scaffold6681 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold6681 |
236 |
935 |
+ |
Gypsy-137_GM-I |
LTR/Gypsy |
| scaffold6681 |
1301 |
3743 |
+ |
Gypsy-137_GM-I |
LTR/Gypsy |
| scaffold6681 |
3744 |
4371 |
+ |
Gypsy-137_GM-I |
LTR/Gypsy |
| scaffold6681 |
4844 |
4881 |
+ |
(TTCTTTC)n |
Simple_repeat |
| scaffold6681 |
4882 |
4894 |
+ |
(TTCT)n |
Simple_repeat |
| scaffold6681 |
5256 |
5292 |
+ |
(TTG)n |
Simple_repeat |
| scaffold6681 |
6478 |
6531 |
+ |
(TGAGGA)n |
Simple_repeat |
| scaffold6681 |
6718 |
6996 |
- |
RS2545 |
Unspecified |
| scaffold6681 |
7176 |
7223 |
+ |
GA-rich |
Low_complexity |
| scaffold6681 |
7436 |
7456 |
+ |
GYPSY3-I_MT |
LTR/Gypsy |
| scaffold6681 |
7457 |
7536 |
- |
Gypsy2-I_MT |
LTR/Gypsy |
| scaffold6681 |
7537 |
7551 |
+ |
GYPSY3-I_MT |
LTR/Gypsy |
| scaffold6681 |
7722 |
7965 |
- |
PL904 |
Unspecified |
| scaffold6681 |
9297 |
9460 |
+ |
PL761 |
Unspecified |
| scaffold6681 |
9992 |
10026 |
+ |
(A)n |
Simple_repeat |
| scaffold6681 |
10561 |
10712 |
- |
Copia-3_PTri-I |
LTR/Copia |
| scaffold6681 |
11244 |
11304 |
- |
PIGY-I_PS |
LTR/Gypsy |
| scaffold6681 |
11327 |
11361 |
+ |
(TAA)n |
Simple_repeat |
| scaffold6681 |
11717 |
11753 |
+ |
A-rich |
Low_complexity |
| scaffold6681 |
13139 |
13331 |
+ |
(TCCGG)n |
Simple_repeat |
| scaffold6681 |
15947 |
15983 |
+ |
(TTAGGGTTT)n |
Simple_repeat |
| scaffold6681 |
15990 |
16054 |
+ |
(TGG)n |
Simple_repeat |
| scaffold6681 |
16055 |
16072 |
+ |
(TGGAGG)n |
Simple_repeat |
| scaffold6681 |
16060 |
16128 |
+ |
A-rich |
Low_complexity |
| scaffold6681 |
16355 |
16514 |
- |
RS2331 |
Unspecified |
| scaffold6681 |
16834 |
16862 |
+ |
A-rich |
Low_complexity |
| scaffold6681 |
19356 |
19406 |
+ |
A-rich |
Low_complexity |
| scaffold6681 |
20811 |
20841 |
+ |
A-rich |
Low_complexity |
| scaffold6681 |
20960 |
21038 |
- |
Copia-106_Mad-I |
LTR/Copia |
| scaffold6681 |
22220 |
22325 |
+ |
A-rich |
Low_complexity |
| scaffold6681 |
23042 |
23197 |
- |
RS3465 |
Unspecified |
| scaffold6681 |
23465 |
23494 |
+ |
(T)n |
Simple_repeat |
| scaffold6681 |
24258 |
24756 |
+ |
PL340 |
Unspecified |
| scaffold6681 |
24759 |
24962 |
+ |
Copia-67_GM-I |
LTR/Copia |
| scaffold6681 |
24759 |
24882 |
+ |
Copia-67_GM-I |
LTR/Copia |
| scaffold6681 |
24862 |
24962 |
- |
RS2746 |
Unspecified |
| scaffold6681 |
26386 |
26465 |
+ |
RS17 |
Unspecified |
| scaffold6681 |
26601 |
26617 |
+ |
(T)n |
Simple_repeat |
| scaffold6681 |
27209 |
27293 |
- |
HADES_TA |
DNA/TcMar-Stowaway |
| scaffold6681 |
27299 |
27324 |
+ |
(A)n |
Simple_repeat |
| scaffold6681 |
27399 |
27660 |
+ |
(CTGAA)n |
Simple_repeat |
| scaffold6681 |
27399 |
27621 |
+ |
(CTGAA)n |
Simple_repeat |
| scaffold6681 |
27592 |
27660 |
