genome | start | end | strand | repeat-name | repeat-class |
---|---|---|---|---|---|
scaffold6536 | 1 | 606 | - | helitronORF | helitronORF(TransposonPSI) |
scaffold6536 | 2 | 458 | - | Helitron1 | RC/Helitron |
scaffold6536 | 611 | 1065 | - | RS8194 | Unspecified |
scaffold6536 | 1064 | 1323 | - | LTR2-ZM_LTR | LTR |
scaffold6536 | 1576 | 1814 | - | LTR-1_SBi-LTR | LTR |
scaffold6536 | 2075 | 2385 | - | RS123 | Unspecified |
scaffold6536 | 2789 | 3009 | - | HELMET4 | RC/Helitron |
scaffold6536 | 3651 | 3676 | + | (A)n | Simple_repeat |
scaffold6536 | 3876 | 3928 | + | (ACTTGT)n | Simple_repeat |
scaffold6536 | 5066 | 5104 | + | A-rich | Low_complexity |
scaffold6536 | 5149 | 5178 | + | A-rich | Low_complexity |
scaffold6536 | 5384 | 5418 | + | (AATAA)n | Simple_repeat |
scaffold6536 | 5548 | 5594 | + | (A)n | Simple_repeat |
scaffold6536 | 5698 | 5870 | + | RS10554 | Unspecified |
scaffold6536 | 5783 | 5957 | + | RS10554 | Unspecified |
scaffold6536 | 5803 | 6465 | - | RS995 | Unspecified |
scaffold6536 | 6291 | 6594 | + | RS5235 | Unspecified |
scaffold6536 | 6778 | 6808 | + | GA-rich | Low_complexity |
scaffold6536 | 7374 | 7580 | - | PL256 | Unspecified |
scaffold6536 | 8091 | 8270 | + | (TCGGG)n | Simple_repeat |
scaffold6536 | 8737 | 8811 | + | (TTTA)n | Simple_repeat |
scaffold6536 | 8894 | 9082 | + | (TCGGG)n | Simple_repeat |
scaffold6536 | 10237 | 10253 | + | (A)n | Simple_repeat |
scaffold6536 | 12332 | 12356 | + | (ACCAA)n | Simple_repeat |
scaffold6536 | 13209 | 13299 | + | LTR-7_Mad-LTR | LTR |
scaffold6536 | 14161 | 14198 | + | (ATTTCAA)n | Simple_repeat |
scaffold6536 | 16291 | 16313 | + | (T)n | Simple_repeat |
scaffold6536 | 19567 | 19612 | + | A-rich | Low_complexity |
scaffold6536 | 19710 | 19974 | - | RS106 | Unspecified |
scaffold6536 | 22304 | 22343 | + | (A)n | Simple_repeat |
scaffold6536 | 22610 | 22819 | + | (AGTTC)n | Simple_repeat |
scaffold6536 | 23021 | 23190 | + | Copia-3_PTri-I | LTR/Copia |
scaffold6536 | 23231 | 23495 | - | RS356 | Unspecified |
scaffold6536 | 23404 | 23513 | + | RS11449 | Unspecified |
scaffold6536 | 24606 | 24694 | + | (ATA)n | Simple_repeat |
scaffold6536 | 24696 | 24735 | + | (AAT)n | Simple_repeat |
scaffold6536 | 24736 | 24871 | + | (TAT)n | Simple_repeat |
scaffold6536 | 24872 | 24890 | + | (AAT)n | Simple_repeat |
scaffold6536 | 24898 | 25048 | + | (TAA)n | Simple_repeat |
scaffold6536 | 25290 | 25441 | - | RS1261 | Unspecified |
scaffold6536 | 26134 | 26217 | + | LTR-7_Mad-LTR | LTR |
scaffold6536 | 26766 | 26908 | - | RS539 | Unspecified |
scaffold6536 | 26917 | 27186 | - | RS10 | Unspecified |
scaffold6536 | 27186 | 27323 | + | RS221 | Unspecified |
scaffold6536 | 27203 | 27224 | + | (A)n | Simple_repeat |
scaffold6536 | 27456 | 27533 | + | (ACATATA)n | Simple_repeat |
scaffold6536 | 28394 | 28940 | + | RS265 | Unspecified |
scaffold6536 | 28944 | 29743 | + | Gypsy18-PTR_I-int | LTR/Gypsy |
