scaffold6611 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold6611 |
652 |
1001 |
+ |
RS3913 |
Unspecified |
| scaffold6611 |
1003 |
1108 |
- |
RS1095 |
Unspecified |
| scaffold6611 |
1264 |
1371 |
+ |
RS6153 |
Unspecified |
| scaffold6611 |
1351 |
1474 |
+ |
RS11205 |
Unspecified |
| scaffold6611 |
1560 |
1618 |
+ |
RS11205 |
Unspecified |
| scaffold6611 |
2140 |
2157 |
+ |
(T)n |
Simple_repeat |
| scaffold6611 |
2327 |
2504 |
- |
PL292 |
Unspecified |
| scaffold6611 |
2430 |
2554 |
+ |
A-rich |
Low_complexity |
| scaffold6611 |
2506 |
2554 |
+ |
A-rich |
Low_complexity |
| scaffold6611 |
3132 |
3429 |
+ |
(T)n |
Simple_repeat |
| scaffold6611 |
3132 |
3224 |
+ |
(T)n |
Simple_repeat |
| scaffold6611 |
3205 |
3429 |
- |
PL292 |
Unspecified |
| scaffold6611 |
3488 |
3510 |
+ |
(A)n |
Simple_repeat |
| scaffold6611 |
7621 |
7721 |
+ |
RS124 |
Unspecified |
| scaffold6611 |
8492 |
8734 |
- |
RS921 |
Unspecified |
| scaffold6611 |
8657 |
8765 |
- |
RS1111 |
Unspecified |
| scaffold6611 |
9817 |
9849 |
+ |
(TATT)n |
Simple_repeat |
| scaffold6611 |
10925 |
11198 |
+ |
RS18302 |
Unspecified |
| scaffold6611 |
11026 |
11306 |
+ |
RS6110 |
Unspecified |
| scaffold6611 |
15837 |
15864 |
+ |
(TTG)n |
Simple_repeat |
| scaffold6611 |
16155 |
16185 |
+ |
(TGTAT)n |
Simple_repeat |
| scaffold6611 |
16213 |
16484 |
+ |
RS1182 |
Unspecified |
| scaffold6611 |
16671 |
16775 |
+ |
RS2847 |
Unspecified |
| scaffold6611 |
17050 |
17403 |
+ |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold6611 |
17178 |
17395 |
+ |
Copia-79_Mad-I |
LTR/Copia |
| scaffold6611 |
17501 |
17790 |
+ |
LTR2-ZM_LTR |
LTR |
| scaffold6611 |
18586 |
18649 |
+ |
Copia-79_Mad-I |
LTR/Copia |
| scaffold6611 |
18743 |
18819 |
+ |
Copia-79_Mad-I |
LTR/Copia |
| scaffold6611 |
19090 |
19915 |
+ |
Copia-79_Mad-I |
LTR/Copia |
| scaffold6611 |
20410 |
22066 |
+ |
Copia-79_Mad-I |
LTR/Copia |
| scaffold6611 |
20410 |
21973 |
+ |
Copia-79_Mad-I |
LTR/Copia |
| scaffold6611 |
21957 |
22066 |
- |
RS254 |
Unspecified |
| scaffold6611 |
22768 |
22796 |
+ |
(CAC)n |
Simple_repeat |
| scaffold6611 |
23145 |
23173 |
+ |
(T)n |
Simple_repeat |
| scaffold6611 |
26903 |
26938 |
+ |
(AATA)n |
Simple_repeat |
| scaffold6611 |
27121 |
27294 |
- |
PL517 |
Unspecified |
| scaffold6611 |
29703 |
29744 |
- |
PL517 |
Unspecified |
| scaffold6611 |
29773 |
29816 |
- |
RS18032 |
Unspecified |
| scaffold6611 |
29785 |
29964 |
- |
RS5 |
Unspecified |
| scaffold6611 |
30136 |
30175 |
+ |
(CACTTCT)n |
Simple_repeat |
| scaffold6611 |
30246 |
30314 |
+ |
(CGGTGA)n |
Simple_repeat |
| scaffold6611 |
30484 |
30524 |
+ |
(TTGTTAA)n |
Simple_repeat |
| scaffold6611 |
30997 |
31111 |
+ |
RS16853 |
