scaffold6496 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold6496 |
1 |
648 |
+ |
PL568 |
Unspecified |
| scaffold6496 |
895 |
944 |
+ |
(TGTGAAT)n |
Simple_repeat |
| scaffold6496 |
1884 |
1982 |
+ |
(GCTGAT)n |
Simple_repeat |
| scaffold6496 |
3992 |
4071 |
- |
Gypsy-10_Pru-LTR |
LTR/Gypsy |
| scaffold6496 |
4847 |
4934 |
- |
Atlantys1_I-int |
LTR/Gypsy |
| scaffold6496 |
7067 |
8254 |
- |
RS730 |
Unspecified |
| scaffold6496 |
8276 |
8344 |
+ |
(TTTG)n |
Simple_repeat |
| scaffold6496 |
10000 |
10556 |
- |
RS21 |
Unspecified |
| scaffold6496 |
10107 |
11077 |
+ |
RS2700 |
Unspecified |
| scaffold6496 |
10339 |
12142 |
- |
RS51 |
Unspecified |
| scaffold6496 |
11254 |
12966 |
+ |
PL647 |
Unspecified |
| scaffold6496 |
13543 |
13875 |
- |
RS1064 |
Unspecified |
| scaffold6496 |
13981 |
14300 |
+ |
(CAAGCA)n |
Simple_repeat |
| scaffold6496 |
14245 |
14300 |
+ |
(CAAGCA)n |
Simple_repeat |
| scaffold6496 |
14366 |
16312 |
+ |
Gypsy-72-LTR_ZM |
LTR/Gypsy |
| scaffold6496 |
16135 |
16312 |
+ |
Gypsy-72-LTR_ZM |
LTR/Gypsy |
| scaffold6496 |
17156 |
17197 |
+ |
(AACAAC)n |
Simple_repeat |
| scaffold6496 |
17264 |
17306 |
+ |
(ATAAC)n |
Simple_repeat |
| scaffold6496 |
17316 |
17347 |
+ |
A-rich |
Low_complexity |
| scaffold6496 |
17442 |
17506 |
+ |
A-rich |
Low_complexity |
| scaffold6496 |
17620 |
17767 |
- |
RS10254 |
Unspecified |
| scaffold6496 |
18005 |
18033 |
+ |
(TCGAA)n |
Simple_repeat |
| scaffold6496 |
18513 |
18713 |
- |
RS7209 |
Unspecified |
| scaffold6496 |
18764 |
18937 |
- |
RS14681 |
Unspecified |
| scaffold6496 |
19016 |
19231 |
- |
RS9556 |
Unspecified |
| scaffold6496 |
19467 |
19646 |
- |
RS11242 |
Unspecified |
| scaffold6496 |
22716 |
22755 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold6496 |
22974 |
23033 |
- |
Gypsy-89_SB-I |
LTR/Gypsy |
| scaffold6496 |
23569 |
23727 |
+ |
RS17762 |
Unspecified |
| scaffold6496 |
24777 |
24802 |
+ |
(TAT)n |
Simple_repeat |
| scaffold6496 |
25240 |
25281 |
+ |
(ATTAA)n |
Simple_repeat |
| scaffold6496 |
25663 |
25705 |
+ |
A-rich |
Low_complexity |
| scaffold6496 |
25821 |
25857 |
+ |
A-rich |
Low_complexity |
| scaffold6496 |
26475 |
27015 |
+ |
RS4736 |
Unspecified |
| scaffold6496 |
27148 |
27201 |
+ |
(GT)n |
Simple_repeat |
| scaffold6496 |
27211 |
27299 |
+ |
(TG)n |
Simple_repeat |
| scaffold6496 |
27521 |
27636 |
+ |
RS2931 |
Unspecified |
| scaffold6496 |
28615 |
28653 |
+ |
(GATGA)n |
Simple_repeat |
| scaffold6496 |
29040 |
29078 |
+ |
(TGTTGCT)n |
Simple_repeat |
| scaffold6496 |
29683 |
30192 |
+ |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold6496 |
30358 |
30779 |
- |
RS6463 |
Unspecified |
| scaffold6496 |
30369 |
31469 |
- |
RS2140 |
Unspecified |
| scaffold6496 |
30824 |
31436 |
- |
RS2603 |
Unspecified |
| scaffold6496 |
31511 |
31559 |
+ |
(TCTTCA)n |
Simple_repeat |
| scaffold6496 |
31563 |
31594 |
+ |
(ATTTT)n |
Simple_repeat |
| scaffold6496 |
