scaffold6797 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold6797 |
1 |
716 |
+ |
PL894 |
Unspecified |
| scaffold6797 |
659 |
962 |
+ |
PL495 |
Unspecified |
| scaffold6797 |
962 |
1774 |
- |
RS2918 |
Unspecified |
| scaffold6797 |
2954 |
6265 |
+ |
RS254 |
Unspecified |
| scaffold6797 |
8659 |
8677 |
+ |
(T)n |
Simple_repeat |
| scaffold6797 |
8848 |
8880 |
+ |
(TAAA)n |
Simple_repeat |
| scaffold6797 |
10018 |
10048 |
+ |
(ATTTTC)n |
Simple_repeat |
| scaffold6797 |
10200 |
10787 |
- |
PL216 |
Unspecified |
| scaffold6797 |
11220 |
11246 |
+ |
(AATT)n |
Simple_repeat |
| scaffold6797 |
13421 |
13758 |
+ |
RS42 |
Unspecified |
| scaffold6797 |
15274 |
15305 |
+ |
(TATT)n |
Simple_repeat |
| scaffold6797 |
15414 |
15679 |
+ |
RS1943 |
Unspecified |
| scaffold6797 |
15735 |
15774 |
+ |
(ATTAT)n |
Simple_repeat |
| scaffold6797 |
15877 |
16207 |
+ |
PL884 |
Unspecified |
| scaffold6797 |
16852 |
16925 |
+ |
(TAATTAA)n |
Simple_repeat |
| scaffold6797 |
18284 |
18321 |
+ |
GA-rich |
Low_complexity |
| scaffold6797 |
18541 |
18636 |
+ |
LINE1-66_SBi |
LINE/L1 |
| scaffold6797 |
19562 |
20751 |
+ |
SHALINE10_MT |
LINE/L1 |
| scaffold6797 |
20818 |
21258 |
+ |
L1-14_Mad |
LINE/L1 |
| scaffold6797 |
21575 |
21635 |
+ |
SHALINE10_MT |
LINE/L1 |
| scaffold6797 |
21767 |
21832 |
+ |
CACTA-P |
DNA/CMC-EnSpm |
| scaffold6797 |
21796 |
21984 |
- |
EnSpm-7_STu |
DNA/CMC-EnSpm |
| scaffold6797 |
21796 |
21873 |
- |
EnSpm-7_STu |
DNA/CMC-EnSpm |
| scaffold6797 |
21850 |
21984 |
- |
RS5085 |
Unspecified |
| scaffold6797 |
24040 |
24070 |
+ |
(CTG)n |
Simple_repeat |
| scaffold6797 |
25252 |
25437 |
- |
RS2138 |
Unspecified |
| scaffold6797 |
25930 |
25996 |
+ |
ENSPM-6_ZM |
DNA/CMC-EnSpm |
| scaffold6797 |
26604 |
26709 |
+ |
GA-rich |
Low_complexity |
| scaffold6797 |
27210 |
27319 |
+ |
(A)n |
Simple_repeat |
| scaffold6797 |
27210 |
27258 |
+ |
(A)n |
Simple_repeat |
| scaffold6797 |
27244 |
27319 |
+ |
RS7281 |
Unspecified |
| scaffold6797 |
27355 |
27382 |
+ |
(A)n |
Simple_repeat |
| scaffold6797 |
27381 |
27539 |
+ |
RS7281 |
Unspecified |
| scaffold6797 |
28025 |
28186 |
+ |
RS796 |
Unspecified |
| scaffold6797 |
28261 |
28312 |
+ |
(ATT)n |
Simple_repeat |
| scaffold6797 |
28536 |
28879 |
+ |
PL744 |
Unspecified |
| scaffold6797 |
29849 |
29913 |
- |
OARE1_I-int |
LTR/Copia |
| scaffold6797 |
31090 |
31128 |
+ |
A-rich |
Low_complexity |
| scaffold6797 |
31448 |
31533 |
- |
MuDR-3_GM |
