scaffold6806 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold6806 |
824 |
856 |
+ |
(ATTA)n |
Simple_repeat |
| scaffold6806 |
1278 |
1420 |
+ |
RS3655 |
Unspecified |
| scaffold6806 |
1417 |
1454 |
+ |
RS307 |
Unspecified |
| scaffold6806 |
1454 |
1550 |
+ |
RS307 |
Unspecified |
| scaffold6806 |
1810 |
1835 |
+ |
(CGGGC)n |
Simple_repeat |
| scaffold6806 |
2148 |
2804 |
+ |
ATCopia75_I-int |
LTR/Copia |
| scaffold6806 |
2803 |
3097 |
- |
RS10110 |
Unspecified |
| scaffold6806 |
6748 |
6887 |
- |
RS18 |
Unspecified |
| scaffold6806 |
8091 |
8152 |
+ |
RS5540 |
Unspecified |
| scaffold6806 |
8163 |
8479 |
- |
PL477 |
Unspecified |
| scaffold6806 |
8856 |
8898 |
+ |
A-rich |
Low_complexity |
| scaffold6806 |
8983 |
9210 |
+ |
RS589 |
Unspecified |
| scaffold6806 |
9100 |
9244 |
+ |
RS334 |
Unspecified |
| scaffold6806 |
9480 |
9494 |
+ |
Copia-77_SB-I |
LTR/Copia |
| scaffold6806 |
9495 |
9601 |
- |
Copia-45_ZM-I |
LTR/Copia |
| scaffold6806 |
9602 |
9621 |
+ |
Copia-77_SB-I |
LTR/Copia |
| scaffold6806 |
10767 |
10823 |
- |
RS3855 |
Unspecified |
| scaffold6806 |
10811 |
10895 |
- |
PL560 |
Unspecified |
| scaffold6806 |
10823 |
10895 |
- |
PL560 |
Unspecified |
| scaffold6806 |
10925 |
11118 |
- |
RS3855 |
Unspecified |
| scaffold6806 |
11118 |
11201 |
- |
RS4921 |
Unspecified |
| scaffold6806 |
13701 |
13730 |
+ |
(TATTTT)n |
Simple_repeat |
| scaffold6806 |
16120 |
16190 |
+ |
(AACATTT)n |
Simple_repeat |
| scaffold6806 |
17551 |
17761 |
- |
RS549 |
Unspecified |
| scaffold6806 |
21316 |
21337 |
+ |
(A)n |
Simple_repeat |
| scaffold6806 |
24002 |
24020 |
+ |
(TA)n |
Simple_repeat |
| scaffold6806 |
25780 |
25813 |
+ |
A-rich |
Low_complexity |
| scaffold6806 |
25841 |
25858 |
+ |
(A)n |
Simple_repeat |
| scaffold6806 |
26608 |
26672 |
+ |
A-rich |
Low_complexity |
| scaffold6806 |
26765 |
26815 |
+ |
(ATT)n |
Simple_repeat |
| scaffold6806 |
26847 |
26889 |
- |
RS1258 |
Unspecified |
| scaffold6806 |
27279 |
27306 |
+ |
(TTA)n |
Simple_repeat |
| scaffold6806 |
27947 |
28112 |
- |
PL517 |
Unspecified |
| scaffold6806 |
28671 |
28695 |
+ |
(A)n |
Simple_repeat |
| scaffold6806 |
30286 |
30335 |
+ |
(ATTATA)n |
Simple_repeat |
| scaffold6806 |
30510 |
30625 |
- |
DNA8-3_Mad |
DNA |
| scaffold6806 |
30793 |
30842 |
+ |
(ATAATA)n |
Simple_repeat |
| scaffold6806 |
31128 |
31184 |
+ |
DNA3-1_STu |
DNA/PIF-Harbinger |
| scaffold6806 |
31370 |
31394 |
+ |
(TAA)n |
Simple_repeat |
| scaffold6806 |
31472 |
31493 |
+ |
(A)n |
Simple_repeat |
| scaffold6806 |
31496 |
31563 |
+ |
(ATTTA)n |
Simple_repeat |
| scaffold6806 |
31536 |
31594 |
+ |
(TTATAT)n |
Simple_repeat |
| scaffold6806 |
32203 |