32263 |
32297 |
+ |
RS976 |
Unspecified |
| scaffold6496 |
32320 |
32338 |
+ |
(T)n |
Simple_repeat |
| scaffold6496 |
32965 |
33100 |
+ |
(GAACAA)n |
Simple_repeat |
| scaffold6496 |
33955 |
34012 |
+ |
(GTT)n |
Simple_repeat |
| scaffold6496 |
34074 |
34096 |
+ |
(AGA)n |
Simple_repeat |
| scaffold6496 |
34223 |
34258 |
+ |
(TGGAGG)n |
Simple_repeat |
| scaffold6496 |
34320 |
34344 |
+ |
(A)n |
Simple_repeat |
| scaffold6496 |
34488 |
34604 |
+ |
(TATAAG)n |
Simple_repeat |
| scaffold6496 |
34920 |
35677 |
- |
RS2699 |
Unspecified |
| scaffold6496 |
35162 |
36270 |
- |
RS646 |
Unspecified |
| scaffold6496 |
37309 |
37552 |
+ |
RS1394 |
Unspecified |
| scaffold6496 |
37679 |
37711 |
+ |
(ACTTA)n |
Simple_repeat |
| scaffold6496 |
38797 |
39171 |
+ |
RS3585 |
Unspecified |
| scaffold6496 |
39168 |
39207 |
+ |
PL79 |
Unspecified |
| scaffold6496 |
39531 |
39821 |
+ |
ATGP5A_I-int |
LTR/Gypsy |
| scaffold6496 |
40194 |
40817 |
+ |
ATGP5A_I-int |
LTR/Gypsy |
| scaffold6496 |
42485 |
42517 |
+ |
(GTA)n |
Simple_repeat |
| scaffold6496 |
42526 |
42571 |
+ |
(TGTATAT)n |
Simple_repeat |
| scaffold6496 |
42566 |
42629 |
+ |
A-rich |
Low_complexity |
| scaffold6496 |
42703 |
43111 |
+ |
RS1834 |
Unspecified |
| scaffold6496 |
43145 |
43477 |
+ |
RS1034 |
Unspecified |
| scaffold6496 |
44316 |
44352 |
+ |
(A)n |
Simple_repeat |
| scaffold6496 |
45076 |
45143 |
+ |
(TTTTC)n |
Simple_repeat |
| scaffold6496 |
45290 |
45836 |
+ |
(ACCAACA)n |
Simple_repeat |
| scaffold6496 |
45764 |
45836 |
+ |
(ACCAACA)n |
Simple_repeat |
| scaffold6496 |
46106 |
47124 |
- |
RS3063 |
Unspecified |
| scaffold6496 |
46541 |
47319 |
- |
PL921 |
Unspecified |
| scaffold6496 |
47308 |
47433 |
+ |
PL182 |
Unspecified |
| scaffold6496 |
47434 |
47979 |
- |
PL219 |
Unspecified |
| scaffold6496 |
48661 |
48750 |
- |
ATHILA6C_I-int |
LTR/Gypsy |
| scaffold6496 |
48978 |
49015 |
+ |
(T)n |
Simple_repeat |
| scaffold6496 |
49567 |
49616 |
- |
Gypsy-10_Mad-I |
LTR/Gypsy |
| scaffold6496 |
50486 |
51010 |
- |
MEGY-I_MT |
LTR/Gypsy |
| scaffold6496 |
51180 |
51654 |
+ |
PL945 |
Unspecified |
| scaffold6496 |
51842 |
52074 |
- |
MEGY-I_MT |
LTR/Gypsy |
| scaffold6496 |
52748 |
52783 |
- |
MEGY-I_MT |
LTR/Gypsy |
| scaffold6496 |
53366 |
53472 |
+ |
(ATA)n |
Simple_repeat |
| scaffold6496 |
53366 |
53417 |
+ |
(ATA)n |
Simple_repeat |
| scaffold6496 |
53396 |
53472 |
- |
RS1210 |
Unspecified |
| scaffold6496 |
53644 |
54775 |
- |
PL554 |
Unspecified |
| scaffold6496 |
55215 |
55274 |
- |
Gypsy-LTR_MT |
LTR/Gypsy |
| scaffold6496 |
55410 |
56444 |
- |
GYPSY3-I_MT |
LTR/Gypsy |
| scaffold6496 |
56737 |
58687 |
- |
GYPSY3-I_MT |
LTR/Gypsy |
| scaffold6496 |
58760 |
58778 |
+ |
(TGTTTTT)n |
Simple_repeat |
| scaffold6496 |
58779 |
58828 |
+ |
(TTTG)n |
Simple_repeat |
| scaffold6496 |
59020 |
59884 |
+ |
RS3631 |
Unspecified |
| scaffold6496 |
60698 |
60941 |
+ |
PL956 |
Unspecified |