scaffold6536 | 29836 | 31191 | + | Gypsy18-PTR_I-int | LTR/Gypsy |
scaffold6536 | 31139 | 31202 | + | Alfare1_I-int | LTR/Copia? |
scaffold6536 | 31141 | 31264 | + | RAM13_I_MT-int | LTR |
scaffold6536 | 33785 | 33852 | + | Athila_I-int | LTR/Gypsy |
scaffold6536 | 33928 | 34011 | + | Gypsy-133_GM-I | LTR/Gypsy |
scaffold6536 | 34578 | 34709 | - | TPN1_IN | DNA/CMC-EnSpm |
scaffold6536 | 37452 | 37524 | - | PL255 | Unspecified |
scaffold6536 | 37867 | 37933 | + | Athila_I-int | LTR/Gypsy |
scaffold6536 | 38624 | 38722 | + | RS828 | Unspecified |
scaffold6536 | 39359 | 39386 | + | (TAG)n | Simple_repeat |
scaffold6536 | 40111 | 40177 | - | RLG_scDEL_1_5-I | LTR/Gypsy |
scaffold6536 | 40216 | 40297 | + | (ATA)n | Simple_repeat |
scaffold6536 | 40902 | 40969 | + | (AAGTC)n | Simple_repeat |
scaffold6536 | 42209 | 42498 | + | Gypsy-5_PD-I | LTR/Gypsy |
scaffold6536 | 42873 | 42936 | + | ATGP5I | LTR/Gypsy |
scaffold6536 | 43125 | 43496 | + | Gypsy-4_CP-I | LTR/Gypsy |
scaffold6536 | 43559 | 43718 | - | RS9631 | Unspecified |
scaffold6536 | 44007 | 44056 | + | Gypsy-4_CP-I | LTR/Gypsy |
scaffold6536 | 44165 | 44232 | + | (AAGTC)n | Simple_repeat |
scaffold6536 | 45590 | 45618 | + | (T)n | Simple_repeat |
scaffold6536 | 45641 | 45720 | + | G-rich | Low_complexity |
scaffold6536 | 45721 | 45755 | + | (GTG)n | Simple_repeat |
scaffold6536 | 45771 | 45796 | + | (GTTT)n | Simple_repeat |
scaffold6536 | 46244 | 46281 | + | GA-rich | Low_complexity |
scaffold6536 | 46299 | 46392 | + | RS14977 | Unspecified |
scaffold6536 | 46425 | 46694 | - | RS10 | Unspecified |
scaffold6536 | 46696 | 47139 | + | PL577 | Unspecified |
scaffold6536 | 47411 | 47958 | + | RS1230 | Unspecified |
scaffold6536 | 48018 | 48315 | + | RS873 | Unspecified |
scaffold6536 | 51622 | 51644 | + | (T)n | Simple_repeat |
scaffold6536 | 52011 | 52031 | + | (A)n | Simple_repeat |
scaffold6536 | 52858 | 52881 | + | (CACCAA)n | Simple_repeat |
scaffold6536 | 52882 | 52918 | + | (CAACAC)n | Simple_repeat |
scaffold6536 | 52919 | 52935 | + | (CACCAA)n | Simple_repeat |
scaffold6536 | 55089 | 55126 | + | (CTCGG)n | Simple_repeat |
scaffold6536 | 55134 | 55189 | + | (CGAGCC)n | Simple_repeat |
scaffold6536 | 56072 | 56105 | + | (AAATTT)n | Simple_repeat |
scaffold6536 | 56330 | 56400 | + | Copia-3_PTri-I | LTR/Copia |
scaffold6536 | 56401 | 56554 | + | Copia-3_PTri-I | LTR/Copia |
scaffold6536 | 56570 | 56675 | + | Copia-3_PTri-I | LTR/Copia |
scaffold6536 | 56774 | 56838 | + | A-rich | Low_complexity |
scaffold6536 | 57009 | 57073 | + | A-rich | Low_complexity |
scaffold6536 | 57244 | 57308 | + | A-rich | Low_complexity |
scaffold6536 | 58494 | 58547 | + | (CATATAG)n | Simple_repeat |
scaffold6536 | 59218 | 59360 | - | RS4505 | Unspecified |
scaffold6536 | 60107 | 60360 | - | RS356 | Unspecified |
scaffold6536 | 61331 | 61370 | + | (GGTTT)n | Simple_repeat |
scaffold6536 | 62630 | 62708 | + | (ATATA)n | Simple_repeat |
