scaffold6554 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold6554 |
1 |
153 |
- |
RS6023 |
Unspecified |
| scaffold6554 |
399 |
446 |
+ |
(TGAATGA)n |
Simple_repeat |
| scaffold6554 |
660 |
893 |
- |
RS6023 |
Unspecified |
| scaffold6554 |
1211 |
1244 |
+ |
(AATACT)n |
Simple_repeat |
| scaffold6554 |
1425 |
1534 |
+ |
RS11704 |
Unspecified |
| scaffold6554 |
3806 |
3866 |
+ |
(TTG)n |
Simple_repeat |
| scaffold6554 |
4165 |
4240 |
+ |
(CTGAA)n |
Simple_repeat |
| scaffold6554 |
5805 |
5852 |
+ |
(TAA)n |
Simple_repeat |
| scaffold6554 |
6519 |
6563 |
+ |
(CCA)n |
Simple_repeat |
| scaffold6554 |
6622 |
6652 |
+ |
(CAT)n |
Simple_repeat |
| scaffold6554 |
6713 |
6746 |
+ |
(TGG)n |
Simple_repeat |
| scaffold6554 |
7085 |
7118 |
+ |
(TGG)n |
Simple_repeat |
| scaffold6554 |
7895 |
7939 |
+ |
(TATTATT)n |
Simple_repeat |
| scaffold6554 |
8041 |
8077 |
+ |
(GTTGTCT)n |
Simple_repeat |
| scaffold6554 |
8645 |
8752 |
+ |
(TGT)n |
Simple_repeat |
| scaffold6554 |
8833 |
8931 |
+ |
RS2923 |
Unspecified |
| scaffold6554 |
10317 |
10360 |
+ |
(T)n |
Simple_repeat |
| scaffold6554 |
10455 |
10526 |
+ |
(TTTAAT)n |
Simple_repeat |
| scaffold6554 |
10836 |
10987 |
- |
RS2406 |
Unspecified |
| scaffold6554 |
10985 |
11130 |
- |
RS3891 |
Unspecified |
| scaffold6554 |
11060 |
11251 |
- |
RS1321 |
Unspecified |
| scaffold6554 |
11334 |
11429 |
- |
RS3891 |
Unspecified |
| scaffold6554 |
11397 |
11437 |
- |
RS2406 |
Unspecified |
| scaffold6554 |
13632 |
13871 |
- |
Copia-2_SL-LTR |
LTR/Copia |
| scaffold6554 |
14002 |
14320 |
- |
Copia-2_SL-I |
LTR/Copia |
| scaffold6554 |
16876 |
16924 |
+ |
A-rich |
Low_complexity |
| scaffold6554 |
17375 |
17560 |
+ |
(TA)n |
Simple_repeat |
| scaffold6554 |
17375 |
17408 |
+ |
(TA)n |
Simple_repeat |
| scaffold6554 |
17395 |
17560 |
+ |
RS3774 |
Unspecified |
| scaffold6554 |
17549 |
17678 |
- |
RS3774 |
Unspecified |
| scaffold6554 |
19693 |
19746 |
- |
HAT-N16_Mad |
DNA/hAT-Tip100 |
| scaffold6554 |
19809 |
19847 |
+ |
A-rich |
Low_complexity |
| scaffold6554 |
21773 |
21826 |
+ |
(AAC)n |
Simple_repeat |
| scaffold6554 |
22980 |
24726 |
+ |
Gypsy-52_Mad-I |
LTR/Gypsy |
| scaffold6554 |
25024 |
25676 |
+ |
Gypsy-47_Mad-I |
LTR/Gypsy |
| scaffold6554 |
25788 |
25931 |
- |
RS7064 |
Unspecified |
| scaffold6554 |
25811 |
25949 |
+ |
RS2202 |
Unspecified |
| scaffold6554 |
27926 |
28421 |
- |
RS9789 |
Unspecified |
| scaffold6554 |
29667 |
30225 |
- |
PL569 |
Unspecified |
| scaffold6554 |
30309 |
30342 |
+ |
A-rich |
Low_complexity |
| scaffold6554 |
31139 |
