- |
RS88 |
Unspecified |
| scaffold6207 |
51119 |
52111 |
- |
RS249 |
Unspecified |
| scaffold6207 |
51296 |
52111 |
+ |
RS2298 |
Unspecified |
| scaffold6207 |
52697 |
52852 |
+ |
RS6506 |
Unspecified |
| scaffold6207 |
52852 |
53106 |
- |
RS2106 |
Unspecified |
| scaffold6207 |
53302 |
53583 |
- |
PL438 |
Unspecified |
| scaffold6207 |
53488 |
53595 |
+ |
PL803 |
Unspecified |
| scaffold6207 |
53585 |
53799 |
+ |
RS42 |
Unspecified |
| scaffold6207 |
54147 |
54189 |
+ |
(T)n |
Simple_repeat |
| scaffold6207 |
54632 |
54660 |
+ |
(T)n |
Simple_repeat |
| scaffold6207 |
54997 |
55038 |
+ |
A-rich |
Low_complexity |
| scaffold6207 |
56039 |
56104 |
- |
RS542 |
Unspecified |
| scaffold6207 |
56101 |
56145 |
- |
RS14620 |
Unspecified |
| scaffold6207 |
56131 |
56189 |
+ |
RS542 |
Unspecified |
| scaffold6207 |
56303 |
56344 |
+ |
A-rich |
Low_complexity |
| scaffold6207 |
56691 |
56781 |
+ |
RS9061 |
Unspecified |
| scaffold6207 |
56714 |
56813 |
- |
RS8136 |
Unspecified |
| scaffold6207 |
57205 |
57855 |
+ |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold6207 |
57219 |
57386 |
+ |
Copia-39_SB-I |
LTR/Copia |
| scaffold6207 |
58047 |
61348 |
+ |
Copia-39_SB-I |
LTR/Copia |
| scaffold6207 |
61655 |
61691 |
+ |
(TTC)n |
Simple_repeat |
| scaffold6207 |
61692 |
61741 |
+ |
(TTA)n |
Simple_repeat |
| scaffold6207 |
61812 |
61970 |
- |
RS14620 |
Unspecified |
| scaffold6207 |
61956 |
62085 |
+ |
RS542 |
Unspecified |
| scaffold6207 |
62153 |
62184 |
+ |
(T)n |
Simple_repeat |
| scaffold6207 |
63015 |
63066 |
+ |
A-rich |
Low_complexity |
| scaffold6207 |
63265 |
63306 |
+ |
(ATTAATT)n |
Simple_repeat |
| scaffold6207 |
63522 |
63574 |
+ |
A-rich |
Low_complexity |
| scaffold6207 |
64182 |
64221 |
+ |
(ATAATAT)n |
Simple_repeat |
| scaffold6207 |
64561 |
64594 |
+ |
(AAATTGC)n |
Simple_repeat |
| scaffold6207 |
64638 |
64666 |
+ |
(TTATT)n |
Simple_repeat |
| scaffold6207 |
66829 |
67098 |
- |
RS1 |
Unspecified |
| scaffold6207 |
67244 |
67389 |
+ |
RS1082 |
Unspecified |
| scaffold6207 |
68060 |
68112 |
+ |
(TTTCACA)n |
Simple_repeat |
| scaffold6207 |
68487 |
68521 |
+ |
(T)n |
Simple_repeat |
| scaffold6207 |
69120 |
69149 |
+ |
(T)n |
Simple_repeat |
| scaffold6207 |
71378 |
72184 |
- |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold6207 |
71399 |
71471 |
- |
Copia-31_GM-I |
LTR/Copia |
| scaffold6207 |
71638 |
71778 |
- |
Copia-31_GM-I |
LTR/Copia |
| scaffold6207 |
72394 |
72836 |
- |
Copia-31_GM-I |
LTR/Copia |
| scaffold6207 |
73435 |
73572 |
+ |
RS4203 |
Unspecified |
| scaffold6207 |
73610 |
73715 |
+ |
RS175 |
Unspecified |
| scaffold6207 |
74277 |
74627 |
- |
LINE |
LINE(TransposonPSI) |
| scaffold6207 |
74666 |
75613 |
- |
LINE |
LINE(TransposonPSI) |
| scaffold6207 |
76010 |
76053 |
+ |
(TGAAGAT)n |
Simple_repeat |
| scaffold6207 |
76188 |
76234 |
+ |
