scaffold6293 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold6293 |
84 |
1739 |
- |
Copia-71_VV-I |
LTR/Copia |
| scaffold6293 |
2094 |
3350 |
- |
Copia-71_VV-I |
LTR/Copia |
| scaffold6293 |
3433 |
4230 |
- |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold6293 |
3922 |
4087 |
- |
Copia-71_VV-I |
LTR/Copia |
| scaffold6293 |
6013 |
6370 |
+ |
RS12264 |
Unspecified |
| scaffold6293 |
6597 |
6639 |
+ |
(ATATA)n |
Simple_repeat |
| scaffold6293 |
6663 |
7197 |
- |
RS7284 |
Unspecified |
| scaffold6293 |
7214 |
7344 |
- |
RS542 |
Unspecified |
| scaffold6293 |
7493 |
7533 |
+ |
(AATAA)n |
Simple_repeat |
| scaffold6293 |
7590 |
7840 |
- |
RS5271 |
Unspecified |
| scaffold6293 |
7786 |
7870 |
- |
RS1155 |
Unspecified |
| scaffold6293 |
7821 |
7954 |
- |
RS1155 |
Unspecified |
| scaffold6293 |
7848 |
7956 |
- |
RS997 |
Unspecified |
| scaffold6293 |
7879 |
7977 |
- |
RS1155 |
Unspecified |
| scaffold6293 |
7977 |
8369 |
+ |
PL177 |
Unspecified |
| scaffold6293 |
8504 |
8628 |
- |
RS14028 |
Unspecified |
| scaffold6293 |
8868 |
9712 |
- |
RS7284 |
Unspecified |
| scaffold6293 |
9868 |
9987 |
- |
RS6514 |
Unspecified |
| scaffold6293 |
10029 |
10327 |
- |
RS13446 |
Unspecified |
| scaffold6293 |
11047 |
11089 |
+ |
(AACTAC)n |
Simple_repeat |
| scaffold6293 |
11132 |
11472 |
- |
RS11059 |
Unspecified |
| scaffold6293 |
12093 |
12127 |
+ |
(GAGCAC)n |
Simple_repeat |
| scaffold6293 |
12783 |
12812 |
+ |
(TAAGA)n |
Simple_repeat |
| scaffold6293 |
15805 |
15970 |
+ |
RS9008 |
Unspecified |
| scaffold6293 |
16225 |
16249 |
+ |
(T)n |
Simple_repeat |
| scaffold6293 |
16502 |
16528 |
+ |
(T)n |
Simple_repeat |
| scaffold6293 |
16662 |
16926 |
- |
RS1364 |
Unspecified |
| scaffold6293 |
16930 |
17067 |
+ |
PL503 |
Unspecified |
| scaffold6293 |
17132 |
17682 |
+ |
RS23 |
Unspecified |
| scaffold6293 |
17217 |
20003 |
+ |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold6293 |
17523 |
18621 |
+ |
Copia-93_VV-I |
LTR/Copia |
| scaffold6293 |
18748 |
18798 |
+ |
(CTGCCC)n |
Simple_repeat |
| scaffold6293 |
18975 |
19999 |
+ |
Copia-93_VV-I |
LTR/Copia |
| scaffold6293 |
20019 |
21069 |
+ |
Copia-32-I_VV |
LTR/Copia |
| scaffold6293 |
21200 |
21696 |
+ |
PL503 |
Unspecified |
| scaffold6293 |
21809 |
22096 |
+ |
RS9173 |
Unspecified |
| scaffold6293 |
22102 |
22139 |
+ |
(TTATAAT)n |
Simple_repeat |
| scaffold6293 |
22270 |
22330 |
- |
RS9173 |
Unspecified |
| scaffold6293 |
22634 |
22673 |
+ |
(A)n |
Simple_repeat |
| scaffold6293 |
22727 |
22775 |
+ |
RS1718 |
Unspecified |
| scaffold6293 |
22901 |
22965 |
+ |
(AAT)n |
Simple_repeat |
| scaffold6293 |
23124 |
23206 |
+ |
A-rich |
Low_complexity |
| scaffold6293 |
23150 |
23190 |
+ |
GA-rich |
Low_complexity |
| scaffold6293 |
23222 |
23262 |
+ |
(GAGAG)n |
Simple_repeat |
| scaffold6293 |
23837 |
23989 |
- |
RS3202 |
Unspecified |
| scaffold6293 |
24534 |
24598 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold6293 |
24628 |
24719 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold6293 |
25915 |
26036 |
- |
RS170 |
Unspecified |
| scaffold6293 |
26037 |
26077 |
+ |
(TAT)n |
Simple_repeat |
| scaffold6293 |
26262 |
26375 |
+ |
RS80 |
Unspecified |
| scaffold6293 |
26473 |
26539 |
+ |
(CTTCATT)n |
Simple_repeat |
| scaffold6293 |
26645 |
26798 |
- |
RS3215 |
Unspecified |
| scaffold6293 |
26799 |
27123 |