+ |
RS14529 |
Unspecified |
| scaffold6681 |
27708 |
27744 |
+ |
(T)n |
Simple_repeat |
| scaffold6681 |
27773 |
27804 |
+ |
(T)n |
Simple_repeat |
| scaffold6681 |
28035 |
28160 |
+ |
RS15470 |
Unspecified |
| scaffold6681 |
28597 |
28616 |
+ |
(A)n |
Simple_repeat |
| scaffold6681 |
28769 |
28924 |
+ |
PL9 |
Unspecified |
| scaffold6681 |
28776 |
28944 |
+ |
PL9 |
Unspecified |
| scaffold6681 |
31115 |
31157 |
+ |
A-rich |
Low_complexity |
| scaffold6681 |
33866 |
33910 |
+ |
(AAT)n |
Simple_repeat |
| scaffold6681 |
34112 |
34132 |
+ |
(AATT)n |
Simple_repeat |
| scaffold6681 |
34261 |
34687 |
- |
RS458 |
Unspecified |
| scaffold6681 |
34946 |
35326 |
- |
RS458 |
Unspecified |
| scaffold6681 |
35601 |
35982 |
- |
RS458 |
Unspecified |
| scaffold6681 |
36402 |
36608 |
+ |
PL859 |
Unspecified |
| scaffold6681 |
36505 |
36758 |
- |
RS3687 |
Unspecified |
| scaffold6681 |
36606 |
36754 |
+ |
RS2812 |
Unspecified |
| scaffold6681 |
36696 |
36876 |
+ |
RS10325 |
Unspecified |
| scaffold6681 |
36953 |
37000 |
+ |
A-rich |
Low_complexity |
| scaffold6681 |
37246 |
37406 |
+ |
RS5760 |
Unspecified |
| scaffold6681 |
37996 |
38159 |
+ |
RS5760 |
Unspecified |
| scaffold6681 |
38184 |
38258 |
+ |
(TTTTA)n |
Simple_repeat |
| scaffold6681 |
38240 |
38306 |
+ |
(TTTGA)n |
Simple_repeat |
| scaffold6681 |
38751 |
38931 |
+ |
RS586 |
Unspecified |
| scaffold6681 |
39297 |
39318 |
+ |
(A)n |
Simple_repeat |
| scaffold6681 |
39996 |
40076 |
- |
RS356 |
Unspecified |
| scaffold6681 |
41137 |
41223 |
+ |
(ATT)n |
Simple_repeat |
| scaffold6681 |
42602 |
42642 |
+ |
(TTAATA)n |
Simple_repeat |
| scaffold6681 |
43014 |
43030 |
+ |
(A)n |
Simple_repeat |
| scaffold6681 |
44139 |
44232 |
+ |
(ATAAT)n |
Simple_repeat |
| scaffold6681 |
45125 |
45374 |
+ |
RS18125 |
Unspecified |
| scaffold6681 |
45715 |
45827 |
+ |
RS736 |
Unspecified |
| scaffold6681 |
53437 |
53456 |
+ |
(A)n |
Simple_repeat |
| scaffold6681 |
53577 |
53618 |
+ |
(A)n |
Simple_repeat |
| scaffold6681 |
54874 |
55100 |
+ |
RS17401 |
Unspecified |
| scaffold6681 |
55358 |
55508 |
+ |
RS12595 |
Unspecified |
| scaffold6681 |
56054 |
56250 |
+ |
RS17401 |
Unspecified |
| scaffold6681 |
56565 |
56717 |
+ |
RS12595 |
Unspecified |
| scaffold6681 |
56808 |
56931 |
+ |
RS12378 |
Unspecified |
| scaffold6681 |
57078 |
57294 |
+ |
RS16146 |
Unspecified |
| scaffold6681 |
57496 |
57722 |
+ |
RS16006 |
Unspecified |
| scaffold6681 |
57902 |
57928 |
+ |
(TCT)n |
Simple_repeat |
| scaffold6681 |
58341 |
58481 |
+ |
ATCopia14I |
LTR/Copia |
| scaffold6681 |
58477 |
58692 |
- |
RS3691 |
Unspecified |
| scaffold6681 |
58865 |
58938 |
- |
PL673 |
Unspecified |
| scaffold6681 |
59484 |
59738 |
+ |
Gypsy-72_GM-I |
LTR/Gypsy |