DNA/MULE-MuDR |
| scaffold6797 |
31695 |
32039 |
- |
MuDR-5_Mad |
DNA/MULE-MuDR |
| scaffold6797 |
33287 |
33317 |
+ |
(ACC)n |
Simple_repeat |
| scaffold6797 |
33745 |
33782 |
+ |
(TTTGA)n |
Simple_repeat |
| scaffold6797 |
33851 |
33921 |
+ |
(TA)n |
Simple_repeat |
| scaffold6797 |
34185 |
34430 |
- |
RS660 |
Unspecified |
| scaffold6797 |
35646 |
35736 |
- |
Gypsy-193_ZM-I |
LTR/Gypsy |
| scaffold6797 |
36911 |
36957 |
+ |
(TTTTA)n |
Simple_repeat |
| scaffold6797 |
37353 |
37404 |
+ |
(AATATA)n |
Simple_repeat |
| scaffold6797 |
37384 |
37427 |
+ |
(TATTT)n |
Simple_repeat |
| scaffold6797 |
39074 |
39138 |
+ |
(ATTATTA)n |
Simple_repeat |
| scaffold6797 |
39513 |
39738 |
+ |
RS18 |
Unspecified |
| scaffold6797 |
39831 |
41259 |
- |
RS658 |
Unspecified |
| scaffold6797 |
41308 |
41357 |
- |
PL699 |
Unspecified |
| scaffold6797 |
41442 |
41570 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold6797 |
41572 |
41669 |
+ |
(ATT)n |
Simple_repeat |
| scaffold6797 |
43126 |
43143 |
+ |
(A)n |
Simple_repeat |
| scaffold6797 |
43234 |
43295 |
+ |
G-rich |
Low_complexity |
| scaffold6797 |
43809 |
43969 |
- |
RS2719 |
Unspecified |
| scaffold6797 |
43815 |
43989 |
+ |
RS233 |
Unspecified |
| scaffold6797 |
44790 |
45356 |
- |
PL396 |
Unspecified |
| scaffold6797 |
46399 |
46488 |
+ |
TPN1_IN |
DNA/CMC-EnSpm |
| scaffold6797 |
48075 |
48114 |
+ |
(ACA)n |
Simple_repeat |
| scaffold6797 |
49126 |
49208 |
+ |
(GGT)n |
Simple_repeat |
| scaffold6797 |
49210 |
49262 |
+ |
(TCCTC)n |
Simple_repeat |
| scaffold6797 |
49346 |
49555 |
- |
EnSpm-1_GM |
DNA/CMC-EnSpm |
| scaffold6797 |
50745 |
50899 |
+ |
(CCCGA)n |
Simple_repeat |
| scaffold6797 |
51611 |
51669 |
+ |
A-rich |
Low_complexity |
| scaffold6797 |
51707 |
51743 |
+ |
(ATAAAA)n |
Simple_repeat |
| scaffold6797 |
52134 |
52184 |
+ |
(AATTGAT)n |
Simple_repeat |
| scaffold6797 |
52319 |
52354 |
+ |
(ATAT)n |
Simple_repeat |
| scaffold6797 |
53025 |
53085 |
+ |
(GGT)n |
Simple_repeat |
| scaffold6797 |
53655 |
53698 |
+ |
(TTTATA)n |
Simple_repeat |
| scaffold6797 |
53714 |
53881 |
- |
hAT-7_PTr |
DNA/hAT-Ac |
| scaffold6797 |
53921 |
53965 |
+ |
(GGT)n |
Simple_repeat |
| scaffold6797 |
54119 |
54151 |
+ |
(T)n |
Simple_repeat |
| scaffold6797 |
56090 |
56183 |
- |
RS322 |
Unspecified |
| scaffold6797 |
56114 |
56323 |
+ |
RS322 |
Unspecified |
| scaffold6797 |
57054 |
57123 |
+ |
L1-24_CPa |
LINE/L1 |
| scaffold6797 |
58042 |
58064 |
+ |