- |
RS623 |
Unspecified |
| scaffold6293 |
27219 |
27238 |
+ |
(GAT)n |
Simple_repeat |
| scaffold6293 |
28048 |
28130 |
+ |
(GTTTT)n |
Simple_repeat |
| scaffold6293 |
28409 |
28415 |
+ |
(TTATTTT)n |
Simple_repeat |
| scaffold6293 |
28416 |
28460 |
+ |
(T)n |
Simple_repeat |
| scaffold6293 |
28461 |
28471 |
+ |
(TTATTTT)n |
Simple_repeat |
| scaffold6293 |
32350 |
32376 |
+ |
(TTAC)n |
Simple_repeat |
| scaffold6293 |
33679 |
33778 |
+ |
RS17848 |
Unspecified |
| scaffold6293 |
39875 |
39918 |
+ |
A-rich |
Low_complexity |
| scaffold6293 |
44225 |
44258 |
+ |
(A)n |
Simple_repeat |
| scaffold6293 |
44622 |
44694 |
+ |
tRNASAT-1_ZM |
Satellite |
| scaffold6293 |
44695 |
44722 |
+ |
(T)n |
Simple_repeat |
| scaffold6293 |
45048 |
45143 |
- |
hAT-14N1_ZM |
DNA/hAT-Tip100 |
| scaffold6293 |
45588 |
45625 |
+ |
(GCCG)n |
Simple_repeat |
| scaffold6293 |
46113 |
46867 |
+ |
RS306 |
Unspecified |
| scaffold6293 |
46995 |
47133 |
+ |
EnSpm-5_Mad |
DNA/CMC-EnSpm |
| scaffold6293 |
47142 |
47230 |
+ |
EnSpm-5_Mad |
DNA/CMC-EnSpm |
| scaffold6293 |
47231 |
47924 |
- |
RS140 |
Unspecified |
| scaffold6293 |
47925 |
48048 |
- |
RS42 |
Unspecified |
| scaffold6293 |
48530 |
48764 |
- |
RS42 |
Unspecified |
| scaffold6293 |
48653 |
48789 |
+ |
RS42 |
Unspecified |
| scaffold6293 |
50476 |
50512 |
+ |
(GTCGGTG)n |
Simple_repeat |
| scaffold6293 |
51082 |
51126 |
+ |
(TTTAAT)n |
Simple_repeat |
| scaffold6293 |
51172 |
51274 |
+ |
RS526 |
Unspecified |
| scaffold6293 |
51538 |
51604 |
+ |
(TTA)n |
Simple_repeat |
| scaffold6293 |
52571 |
52643 |
- |
DNA-TA-1_STu |
DNA/TcMar-Stowaway |
| scaffold6293 |
53173 |
53315 |
+ |
PL87 |
Unspecified |
| scaffold6293 |
53750 |
53773 |
+ |
(A)n |
Simple_repeat |
| scaffold6293 |
54280 |
55355 |
- |
RS828 |
Unspecified |
| scaffold6293 |
57673 |
57712 |
+ |
(TTCAAT)n |
Simple_repeat |
| scaffold6293 |
59972 |
60047 |
+ |
(TGG)n |
Simple_repeat |
| scaffold6293 |
60144 |
60197 |
+ |
G-rich |
Low_complexity |
| scaffold6293 |
60625 |
60669 |
+ |
A-rich |
Low_complexity |
| scaffold6293 |
61623 |
61672 |
- |
Gypsy-9_EPa-I |
LTR/Gypsy |
| scaffold6293 |
62233 |
62862 |
- |
Gypsy-9_EPa-I |
LTR/Gypsy |
| scaffold6293 |
63357 |
63506 |
- |
Gypsy-72_GM-I |
LTR/Gypsy |
| scaffold6293 |
63873 |
63926 |
+ |
SHACOP14_I_MT-int |
LTR/Copia |
| scaffold6293 |
65308 |
65345 |
+ |
(AATACT)n |
Simple_repeat |
| scaffold6293 |
65598 |
65632 |
+ |
(TAATT)n |
Simple_repeat |
| scaffold6293 |
65744 |
65776 |
+ |
(TCTT)n |
Simple_repeat |
| scaffold6293 |
65846 |
66111 |
- |
RS82 |
Unspecified |
| scaffold6293 |
66103 |
66223 |
+ |
RS69 |
Unspecified |
| scaffold6293 |
66350 |
66403 |
+ |
(ATA)n |
Simple_repeat |
| scaffold6293 |
66402 |
66488 |
+ |
(TATGTT)n |
Simple_repeat |
| scaffold6293 |
66798 |
66857 |
+ |
(TTTGTT)n |
Simple_repeat |
| scaffold6293 |
67004 |
67060 |
+ |
A-rich |
Low_complexity |
| scaffold6293 |
67446 |
68034 |
- |
PL951 |
Unspecified |
| scaffold6293 |
67458 |
67920 |
- |
PL49 |
Unspecified |
| scaffold6293 |
68110 |
68151 |
+ |
A-rich |
Low_complexity |
| scaffold6293 |
68764 |
69489 |
+ |
RS608 |
Unspecified |
| scaffold6293 |
69399 |
69670 |
+ |
RS62 |
Unspecified |
| scaffold6293 |
69404 |
69636 |
+ |
RS62 |
Unspecified |
| scaffold6293 |
69482 |
69716 |
- |
RS2931 |
Unspecified |
| scaffold6293 |
69685 |
69929 |
+ |
RS8819 |
Unspecified |