scaffold6545 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold6545 |
2 |
33 |
+ |
(TAATT)n |
Simple_repeat |
| scaffold6545 |
101 |
415 |
+ |
RS691 |
Unspecified |
| scaffold6545 |
875 |
921 |
+ |
(TTAA)n |
Simple_repeat |
| scaffold6545 |
2313 |
2340 |
+ |
(ATTTT)n |
Simple_repeat |
| scaffold6545 |
3031 |
3758 |
- |
RS158 |
Unspecified |
| scaffold6545 |
3759 |
4157 |
- |
PL405 |
Unspecified |
| scaffold6545 |
5001 |
5702 |
+ |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold6545 |
5226 |
5711 |
+ |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold6545 |
5601 |
5660 |
+ |
Copia-81_GM-I |
LTR/Copia |
| scaffold6545 |
6195 |
6242 |
- |
Copia25-PTR_I-int |
LTR/Copia |
| scaffold6545 |
6240 |
7508 |
- |
RS288 |
Unspecified |
| scaffold6545 |
7508 |
7871 |
+ |
PL911 |
Unspecified |
| scaffold6545 |
8145 |
9612 |
- |
Copia-10_BD-I |
LTR/Copia |
| scaffold6545 |
11063 |
11776 |
- |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold6545 |
11072 |
11274 |
- |
Copia7-ZM_I-int |
LTR/Copia |
| scaffold6545 |
11369 |
11782 |
- |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold6545 |
12622 |
12654 |
+ |
GA-rich |
Low_complexity |
| scaffold6545 |
12749 |
12781 |
+ |
GA-rich |
Low_complexity |
| scaffold6545 |
13365 |
13403 |
+ |
A-rich |
Low_complexity |
| scaffold6545 |
14135 |
14152 |
+ |
(T)n |
Simple_repeat |
| scaffold6545 |
14178 |
14224 |
+ |
A-rich |
Low_complexity |
| scaffold6545 |
14460 |
14512 |
+ |
A-rich |
Low_complexity |
| scaffold6545 |
14561 |
14775 |
+ |
RS446 |
Unspecified |
| scaffold6545 |
14995 |
15421 |
- |
RS425 |
Unspecified |
| scaffold6545 |
15421 |
15854 |
+ |
RS227 |
Unspecified |
| scaffold6545 |
18554 |
18741 |
+ |
RS110 |
Unspecified |
| scaffold6545 |
21474 |
21597 |
+ |
LTR-1_SBi-LTR |
LTR |
| scaffold6545 |
21668 |
21698 |
+ |
(TA)n |
Simple_repeat |
| scaffold6545 |
23761 |
23912 |
+ |
PIGY-LTR_PS |
LTR/Gypsy |
| scaffold6545 |
24241 |
24850 |
- |
RS661 |
Unspecified |
| scaffold6545 |
24352 |
24856 |
- |
RS1706 |
Unspecified |
| scaffold6545 |
24430 |
24914 |
- |
RS1930 |
Unspecified |
| scaffold6545 |
25018 |
25676 |
+ |
PIGY-I_PS |
LTR/Gypsy |
| scaffold6545 |
26122 |
26158 |
+ |
(TTTTCA)n |
Simple_repeat |
| scaffold6545 |
27625 |
27641 |
+ |
(TA)n |
Simple_repeat |
| scaffold6545 |
29082 |
29115 |
+ |
(GTTGT)n |
Simple_repeat |
| scaffold6545 |
29851 |
30871 |
- |
Ogre-VP1_I-int |
LTR/Gypsy |
| scaffold6545 |
31159 |
32010 |
- |
gypsy |
gypsy(TransposonPSI) |
| scaffold6545 |
31250 |
31429 |
- |
Ogre-VP1_I-int |
LTR/Gypsy |
| scaffold6545 |
31595 |
31875 |
- |
Gypsy-53_GM-I |
LTR/Gypsy |
| scaffold6545 |
31944 |
31978 |
+ |