scaffold6536 | 63196 | 63234 | + | (TTTTAAT)n | Simple_repeat |
scaffold6536 | 64238 | 64267 | + | (TCATAT)n | Simple_repeat |
scaffold6536 | 64329 | 64480 | + | RS12580 | Unspecified |
scaffold6536 | 64625 | 64781 | + | RS5882 | Unspecified |
scaffold6536 | 64801 | 65006 | + | RS12788 | Unspecified |
scaffold6536 | 64987 | 65191 | + | A-rich | Low_complexity |
scaffold6536 | 65136 | 65191 | + | A-rich | Low_complexity |
scaffold6536 | 65363 | 65428 | + | (TTTGTA)n | Simple_repeat |
scaffold6536 | 67703 | 67766 | + | (ACGAA)n | Simple_repeat |
scaffold6536 | 68618 | 68692 | + | (TTCTTTT)n | Simple_repeat |
scaffold6536 | 69430 | 69485 | + | A-rich | Low_complexity |
scaffold6536 | 69727 | 69770 | + | (CAT)n | Simple_repeat |
scaffold6536 | 69911 | 70630 | - | PIGY-I_PS | LTR/Gypsy |
scaffold6536 | 70711 | 71241 | + | RS1930 | Unspecified |
scaffold6536 | 70770 | 71343 | + | RS1706 | Unspecified |
scaffold6536 | 70771 | 71274 | + | RS6060 | Unspecified |
scaffold6536 | 70776 | 71454 | + | RS661 | Unspecified |
scaffold6536 | 70902 | 71549 | + | RS1207 | Unspecified |
scaffold6536 | 72153 | 72443 | - | LTR-1_SBi-LTR | LTR |
scaffold6536 | 72889 | 73227 | + | RS101 | Unspecified |
scaffold6536 | 74151 | 74320 | + | RS1900 | Unspecified |
scaffold6536 | 76508 | 76976 | + | (T)n | Simple_repeat |
scaffold6536 | 76508 | 76535 | + | (T)n | Simple_repeat |
scaffold6536 | 76523 | 76976 | - | RS1018 | Unspecified |
scaffold6536 | 77051 | 77217 | + | GA-rich | Low_complexity |
scaffold6536 | 78420 | 78436 | + | (A)n | Simple_repeat |
scaffold6536 | 79030 | 79079 | + | G-rich | Low_complexity |
scaffold6536 | 80372 | 80395 | + | (A)n | Simple_repeat |
scaffold6536 | 80595 | 80648 | + | GA-rich | Low_complexity |
scaffold6536 | 80721 | 80765 | + | A-rich | Low_complexity |
scaffold6536 | 80973 | 81181 | + | RS6049 | Unspecified |
scaffold6536 | 81324 | 81369 | + | (GTTGTC)n | Simple_repeat |
scaffold6536 | 81742 | 81787 | + | (TGT)n | Simple_repeat |
scaffold6536 | 82948 | 83973 | - | LINE | LINE(TransposonPSI) |
scaffold6536 | 83206 | 83938 | - | L1-1_GM | LINE/L1 |
scaffold6536 | 84357 | 84532 | + | RS13475 | Unspecified |
scaffold6536 | 84575 | 86226 | - | Copia-71_VV-I | LTR/Copia |
scaffold6536 | 86489 | 87807 | - | Copia-71_VV-I | LTR/Copia |
scaffold6536 | 88075 | 88793 | - | Copia-71_VV-I | LTR/Copia |
scaffold6536 | 88853 | 89028 | + | RS13475 | Unspecified |
scaffold6536 | 89747 | 89976 | - | RS586 | Unspecified |
scaffold6536 | 89976 | 91293 | - | PL595 | Unspecified |
scaffold6536 | 91292 | 91342 | + | RS356 | Unspecified |
scaffold6536 | 92948 | 93084 | + | RS4851 | Unspecified |
scaffold6536 | 93085 | 93196 | + | RS2233 | Unspecified |
scaffold6536 | 93366 | 93673 | + | RS10630 | Unspecified |
scaffold6536 | 94099 | 94285 | + | RS14389 | Unspecified |
scaffold6536 | 94329 | 94556 | - | RS5384 | Unspecified |
scaffold6536 | 95547 | 95588 | + | (CAACGG)n | Simple_repeat |