scaffold6288 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold6288 |
22 |
74 |
+ |
(TTTTA)n |
Simple_repeat |
| scaffold6288 |
96 |
710 |
- |
HELMET3 |
RC/Helitron |
| scaffold6288 |
795 |
2516 |
- |
HELMET3 |
RC/Helitron |
| scaffold6288 |
2658 |
2972 |
- |
Helitron2 |
RC/Helitron |
| scaffold6288 |
3169 |
3398 |
- |
Helitron-3_Mad |
RC/Helitron |
| scaffold6288 |
6085 |
6103 |
+ |
(A)n |
Simple_repeat |
| scaffold6288 |
6528 |
6687 |
+ |
RS7868 |
Unspecified |
| scaffold6288 |
7865 |
7906 |
+ |
(TTAT)n |
Simple_repeat |
| scaffold6288 |
8521 |
8544 |
+ |
(AAT)n |
Simple_repeat |
| scaffold6288 |
8693 |
8801 |
+ |
(ATA)n |
Simple_repeat |
| scaffold6288 |
8901 |
9650 |
- |
RS438 |
Unspecified |
| scaffold6288 |
9650 |
9964 |
- |
RS11589 |
Unspecified |
| scaffold6288 |
10076 |
10186 |
+ |
RS16614 |
Unspecified |
| scaffold6288 |
10282 |
10300 |
+ |
(T)n |
Simple_repeat |
| scaffold6288 |
10838 |
10867 |
+ |
(TTATGT)n |
Simple_repeat |
| scaffold6288 |
11911 |
11958 |
+ |
A-rich |
Low_complexity |
| scaffold6288 |
12069 |
12122 |
+ |
(AATGTT)n |
Simple_repeat |
| scaffold6288 |
13737 |
13779 |
+ |
(TTTATT)n |
Simple_repeat |
| scaffold6288 |
13776 |
14139 |
- |
PL139 |
Unspecified |
| scaffold6288 |
15729 |
15885 |
+ |
Gypsy-72-LTR_ZM |
LTR/Gypsy |
| scaffold6288 |
16815 |
16857 |
+ |
(ATAAC)n |
Simple_repeat |
| scaffold6288 |
17005 |
17083 |
+ |
(ACATAA)n |
Simple_repeat |
| scaffold6288 |
19867 |
20247 |
+ |
Copia-65_Mad-I |
LTR/Copia |
| scaffold6288 |
20191 |
20264 |
+ |
A-rich |
Low_complexity |
| scaffold6288 |
20290 |
20406 |
+ |
RS305 |
Unspecified |
| scaffold6288 |
20406 |
20822 |
+ |
RS305 |
Unspecified |
| scaffold6288 |
20912 |
21061 |
- |
RS176 |
Unspecified |
| scaffold6288 |
21517 |
21622 |
+ |
(TTA)n |
Simple_repeat |
| scaffold6288 |
27099 |
27130 |
+ |
(T)n |
Simple_repeat |
| scaffold6288 |
27574 |
27603 |
+ |
(T)n |
Simple_repeat |
| scaffold6288 |
29161 |
29177 |
+ |
(T)n |
Simple_repeat |
| scaffold6288 |
29694 |
29769 |
+ |
GA-rich |
Low_complexity |
| scaffold6288 |
31739 |
31961 |
+ |
RS4896 |
Unspecified |
| scaffold6288 |
32100 |
32132 |
+ |
(T)n |
Simple_repeat |
| scaffold6288 |
34300 |
34335 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold6288 |
34392 |
35029 |
+ |
Copia26-VV_I-int |
LTR/Copia |
| scaffold6288 |
35127 |
35326 |
+ |
Copia26-VV_I-int |
LTR/Copia |
| scaffold6288 |
36513 |
36626 |
+ |
ATGP5A_I-int |
LTR/Gypsy |
| scaffold6288 |
36526 |
36750 |
+ |
Copia-3_SL-I |
LTR/Copia |
| scaffold6288 |
37238 |
37263 |
+ |
(T)n |
Simple_repeat |
| scaffold6288 |
37292 |
37315 |
+ |
(T)n |
Simple_repeat |
| scaffold6288 |
37549 |
37685 |
- |
RS486 |
Unspecified |
| scaffold6288 |
37690 |
38565 |
- |
RS1338 |
Unspecified |
| scaffold6288 |
38647 |
38676 |
+ |
(ACCCGA)n |
Simple_repeat |
| scaffold6288 |
39528 |
39696 |
- |
PL712 |
Unspecified |
| scaffold6288 |
39696 |
40154 |
+ |
RS688 |
Unspecified |
| scaffold6288 |
41501 |
42170 |
+ |
MEGY-I_MT |
LTR/Gypsy |
| scaffold6288 |
42362 |
45345 |
+ |
MEGY-I_MT |
LTR/Gypsy |
| scaffold6288 |
45370 |
45432 |
+ |
(ATTTTC)n |
Simple_repeat |
| scaffold6288 |
45872 |
45923 |
+ |
(AGCCTAAACC)n |
Simple_repeat |
| scaffold6288 |
46430 |
46476 |
- |
DNA9-19_Mad |
DNA/MULE-MuDR |
| scaffold6288 |
46898 |
47119 |
- |
PL706 |
Unspecified |
| scaffold6288 |
47603 |
47751 |
+ |
COPI1_LTR |
