scaffold6665 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold6665 |
4 |
372 |
+ |
PL914 |
Unspecified |
| scaffold6665 |
370 |
1698 |
- |
gypsy |
gypsy(TransposonPSI) |
| scaffold6665 |
373 |
1535 |
- |
Gypsy-I_MT |
LTR/Gypsy |
| scaffold6665 |
1731 |
1770 |
+ |
(TTTG)n |
Simple_repeat |
| scaffold6665 |
1922 |
1978 |
+ |
(TTTG)n |
Simple_repeat |
| scaffold6665 |
2871 |
3077 |
- |
Gypsy-I_MT |
LTR/Gypsy |
| scaffold6665 |
3202 |
3329 |
- |
PL947 |
Unspecified |
| scaffold6665 |
3417 |
3862 |
- |
PL947 |
Unspecified |
| scaffold6665 |
4327 |
5518 |
+ |
PL956 |
Unspecified |
| scaffold6665 |
4583 |
6120 |
- |
RS51 |
Unspecified |
| scaffold6665 |
6680 |
6715 |
+ |
(ATATTCA)n |
Simple_repeat |
| scaffold6665 |
7265 |
7327 |
+ |
(TTA)n |
Simple_repeat |
| scaffold6665 |
7762 |
7790 |
+ |
(TTTAA)n |
Simple_repeat |
| scaffold6665 |
8785 |
8821 |
+ |
(ATA)n |
Simple_repeat |
| scaffold6665 |
9071 |
9105 |
+ |
(TATGT)n |
Simple_repeat |
| scaffold6665 |
9602 |
9660 |
+ |
(AATT)n |
Simple_repeat |
| scaffold6665 |
10227 |
10339 |
+ |
A-rich |
Low_complexity |
| scaffold6665 |
10340 |
10413 |
- |
Gypsy-72-LTR_ZM |
LTR/Gypsy |
| scaffold6665 |
12152 |
12180 |
+ |
(G)n |
Simple_repeat |
| scaffold6665 |
12637 |
14137 |
- |
RS3148 |
Unspecified |
| scaffold6665 |
14381 |
14409 |
+ |
(A)n |
Simple_repeat |
| scaffold6665 |
14465 |
15735 |
- |
RS443 |
Unspecified |
| scaffold6665 |
15720 |
16419 |
+ |
RS14 |
Unspecified |
| scaffold6665 |
18122 |
18192 |
+ |
(TTTCAAT)n |
Simple_repeat |
| scaffold6665 |
18464 |
18544 |
+ |
COP14_I_MT-int |
LTR/Copia |
| scaffold6665 |
18477 |
18604 |
+ |
Gypsy-72-LTR_ZM |
LTR/Gypsy |
| scaffold6665 |
19636 |
19689 |
+ |
(TTTAATA)n |
Simple_repeat |
| scaffold6665 |
19968 |
20029 |
+ |
(TAT)n |
Simple_repeat |
| scaffold6665 |
20437 |
20486 |
+ |
A-rich |
Low_complexity |
| scaffold6665 |
20517 |
20627 |
- |
PL784 |
Unspecified |
| scaffold6665 |
21869 |
21903 |
- |
Copia-71_BRa-I |
LTR/Copia |
| scaffold6665 |
21901 |
22568 |
- |
PL823 |
Unspecified |
| scaffold6665 |
22569 |
22753 |
+ |
RS57 |
Unspecified |
| scaffold6665 |
23873 |
24170 |
+ |
RS14 |
Unspecified |
| scaffold6665 |
24144 |
24684 |
- |
PL874 |
Unspecified |
| scaffold6665 |
24708 |
24753 |
+ |
(TA)n |
Simple_repeat |
| scaffold6665 |
25190 |
25220 |
+ |
(TATT)n |
Simple_repeat |
| scaffold6665 |
25733 |
25870 |
+ |
RS3286 |
Unspecified |
| scaffold6665 |
26793 |
26844 |
+ |
(TTG)n |
Simple_repeat |
| scaffold6665 |
26845 |
26933 |
+ |
(TTA)n |
Simple_repeat |
| scaffold6665 |
26934 |
27012 |
+ |
(TTG)n |
Simple_repeat |
| scaffold6665 |
26996 |
27025 |
+ |
(TTATT)n |
Simple_repeat |
| scaffold6665 |
27538 |
27569 |
+ |
A-rich |
Low_complexity |
| scaffold6665 |
27712 |
27779 |
- |
Gypsy-13_TA-I |
LTR/Gypsy |
| scaffold6665 |
29102 |
30514 |
+ |
RS57 |
Unspecified |
| scaffold6665 |
30897 |
30956 |
+ |
A-rich |
Low_complexity |
| scaffold6665 |
31167 |
31514 |
- |
PL143 |
Unspecified |
| scaffold6665 |
31840 |
31876 |
+ |
A-rich |
Low_complexity |
| scaffold6665 |
32241 |
32358 |
- |
PL251 |
Unspecified |
| scaffold6665 |
32459 |
32534 |
+ |
(TTAT)n |
Simple_repeat |
| scaffold6665 |
32972 |
33042 |
+ |
(TA)n |
Simple_repeat |
| scaffold6665 |
33098 |
33865 |
+ |
PL344 |
Unspecified |
| scaffold6665 |
34260 |
34372 |
+ |
RS3286 |
Unspecified |
| scaffold6665 |
34594 |
34631 |
+ |
(AGAGC)n |
Simple_repeat |
| scaffold6665 |
34709 |
34807 |
+ |
(TGT)n |
Simple_repeat |
| scaffold6665 |
34883 |
35016 |
- |
SHACOP15_LTR_MT |
LTR/Copia |
| scaffold6665 |
35313 |
35352 |
+ |
(TCTTTGT)n |
Simple_repeat |
| scaffold6665 |
36725 |
36742 |
+ |
(TGA)n |
Simple_repeat |
| scaffold6665 |
40012 |
40371 |
- |
Atlantys2_I-int |
LTR/Gypsy |
| scaffold6665 |
40387 |
41031 |
- |
gypsy |
gypsy(TransposonPSI) |