(T)n |
Simple_repeat |
| scaffold6797 |
59043 |
59217 |
+ |
RS375 |
Unspecified |
| scaffold6797 |
59419 |
59779 |
+ |
RS8812 |
Unspecified |
| scaffold6797 |
60808 |
60873 |
+ |
(TTG)n |
Simple_repeat |
| scaffold6797 |
61365 |
61390 |
+ |
(T)n |
Simple_repeat |
| scaffold6797 |
61782 |
62241 |
- |
RS3632 |
Unspecified |
| scaffold6797 |
62239 |
62275 |
+ |
(T)n |
Simple_repeat |
| scaffold6797 |
62277 |
62626 |
- |
RS5516 |
Unspecified |
| scaffold6797 |
64209 |
65528 |
+ |
LINE |
LINE(TransposonPSI) |
| scaffold6797 |
64556 |
65405 |
+ |
L1-1_PTr |
LINE/L1 |
| scaffold6797 |
66668 |
66698 |
+ |
(A)n |
Simple_repeat |
| scaffold6797 |
66697 |
67026 |
- |
RS18020 |
Unspecified |
| scaffold6797 |
67357 |
67416 |
+ |
(TGAAGA)n |
Simple_repeat |
| scaffold6797 |
67544 |
67593 |
+ |
(TAG)n |
Simple_repeat |
| scaffold6797 |
68100 |
68151 |
+ |
Gypsy-43_STu-LTR |
LTR/Gypsy |
| scaffold6797 |
68215 |
68548 |
+ |
RS1034 |
Unspecified |
| scaffold6797 |
68801 |
68848 |
+ |
Gypsy-10_Mad-I |
LTR/Gypsy |
| scaffold6797 |
69546 |
69690 |
+ |
ATHATN5 |
DNA/hAT-Ac |
| scaffold6797 |
69640 |
69761 |
- |
hAT-17N1_ZM |
DNA/hAT-Ac |
| scaffold6797 |
69789 |
69867 |
+ |
A-rich |
Low_complexity |
| scaffold6797 |
69978 |
70096 |
+ |
(CT)n |
Simple_repeat |
| scaffold6797 |
70246 |
70588 |
+ |
PL37 |
Unspecified |
| scaffold6797 |
70829 |
70977 |
+ |
RS260 |
Unspecified |
| scaffold6797 |
71045 |
71168 |
- |
RS15184 |
Unspecified |
| scaffold6797 |
71192 |
71326 |
+ |
RS18353 |
Unspecified |
| scaffold6797 |
72172 |
72308 |
+ |
(CTT)n |
Simple_repeat |
| scaffold6797 |
74720 |
74955 |
+ |
RS217 |
Unspecified |
| scaffold6797 |
75355 |
75403 |
+ |
(AATCAA)n |
Simple_repeat |
| scaffold6797 |
75393 |
75448 |
+ |
(ATA)n |
Simple_repeat |
| scaffold6797 |
75645 |
75681 |
+ |
A-rich |
Low_complexity |
| scaffold6797 |
76891 |
76931 |
+ |
A-rich |
Low_complexity |
| scaffold6797 |
77110 |
77176 |
+ |
PL701 |
Unspecified |
| scaffold6797 |
77277 |
77431 |
+ |
ATCopia34_LTR |
LTR/Copia |
| scaffold6797 |
78014 |
78439 |
+ |
PL702 |
Unspecified |
| scaffold6797 |
78435 |
78604 |
- |
RS94 |
Unspecified |
| scaffold6797 |
78694 |
78751 |
+ |
(A)n |
Simple_repeat |
| scaffold6797 |
78694 |
79106 |
+ |
(A)n |
Simple_repeat |
| scaffold6797 |
78744 |
79106 |
+ |
RS8 |
Unspecified |
| scaffold6797 |
79164 |
79341 |
- |
Helitron4 |
RC/Helitron |
| scaffold6797 |
79444 |
79592 |
+ |
(AAT)n |
Simple_repeat |
| scaffold6797 |
