scaffold6727 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold6727 |
1 |
1109 |
+ |
RS934 |
Unspecified |
| scaffold6727 |
1128 |
1295 |
+ |
RS108 |
Unspecified |
| scaffold6727 |
1190 |
1358 |
+ |
RS108 |
Unspecified |
| scaffold6727 |
1251 |
1420 |
+ |
RS108 |
Unspecified |
| scaffold6727 |
1979 |
2561 |
+ |
RS357 |
Unspecified |
| scaffold6727 |
2865 |
2901 |
+ |
(AACACGA)n |
Simple_repeat |
| scaffold6727 |
5321 |
5524 |
+ |
RS28 |
Unspecified |
| scaffold6727 |
5873 |
5885 |
+ |
(TTAT)n |
Simple_repeat |
| scaffold6727 |
5886 |
5930 |
+ |
(TTTTA)n |
Simple_repeat |
| scaffold6727 |
5931 |
5941 |
+ |
(TTAT)n |
Simple_repeat |
| scaffold6727 |
6929 |
7212 |
+ |
LTR-1_SBi-LTR |
LTR |
| scaffold6727 |
7234 |
7261 |
+ |
A-rich |
Low_complexity |
| scaffold6727 |
7957 |
8212 |
+ |
RS1 |
Unspecified |
| scaffold6727 |
9258 |
9286 |
+ |
(T)n |
Simple_repeat |
| scaffold6727 |
10640 |
10725 |
- |
EnSpm-11_STu |
DNA/CMC-EnSpm |
| scaffold6727 |
12870 |
12982 |
- |
RS1111 |
Unspecified |
| scaffold6727 |
12934 |
13289 |
- |
RS831 |
Unspecified |
| scaffold6727 |
13388 |
14044 |
- |
RS1111 |
Unspecified |
| scaffold6727 |
14045 |
14722 |
- |
RS214 |
Unspecified |
| scaffold6727 |
14780 |
15589 |
+ |
L1-1_GM |
LINE/L1 |
| scaffold6727 |
15734 |
15900 |
+ |
LINE1-12_SBi |
LINE/L1 |
| scaffold6727 |
15976 |
16136 |
+ |
RS4822 |
Unspecified |
| scaffold6727 |
16038 |
16157 |
+ |
LINE1I_MT |
LINE/L1 |
| scaffold6727 |
16912 |
16969 |
+ |
A-rich |
Low_complexity |
| scaffold6727 |
17153 |
17184 |
+ |
(A)n |
Simple_repeat |
| scaffold6727 |
17410 |
17476 |
+ |
(TTG)n |
Simple_repeat |
| scaffold6727 |
17477 |
17500 |
+ |
(CGT)n |
Simple_repeat |
| scaffold6727 |
17963 |
17988 |
+ |
(ATT)n |
Simple_repeat |
| scaffold6727 |
19400 |
20008 |
- |
LINE |
LINE(TransposonPSI) |
| scaffold6727 |
20177 |
20379 |
+ |
RS12612 |
Unspecified |
| scaffold6727 |
20378 |
20765 |
- |
PL753 |
Unspecified |
| scaffold6727 |
20379 |
20825 |
+ |
PL153 |
Unspecified |
| scaffold6727 |
21281 |
21694 |
- |
RS4863 |
Unspecified |
| scaffold6727 |
21548 |
21713 |
- |
PL753 |
Unspecified |
| scaffold6727 |
21706 |
21777 |
- |
PL607 |
Unspecified |
| scaffold6727 |
21819 |
21846 |
+ |
(TTATT)n |
Simple_repeat |
| scaffold6727 |
22041 |
22082 |
+ |
(TAT)n |
Simple_repeat |
| scaffold6727 |
22839 |
22869 |
+ |
(T)n |
Simple_repeat |
| scaffold6727 |
22875 |
23087 |
- |
RS5304 |
Unspecified |
| scaffold6727 |
24106 |
24229 |
- |
L1-5_STu |
LINE/L1 |
| scaffold6727 |
24271 |
24316 |
+ |
(TAT)n |
Simple_repeat |
| scaffold6727 |
25265 |
25316 |
+ |
(TATTTTT)n |
Simple_repeat |
| scaffold6727 |
25731 |
25995 |
- |
RS17600 |
Unspecified |
| scaffold6727 |
25963 |
26009 |
+ |
RS10261 |
Unspecified |
| scaffold6727 |
26285 |
26341 |
+ |
(TTAGTTT)n |
Simple_repeat |
| scaffold6727 |
27465 |
27604 |
+ |
RS463 |
Unspecified |
| scaffold6727 |
27686 |
27830 |
- |
RS4425 |
Unspecified |
| scaffold6727 |
28065 |
28102 |
+ |
A-rich |
Low_complexity |
| scaffold6727 |
29721 |
29739 |
+ |
(TAT)n |
Simple_repeat |
| scaffold6727 |
29740 |
29762 |
+ |
(TTTTA)n |
Simple_repeat |
| scaffold6727 |
29763 |
29799 |
+ |
(T)n |
Simple_repeat |
| scaffold6727 |
29909 |
29961 |
+ |
A-rich |
Low_complexity |
| scaffold6727 |
30356 |
30397 |
+ |
(GTG)n |
Simple_repeat |
| scaffold6727 |
30522 |
30559 |
+ |
(GTG)n |
Simple_repeat |
| scaffold6727 |
30745 |
31006 |
- |
RS458 |
Unspecified |
| scaffold6727 |
31196 |
31750 |
+ |
PL620 |
Unspecified |
| scaffold6727 |
33477 |
33870 |
- |
PL956 |
Unspecified |
| scaffold6727 |
34378 |
34414 |
+ |
(AACTCAAGC)n |
Simple_repeat |
| scaffold6727 |
34428 |
34452 |
+ |
(AGA)n |
Simple_repeat |
| scaffold6727 |
34633 |
34746 |
+ |
A-rich |
Low_complexity |
| scaffold6727 |
36573 |
36959 |
+ |
Gypsy2-SB_I-int |
LTR/Gypsy |