Unspecified |
| scaffold6611 |
33739 |
33768 |
+ |
(T)n |
Simple_repeat |
| scaffold6611 |
42234 |
42257 |
+ |
(ACT)n |
Simple_repeat |
| scaffold6611 |
42436 |
42483 |
+ |
GA-rich |
Low_complexity |
| scaffold6611 |
42604 |
42650 |
+ |
(GGT)n |
Simple_repeat |
| scaffold6611 |
42848 |
42901 |
+ |
A-rich |
Low_complexity |
| scaffold6611 |
43071 |
43192 |
- |
RS41 |
Unspecified |
| scaffold6611 |
43427 |
43625 |
+ |
RS152 |
Unspecified |
| scaffold6611 |
43627 |
43805 |
- |
RS503 |
Unspecified |
| scaffold6611 |
43764 |
43814 |
- |
RS15122 |
Unspecified |
| scaffold6611 |
43977 |
44068 |
+ |
LTR-7_Mad-LTR |
LTR |
| scaffold6611 |
44375 |
44466 |
+ |
LTR-7_Mad-LTR |
LTR |
| scaffold6611 |
44547 |
44789 |
+ |
PL504 |
Unspecified |
| scaffold6611 |
45680 |
45806 |
+ |
RS3596 |
Unspecified |
| scaffold6611 |
47356 |
47484 |
- |
RS7174 |
Unspecified |
| scaffold6611 |
47764 |
48682 |
+ |
RS1013 |
Unspecified |
| scaffold6611 |
48162 |
49482 |
+ |
RS700 |
Unspecified |
| scaffold6611 |
49849 |
49945 |
+ |
ATCopia27_I-int |
LTR/Copia |
| scaffold6611 |
50108 |
50292 |
+ |
META1_I-int |
LTR/Copia |
| scaffold6611 |
50108 |
50480 |
+ |
META1_I-int |
LTR/Copia |
| scaffold6611 |
50253 |
50480 |
+ |
RS3596 |
Unspecified |
| scaffold6611 |
50495 |
50511 |
+ |
(T)n |
Simple_repeat |
| scaffold6611 |
53344 |
53483 |
+ |
(CCAGCA)n |
Simple_repeat |
| scaffold6611 |
54947 |
54996 |
+ |
(TTTTTTTTTC)n |
Simple_repeat |
| scaffold6611 |
55372 |
55530 |
+ |
(A)n |
Simple_repeat |
| scaffold6611 |
55512 |
55530 |
+ |
(A)n |
Simple_repeat |
| scaffold6611 |
55512 |
55583 |
+ |
(A)n |
Simple_repeat |
| scaffold6611 |
55524 |
55583 |
+ |
RS257 |
Unspecified |
| scaffold6611 |
55531 |
55977 |
+ |
RS338 |
Unspecified |
| scaffold6611 |
56101 |
56131 |
+ |
(TAATTT)n |
Simple_repeat |
| scaffold6611 |
56289 |
56357 |
+ |
(ATTTG)n |
Simple_repeat |
| scaffold6611 |
58426 |
58493 |
- |
RS54 |
Unspecified |
| scaffold6611 |
58433 |
58491 |
+ |
RS7001 |
Unspecified |
| scaffold6611 |
63392 |
63433 |
+ |
(A)n |
Simple_repeat |
| scaffold6611 |
63434 |
63456 |
+ |
A-rich |
Low_complexity |
| scaffold6611 |
65371 |
65591 |
- |
RS138 |
Unspecified |
| scaffold6611 |
67220 |
67463 |
- |
RS138 |
Unspecified |
| scaffold6611 |
68524 |
68682 |
- |
RS38 |
Unspecified |
| scaffold6611 |
68886 |
69022 |
+ |
RS8 |
Unspecified |
| scaffold6611 |
69609 |
69758 |
+ |
RS311 |
Unspecified |
| scaffold6611 |
69729 |
69878 |
+ |
RS8 |
Unspecified |
| scaffold6611 |
69768 |
69878 |
- |
RS8 |
Unspecified |
| scaffold6611 |
70201 |
70219 |
+ |
(A)n |
Simple_repeat |
| scaffold6611 |
70306 |
70552 |
+ |
RS17600 |
Unspecified |
| scaffold6611 |
71853 |
71889 |
+ |
A-rich |
Low_complexity |