| scaffold6681 |
59611 |
59738 |
+ |
Gypsy-72_GM-I |
LTR/Gypsy |
| scaffold6681 |
60425 |
60604 |
+ |
RS14167 |
Unspecified |
| scaffold6681 |
60597 |
60675 |
- |
RS12885 |
Unspecified |
| scaffold6681 |
60608 |
60667 |
- |
RS12357 |
Unspecified |
| scaffold6681 |
60610 |
60675 |
- |
RS13929 |
Unspecified |
| scaffold6681 |
60617 |
60675 |
- |
RS93 |
Unspecified |
| scaffold6681 |
61131 |
61209 |
+ |
RS837 |
Unspecified |
| scaffold6681 |
61536 |
61626 |
+ |
(TGGATA)n |
Simple_repeat |
| scaffold6681 |
61703 |
62277 |
- |
RS2160 |
Unspecified |
| scaffold6681 |
62306 |
62483 |
- |
RS15292 |
Unspecified |
| scaffold6681 |
62440 |
62671 |
+ |
RS837 |
Unspecified |
| scaffold6681 |
62965 |
63159 |
- |
PL501 |
Unspecified |
| scaffold6681 |
63159 |
63375 |
+ |
RS16146 |
Unspecified |
| scaffold6681 |
63533 |
63580 |
+ |
A-rich |
Low_complexity |
| scaffold6681 |
63578 |
63804 |
+ |
RS16006 |
Unspecified |
| scaffold6681 |
63884 |
63905 |
+ |
(T)n |
Simple_repeat |
| scaffold6681 |
64066 |
64152 |
+ |
TRAMET1 |
DNA/TcMar-Stowaway |
| scaffold6681 |
64306 |
64368 |
+ |
(TCTTCT)n |
Simple_repeat |
| scaffold6681 |
64430 |
64451 |
+ |
(TTC)n |
Simple_repeat |
| scaffold6681 |
65594 |
65694 |
+ |
RS17401 |
Unspecified |
| scaffold6681 |
65967 |
66087 |
+ |
RS12378 |
Unspecified |
| scaffold6681 |
66223 |
66465 |
+ |
RS16146 |
Unspecified |
| scaffold6681 |
67072 |
67181 |
+ |
RS16146 |
Unspecified |
| scaffold6681 |
67164 |
67242 |
- |
PL492 |
Unspecified |
| scaffold6681 |
67277 |
67420 |
+ |
(TTCAGAAAAC)n |
Simple_repeat |
| scaffold6681 |
67450 |
67558 |
+ |
EnSpm-34_SBi |
DNA/CMC-EnSpm |
| scaffold6681 |
67559 |
67587 |
+ |
(TAC)n |
Simple_repeat |
| scaffold6681 |
68744 |
68800 |
+ |
(ATGG)n |
Simple_repeat |
| scaffold6681 |
68807 |
68834 |
+ |
(CATC)n |
Simple_repeat |
| scaffold6681 |
68870 |
68901 |
+ |
(AT)n |
Simple_repeat |
| scaffold6681 |
69220 |
69270 |
+ |
RS16146 |
Unspecified |
| scaffold6681 |
69325 |
69499 |
+ |
RS1329 |
Unspecified |
| scaffold6681 |
69525 |
69611 |
+ |
RS16146 |
Unspecified |
| scaffold6681 |
69958 |
70000 |
+ |
(ATTTTAT)n |
Simple_repeat |
| scaffold6681 |
70520 |
70651 |
+ |
RS16006 |
Unspecified |
| scaffold6681 |
70631 |
70715 |
+ |
RS16006 |
Unspecified |
| scaffold6681 |
70770 |
71356 |
- |
PL711 |
Unspecified |
| scaffold6681 |
71998 |
72535 |
+ |
PL566 |
Unspecified |
| scaffold6681 |
72452 |
72574 |
- |
RS4419 |
Unspecified |
| scaffold6681 |
72746 |
72782 |
+ |
(TACACT)n |
Simple_repeat |
| scaffold6681 |
73020 |
73119 |
- |
RS2069 |
Unspecified |
| scaffold6681 |
74355 |
74993 |
+ |
RS516 |
Unspecified |
| scaffold6681 |
76573 |
76591 |
+ |
(A)n |
Simple_repeat |
| scaffold6681 |
80907 |
81022 |
+ |
RS972 |
Unspecified |