(AAATA)n |
Simple_repeat |
| scaffold6545 |
32123 |
32211 |
+ |
A-rich |
Low_complexity |
| scaffold6545 |
32266 |
32332 |
+ |
A-rich |
Low_complexity |
| scaffold6545 |
33706 |
33750 |
+ |
(ACA)n |
Simple_repeat |
| scaffold6545 |
34144 |
34327 |
+ |
RS16527 |
Unspecified |
| scaffold6545 |
34368 |
34410 |
- |
GYPSODE1_LTR |
LTR/Gypsy |
| scaffold6545 |
34395 |
34440 |
+ |
CACTA-Q |
DNA/CMC-EnSpm |
| scaffold6545 |
34555 |
35565 |
- |
gypsy |
gypsy(TransposonPSI) |
| scaffold6545 |
34574 |
35563 |
- |
Gypsy-53_GM-I |
LTR/Gypsy |
| scaffold6545 |
36589 |
36660 |
- |
ATLANTYS_LC_I-int |
LTR/Gypsy |
| scaffold6545 |
38033 |
39682 |
+ |
gypsy |
gypsy(TransposonPSI) |
| scaffold6545 |
39898 |
40300 |
+ |
Atlantys2_I-int |
LTR/Gypsy |
| scaffold6545 |
40826 |
41165 |
+ |
Atlantys2_I-int |
LTR/Gypsy |
| scaffold6545 |
41226 |
41455 |
+ |
Atlantys2_I-int |
LTR/Gypsy |
| scaffold6545 |
41811 |
42909 |
+ |
Gypsy3-VV_I-int |
LTR/Gypsy |
| scaffold6545 |
43112 |
43145 |
+ |
(CAAAAA)n |
Simple_repeat |
| scaffold6545 |
43290 |
43339 |
+ |
(CATAA)n |
Simple_repeat |
| scaffold6545 |
45310 |
45596 |
+ |
RS15 |
Unspecified |
| scaffold6545 |
45597 |
45679 |
- |
PL741 |
Unspecified |
| scaffold6545 |
46263 |
46308 |
+ |
(GTAT)n |
Simple_repeat |
| scaffold6545 |
47811 |
47983 |
+ |
COPI2_LTR |
LTR/Copia |
| scaffold6545 |
49889 |
49921 |
+ |
(CGG)n |
Simple_repeat |
| scaffold6545 |
51351 |
51372 |
+ |
(A)n |
Simple_repeat |
| scaffold6545 |
52085 |
52729 |
- |
PL489 |
Unspecified |
| scaffold6545 |
53714 |
53774 |
+ |
A-rich |
Low_complexity |
| scaffold6545 |
54094 |
54136 |
+ |
(TTTCGTT)n |
Simple_repeat |
| scaffold6545 |
54185 |
54337 |
+ |
(TAA)n |
Simple_repeat |
| scaffold6545 |
54517 |
54594 |
+ |
(AAT)n |
Simple_repeat |
| scaffold6545 |
55022 |
55120 |
- |
PL591 |
Unspecified |
| scaffold6545 |
55118 |
55286 |
+ |
RS184 |
Unspecified |
| scaffold6545 |
55277 |
55854 |
+ |
RS23 |
Unspecified |
| scaffold6545 |
55282 |
55948 |
+ |
PL706 |
Unspecified |
| scaffold6545 |
55893 |
56443 |
- |
RS14234 |
Unspecified |
| scaffold6545 |
56253 |
57942 |
+ |
RS27 |
Unspecified |
| scaffold6545 |
57939 |
58240 |
- |
RS691 |
Unspecified |
| scaffold6545 |
58235 |
58573 |
+ |
RS2881 |
Unspecified |
| scaffold6545 |
58575 |
59388 |
+ |
RS27 |
Unspecified |
| scaffold6545 |
58666 |
59698 |
- |
RS2298 |
Unspecified |
| scaffold6545 |
59184 |
59808 |
+ |
RS249 |
Unspecified |
| scaffold6545 |
61307 |
62655 |
+ |
RS141 |
Unspecified |
| scaffold6545 |
62345 |
62783 |
+ |
PL898 |
Unspecified |
| scaffold6545 |
62623 |
62946 |
+ |
PL898 |
Unspecified |
| scaffold6545 |
71397 |
71487 |
+ |
RS79 |
Unspecified |