80339 |
80386 |
+ |
(ATTAG)n |
Simple_repeat |
| scaffold6797 |
80490 |
82112 |
- |
RS265 |
Unspecified |
| scaffold6797 |
82104 |
82307 |
+ |
(ATATCT)n |
Simple_repeat |
| scaffold6797 |
82256 |
82468 |
+ |
(ATATCT)n |
Simple_repeat |
| scaffold6797 |
82256 |
82307 |
+ |
(ATATCT)n |
Simple_repeat |
| scaffold6797 |
82300 |
82468 |
- |
RS7560 |
Unspecified |
| scaffold6797 |
82474 |
82498 |
+ |
(TTAT)n |
Simple_repeat |
| scaffold6797 |
82499 |
82515 |
+ |
(A)n |
Simple_repeat |
| scaffold6797 |
82516 |
82532 |
+ |
A-rich |
Low_complexity |
| scaffold6797 |
82535 |
82568 |
+ |
(TA)n |
Simple_repeat |
| scaffold6797 |
82950 |
83216 |
- |
RS1780 |
Unspecified |
| scaffold6797 |
83404 |
85105 |
+ |
PL124 |
Unspecified |
| scaffold6797 |
85106 |
85624 |
+ |
(ATTTTG)n |
Simple_repeat |
| scaffold6797 |
85590 |
85624 |
+ |
(ATTTTG)n |
Simple_repeat |
| scaffold6797 |
85708 |
85796 |
+ |
(TAATTAT)n |
Simple_repeat |
| scaffold6797 |
85890 |
87224 |
+ |
Copia-4_GM-I |
LTR/Copia |
| scaffold6797 |
87632 |
87655 |
+ |
(GGCC)n |
Simple_repeat |
| scaffold6797 |
88087 |
88392 |
+ |
RS215 |
Unspecified |
| scaffold6797 |
88385 |
88815 |
+ |
RS215 |
Unspecified |
| scaffold6797 |
88828 |
89601 |
- |
RS884 |
Unspecified |
| scaffold6797 |
89747 |
89788 |
+ |
(TTTTGT)n |
Simple_repeat |
| scaffold6797 |
89838 |
89856 |
+ |
(A)n |
Simple_repeat |
| scaffold6797 |
90080 |
90225 |
+ |
RS215 |
Unspecified |
| scaffold6797 |
90117 |
90448 |
- |
RS1172 |
Unspecified |
| scaffold6797 |
90286 |
90468 |
- |
PL578 |
Unspecified |
| scaffold6797 |
90444 |
90994 |
+ |
PL782 |
Unspecified |
| scaffold6797 |
90988 |
91223 |
+ |
RS215 |
Unspecified |
| scaffold6797 |
91519 |
91876 |
- |
RS6506 |
Unspecified |
| scaffold6797 |
91953 |
91995 |
+ |
(T)n |
Simple_repeat |
| scaffold6797 |
92143 |
92197 |
+ |
(T)n |
Simple_repeat |
| scaffold6797 |
92988 |
93037 |
+ |
(ATT)n |
Simple_repeat |
| scaffold6797 |
93104 |
93268 |
+ |
RS217 |
Unspecified |
| scaffold6797 |
93490 |
93525 |
+ |
(TA)n |
Simple_repeat |
| scaffold6797 |
93803 |
93981 |
- |
RS38 |
Unspecified |
| scaffold6797 |
94917 |
94957 |
+ |
G-rich |
Low_complexity |
| scaffold6797 |
96572 |
97007 |
+ |
PL400 |
Unspecified |
| scaffold6797 |
97025 |
97057 |
+ |
(A)n |
Simple_repeat |
| scaffold6797 |
97277 |
97307 |
+ |
(T)n |
Simple_repeat |
| scaffold6797 |
99376 |
99410 |
+ |
(T)n |
Simple_repeat |
| scaffold6797 |
99665 |
99709 |
+ |
A-rich |
Low_complexity |