31155 |
+ |
(T)n |
Simple_repeat |
| scaffold6554 |
31285 |
31340 |
+ |
LTR-2_MX-LTR |
LTR |
| scaffold6554 |
32121 |
32327 |
+ |
RS1334 |
Unspecified |
| scaffold6554 |
32467 |
32560 |
- |
ATRAN |
DNA? |
| scaffold6554 |
32592 |
32823 |
+ |
RS271 |
Unspecified |
| scaffold6554 |
32821 |
33077 |
+ |
RS47 |
Unspecified |
| scaffold6554 |
33081 |
33143 |
+ |
RS2905 |
Unspecified |
| scaffold6554 |
33174 |
33220 |
+ |
GA-rich |
Low_complexity |
| scaffold6554 |
33737 |
33825 |
+ |
(CTGAA)n |
Simple_repeat |
| scaffold6554 |
33847 |
33881 |
+ |
(TAT)n |
Simple_repeat |
| scaffold6554 |
34172 |
34226 |
+ |
A-rich |
Low_complexity |
| scaffold6554 |
34422 |
35235 |
+ |
L1-1_GM |
LINE/L1 |
| scaffold6554 |
35375 |
35551 |
+ |
L1-1_GM |
LINE/L1 |
| scaffold6554 |
36138 |
36199 |
+ |
SHALINE20_MT |
LINE/L1 |
| scaffold6554 |
36572 |
36588 |
+ |
(A)n |
Simple_repeat |
| scaffold6554 |
37019 |
37040 |
+ |
(T)n |
Simple_repeat |
| scaffold6554 |
37390 |
37429 |
+ |
(TTATCA)n |
Simple_repeat |
| scaffold6554 |
37462 |
37598 |
- |
RS594 |
Unspecified |
| scaffold6554 |
37582 |
37709 |
- |
PL256 |
Unspecified |
| scaffold6554 |
37597 |
37709 |
+ |
PL607 |
Unspecified |
| scaffold6554 |
40970 |
41125 |
- |
RS3215 |
Unspecified |
| scaffold6554 |
41123 |
41311 |
+ |
(ATAAT)n |
Simple_repeat |
| scaffold6554 |
41241 |
41311 |
+ |
(ATAAT)n |
Simple_repeat |
| scaffold6554 |
41911 |
41985 |
- |
RS594 |
Unspecified |
| scaffold6554 |
42457 |
42551 |
+ |
(ATAAT)n |
Simple_repeat |
| scaffold6554 |
42670 |
42802 |
+ |
(TTATTG)n |
Simple_repeat |
| scaffold6554 |
42805 |
42839 |
+ |
(T)n |
Simple_repeat |
| scaffold6554 |
43888 |
44074 |
+ |
(ATT)n |
Simple_repeat |
| scaffold6554 |
44080 |
44581 |
- |
PL141 |
Unspecified |
| scaffold6554 |
44582 |
44621 |
+ |
(TTG)n |
Simple_repeat |
| scaffold6554 |
45915 |
46710 |
- |
L1-15_GM |
LINE/L1 |
| scaffold6554 |
49286 |
49305 |
+ |
EnSpm1_SB |
DNA/CMC-EnSpm |
| scaffold6554 |
49306 |
49344 |
+ |
(TTA)n |
Simple_repeat |
| scaffold6554 |
49345 |
49386 |
+ |
EnSpm1_SB |
DNA/CMC-EnSpm |
| scaffold6554 |
49563 |
49593 |
+ |
(TCA)n |
Simple_repeat |
| scaffold6554 |
49698 |
49870 |
+ |
PL111 |
Unspecified |
| scaffold6554 |
52589 |
52633 |
+ |
(ATTTGTT)n |
Simple_repeat |
| scaffold6554 |
53471 |
53502 |
+ |
(GGTTGA)n |
Simple_repeat |
| scaffold6554 |
53852 |
54138 |
- |
RIRE1_I-int |
LTR/Copia |
| scaffold6554 |
55238 |
55277 |
+ |
(GTAT)n |
Simple_repeat |
| scaffold6554 |
55821 |
55866 |
- |
RS784 |
Unspecified |
| scaffold6554 |
55848 |
56844 |
- |
RS3063 |
Unspecified |