LTR/Copia |
| scaffold6288 |
50539 |
50783 |
+ |
Gypsy-10_SB-I |
LTR/Gypsy |
| scaffold6288 |
52660 |
53247 |
+ |
gypsy |
gypsy(TransposonPSI) |
| scaffold6288 |
53851 |
54594 |
+ |
Gypsy3-VV_I-int |
LTR/Gypsy |
| scaffold6288 |
54852 |
54974 |
+ |
Gypsy3-VV_I-int |
LTR/Gypsy |
| scaffold6288 |
55435 |
55465 |
+ |
(TTGTA)n |
Simple_repeat |
| scaffold6288 |
57931 |
57991 |
+ |
A-rich |
Low_complexity |
| scaffold6288 |
59017 |
59339 |
- |
RS623 |
Unspecified |
| scaffold6288 |
59437 |
59456 |
+ |
(GAT)n |
Simple_repeat |
| scaffold6288 |
60266 |
60348 |
+ |
(GTTTT)n |
Simple_repeat |
| scaffold6288 |
60627 |
60633 |
+ |
(TTATTTT)n |
Simple_repeat |
| scaffold6288 |
60634 |
60678 |
+ |
(T)n |
Simple_repeat |
| scaffold6288 |
60679 |
60689 |
+ |
(TTATTTT)n |
Simple_repeat |
| scaffold6288 |
64568 |
64594 |
+ |
(TTAC)n |
Simple_repeat |
| scaffold6288 |
72093 |
72136 |
+ |
A-rich |
Low_complexity |
| scaffold6288 |
76449 |
76494 |
+ |
(A)n |
Simple_repeat |
| scaffold6288 |
76675 |
76713 |
+ |
(A)n |
Simple_repeat |
| scaffold6288 |
77077 |
77149 |
+ |
tRNASAT-1_ZM |
Satellite |
| scaffold6288 |
77150 |
77176 |
+ |
(T)n |
Simple_repeat |
| scaffold6288 |
78042 |
78079 |
+ |
(GCCG)n |
Simple_repeat |
| scaffold6288 |
78185 |
78250 |
+ |
(TTTTAG)n |
Simple_repeat |
| scaffold6288 |
79233 |
79302 |
+ |
(CT)n |
Simple_repeat |
| scaffold6288 |
79367 |
79581 |
+ |
RS2474 |
Unspecified |
| scaffold6288 |
79447 |
80199 |
- |
RS140 |
Unspecified |
| scaffold6288 |
80404 |
80508 |
+ |
(TTCAATT)n |
Simple_repeat |
| scaffold6288 |
80999 |
81032 |
+ |
(AAT)n |
Simple_repeat |
| scaffold6288 |
81235 |
81257 |
+ |
(T)n |
Simple_repeat |
| scaffold6288 |
81407 |
81710 |
+ |
RS524 |
Unspecified |
| scaffold6288 |
81750 |
82201 |
+ |
RS524 |
Unspecified |
| scaffold6288 |
82307 |
82349 |
- |
RS526 |
Unspecified |
| scaffold6288 |
82476 |
82810 |
- |
RS695 |
Unspecified |
| scaffold6288 |
82809 |
82840 |
+ |
(T)n |
Simple_repeat |
| scaffold6288 |
83035 |
83254 |
+ |
PL138 |
Unspecified |
| scaffold6288 |
83947 |
83998 |
+ |
A-rich |
Low_complexity |
| scaffold6288 |
84658 |
85563 |
- |
Copia25-PTR_I-int |
LTR/Copia |
| scaffold6288 |
85240 |
85563 |
- |
Copia25-PTR_I-int |
LTR/Copia |
| scaffold6288 |
85576 |
88512 |
- |
RIRE1_I-int |
LTR/Copia |
| scaffold6288 |
89451 |
89855 |
+ |
RS869 |
Unspecified |
| scaffold6288 |
91833 |
91877 |
+ |
(GTGTTTG)n |
Simple_repeat |
| scaffold6288 |
91931 |
92311 |
- |
RS655 |
Unspecified |
| scaffold6288 |
92369 |
92422 |
+ |
(TTTTCGT)n |
Simple_repeat |
| scaffold6288 |
94770 |
94815 |
+ |
(TTGTGC)n |
Simple_repeat |
| scaffold6288 |
95418 |
95457 |
+ |
(TTGTTTT)n |
Simple_repeat |
| scaffold6288 |
95829 |
95840 |
+ |
(TGTTTTT)n |
Simple_repeat |
| scaffold6288 |
95841 |
95891 |
+ |
(TTTTG)n |
Simple_repeat |
| scaffold6288 |
95892 |
95903 |
+ |
(TGTTTTT)n |
Simple_repeat |
| scaffold6288 |
96048 |
96422 |
- |
RS1060 |
Unspecified |
| scaffold6288 |
96237 |
96484 |
+ |
RS12409 |
Unspecified |
| scaffold6288 |
96622 |
96857 |
- |
RS192 |
Unspecified |
| scaffold6288 |
96704 |
96901 |
- |
RS2210 |
Unspecified |
| scaffold6288 |
99748 |
100230 |
- |
PIGY-I_PS |
LTR/Gypsy |
| scaffold6288 |
100346 |
100866 |
+ |
RS1930 |
Unspecified |
| scaffold6288 |
100436 |
101058 |
+ |
RS661 |
Unspecified |
| scaffold6288 |
100529 |
101153 |
+ |
RS1207 |
Unspecified |