(ATTTAG)n |
Simple_repeat |
| scaffold6207 |
76272 |
76301 |
+ |
(TATT)n |
Simple_repeat |
| scaffold6207 |
76518 |
76559 |
- |
RS1089 |
Unspecified |
| scaffold6207 |
76559 |
76833 |
- |
PL476 |
Unspecified |
| scaffold6207 |
76981 |
77041 |
+ |
(ATTTAGT)n |
Simple_repeat |
| scaffold6207 |
77248 |
77324 |
+ |
(ATT)n |
Simple_repeat |
| scaffold6207 |
77356 |
77541 |
+ |
(CCCGA)n |
Simple_repeat |
| scaffold6207 |
77717 |
77908 |
+ |
(CCCGA)n |
Simple_repeat |
| scaffold6207 |
79658 |
79699 |
+ |
(CGAGTCC)n |
Simple_repeat |
| scaffold6207 |
80235 |
80729 |
+ |
Gypsy9-VV_I-int |
LTR/Gypsy |
| scaffold6207 |
82794 |
82835 |
+ |
(CGAGTCC)n |
Simple_repeat |
| scaffold6207 |
83042 |
83219 |
+ |
(TCGGG)n |
Simple_repeat |
| scaffold6207 |
83366 |
83571 |
+ |
(TCGGG)n |
Simple_repeat |
| scaffold6207 |
84582 |
84606 |
+ |
(T)n |
Simple_repeat |
| scaffold6207 |
84649 |
84790 |
- |
RS4197 |
Unspecified |
| scaffold6207 |
84649 |
84775 |
- |
RS1074 |
Unspecified |
| scaffold6207 |
85407 |
85588 |
+ |
RS5570 |
Unspecified |
| scaffold6207 |
85775 |
87359 |
- |
Copia-16_CP-I |
LTR/Copia |
| scaffold6207 |
87765 |
88618 |
- |
Copia-16_CP-I |
LTR/Copia |
| scaffold6207 |
88891 |
88948 |
- |
Copia-16_CP-I |
LTR/Copia |
| scaffold6207 |
89076 |
89110 |
- |
Copia-51_ST-I |
LTR/Copia |
| scaffold6207 |
89127 |
90191 |
- |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold6207 |
89606 |
89750 |
- |
Copia-51_ST-I |
LTR/Copia |
| scaffold6207 |
90455 |
90636 |
+ |
RS5570 |
Unspecified |
| scaffold6207 |
91578 |
91798 |
- |
RS16888 |
Unspecified |
| scaffold6207 |
92773 |
92833 |
+ |
(AT)n |
Simple_repeat |
| scaffold6207 |
92865 |
92897 |
+ |
A-rich |
Low_complexity |
| scaffold6207 |
93222 |
93312 |
+ |
(ATTGTG)n |
Simple_repeat |
| scaffold6207 |
93849 |
94098 |
- |
RS7480 |
Unspecified |
| scaffold6207 |
94129 |
94189 |
+ |
(AGTTC)n |
Simple_repeat |
| scaffold6207 |
94218 |
94327 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold6207 |
94544 |
94744 |
- |
PL269 |
Unspecified |
| scaffold6207 |
95445 |
95473 |
+ |
(ATC)n |
Simple_repeat |
| scaffold6207 |
97874 |
98096 |
- |
RS126 |
Unspecified |
| scaffold6207 |
98491 |
99103 |
- |
RS402 |
Unspecified |
| scaffold6207 |
100601 |
100639 |
- |
RS4 |
Unspecified |
| scaffold6207 |
100630 |
100904 |
- |
PL501 |
Unspecified |
| scaffold6207 |
100903 |
101165 |
+ |
RS240 |
Unspecified |
| scaffold6207 |
101164 |
101384 |
+ |
PL271 |
Unspecified |
| scaffold6207 |
101378 |
101585 |
- |
RS4 |
Unspecified |
| scaffold6207 |
101647 |
101815 |
+ |
RS7374 |
Unspecified |
| scaffold6207 |
101984 |
102025 |
+ |
(T)n |
Simple_repeat |
| scaffold6207 |
102309 |
102337 |
+ |
A-rich |
Low_complexity |
| scaffold6207 |
102506 |
102523 |
+ |
(T)n |
Simple_repeat |
| scaffold6207 |
102523 |
102844 |
+ |
RS8 |
Unspecified |
| scaffold6207 |
102863 |
102887 |
+ |
(A)n |
Simple_repeat |
| scaffold6207 |
103044 |
103450 |
- |
RS458 |
Unspecified |
| scaffold6207 |
103481 |
103499 |
+ |
(A)n |
Simple_repeat |
| scaffold6207 |
104335 |
104389 |
- |
RS4164 |
Unspecified |
| scaffold6207 |
104344 |
104452 |
+ |
RS3355 |
Unspecified |
| scaffold6207 |
104360 |
104572 |
- |
RS4164 |
Unspecified |
| scaffold6207 |
104594 |
104633 |
+ |
(T)n |
Simple_repeat |
| scaffold6207 |
104859 |
104892 |
+ |
(ATATTG)n |
Simple_repeat |
| scaffold6207 |
104923 |
104956 |
+ |
(TTTTTA)n |
Simple_repeat |
| scaffold6207 |
105139 |
105173 |
+ |
(ATATAT)n |
Simple_repeat |
| scaffold6207 |
105322 |
105539 |
- |
RS507 |
Unspecified |
| scaffold6207 |
105749 |
106319 |
- |
Copia-71_VV-I |
LTR/Copia |
| scaffold6207 |
106313 |
106480 |
- |
Copia-71_VV-I |
LTR/Copia |
| scaffold6207 |
106484 |
106683 |
- |
RS2987 |
Unspecified |
| scaffold6207 |
106598 |
106699 |
- |
RS9218 |
Unspecified |
| scaffold6207 |
106710 |
107192 |
+ |
RS1152 |
Unspecified |
| scaffold6207 |
107109 |
107414 |
+ |
RS4187 |
Unspecified |
| scaffold6207 |
107512 |
107708 |
- |
RS2987 |
Unspecified |
| scaffold6207 |
107644 |
107724 |
- |
RS9218 |
Unspecified |
| scaffold6207 |
107960 |
108011 |
+ |
A-rich |
Low_complexity |
| scaffold6207 |
108297 |
108342 |
+ |
(TTA)n |
Simple_repeat |
| scaffold6207 |
108548 |
109124 |
+ |
RS3932 |
Unspecified |
| scaffold6207 |
109132 |
109216 |
- |
Copia-71_VV-I |
LTR/Copia |
| scaffold6207 |
109330 |
109463 |
- |
RS10034 |
Unspecified |
| scaffold6207 |
109550 |
109574 |
+ |
(A)n |
Simple_repeat |
| scaffold6207 |
109706 |
110289 |
- |
PL268 |
Unspecified |
| scaffold6207 |
111152 |
111200 |
+ |
A-rich |
Low_complexity |
| scaffold6207 |
112018 |
112337 |
+ |
RS6911 |
Unspecified |
| scaffold6207 |
112421 |
112432 |
+ |
(ATATTT)n |
Simple_repeat |
| scaffold6207 |
112433 |
112482 |
+ |
(ATTAATA)n |
Simple_repeat |
| scaffold6207 |
112558 |
112779 |
+ |
RS6718 |
Unspecified |
| scaffold6207 |
112789 |
112957 |
+ |
RS3321 |
Unspecified |
| scaffold6207 |
113163 |
113394 |
+ |
RS9059 |
Unspecified |
| scaffold6207 |
113908 |
113998 |
+ |
RS1678 |
Unspecified |
| scaffold6207 |
114005 |
114121 |
+ |
RS16108 |
Unspecified |
| scaffold6207 |
114429 |
114521 |
+ |
(GGT)n |
Simple_repeat |
| scaffold6207 |
114528 |
114595 |
+ |
(TC)n |
Simple_repeat |
| scaffold6207 |
114589 |
114618 |
+ |
(T)n |
Simple_repeat |
| scaffold6207 |
114714 |
114965 |
- |
RS734 |
Unspecified |
| scaffold6207 |
116433 |
117968 |
+ |
LINE |
LINE(TransposonPSI) |
| scaffold6207 |
117969 |
118165 |
+ |
RS7206 |
Unspecified |
| scaffold6207 |
118265 |
118359 |
+ |
RS381 |
Unspecified |
| scaffold6207 |
118383 |
119010 |
- |
RS632 |
Unspecified |
| scaffold6207 |
119010 |
119134 |
- |
PL446 |
Unspecified |
| scaffold6207 |
121646 |
122457 |
+ |
RS238 |
Unspecified |