32246 |
+ |
A-rich |
Low_complexity |
| scaffold6806 |
32563 |
32716 |
+ |
RS16831 |
Unspecified |
| scaffold6806 |
33301 |
33325 |
+ |
(TGAA)n |
Simple_repeat |
| scaffold6806 |
33646 |
33885 |
+ |
(CTGAA)n |
Simple_repeat |
| scaffold6806 |
34101 |
34308 |
+ |
(AACTG)n |
Simple_repeat |
| scaffold6806 |
34821 |
34873 |
+ |
A-rich |
Low_complexity |
| scaffold6806 |
34879 |
34906 |
+ |
(AAT)n |
Simple_repeat |
| scaffold6806 |
35498 |
35591 |
+ |
RS9448 |
Unspecified |
| scaffold6806 |
36146 |
36269 |
- |
RS11718 |
Unspecified |
| scaffold6806 |
36599 |
36686 |
+ |
LTR-7_Mad-LTR |
LTR |
| scaffold6806 |
37319 |
37375 |
+ |
(TTTAT)n |
Simple_repeat |
| scaffold6806 |
38070 |
38120 |
+ |
RS18111 |
Unspecified |
| scaffold6806 |
38077 |
38187 |
+ |
RS6320 |
Unspecified |
| scaffold6806 |
38081 |
38174 |
- |
RS16382 |
Unspecified |
| scaffold6806 |
38081 |
38200 |
- |
RS16836 |
Unspecified |
| scaffold6806 |
39242 |
39268 |
+ |
(T)n |
Simple_repeat |
| scaffold6806 |
39608 |
39671 |
- |
RS1258 |
Unspecified |
| scaffold6806 |
39608 |
39690 |
+ |
RS17606 |
Unspecified |
| scaffold6806 |
40356 |
40427 |
- |
RS635 |
Unspecified |
| scaffold6806 |
42269 |
42295 |
+ |
(GAACA)n |
Simple_repeat |
| scaffold6806 |
42651 |
42699 |
+ |
(CACCACCG)n |
Simple_repeat |
| scaffold6806 |
47437 |
47511 |
+ |
A-rich |
Low_complexity |
| scaffold6806 |
47539 |
47557 |
+ |
(ATG)n |
Simple_repeat |
| scaffold6806 |
47958 |
48124 |
- |
RS17211 |
Unspecified |
| scaffold6806 |
47986 |
48124 |
- |
RS2386 |
Unspecified |
| scaffold6806 |
48359 |
48467 |
- |
RS3380 |
Unspecified |
| scaffold6806 |
48393 |
48476 |
+ |
RS376 |
Unspecified |
| scaffold6806 |
48525 |
48550 |
+ |
(A)n |
Simple_repeat |
| scaffold6806 |
48729 |
48843 |
+ |
RS972 |
Unspecified |
| scaffold6806 |
49083 |
49116 |
+ |
A-rich |
Low_complexity |
| scaffold6806 |
49644 |
50088 |
- |
PL2 |
Unspecified |
| scaffold6806 |
50246 |
50270 |
+ |
(T)n |
Simple_repeat |
| scaffold6806 |
50672 |
50736 |
+ |
(ATA)n |
Simple_repeat |
| scaffold6806 |
51330 |
51426 |
+ |
RS16382 |
Unspecified |
| scaffold6806 |
51632 |
51738 |
- |
RS750 |
Unspecified |
| scaffold6806 |
52831 |
52944 |
+ |
(CAACT)n |
Simple_repeat |
| scaffold6806 |
53464 |
53558 |
+ |
RS16382 |
Unspecified |
| scaffold6806 |
54176 |
54221 |
+ |
(TATT)n |
Simple_repeat |
| scaffold6806 |
55246 |
55336 |
- |
LTR-7_Mad-LTR |
LTR |
| scaffold6806 |
56363 |
56489 |
+ |
(AGCTG)n |
Simple_repeat |
| scaffold6806 |
56532 |
56594 |
+ |
(AAT)n |
Simple_repeat |
| scaffold6806 |
57183 |
57268 |
+ |
(AGCTG)n |
Simple_repeat |
| scaffold6806 |
57483 |
57669 |
- |
RS908 |
Unspecified |
| scaffold6806 |
58427 |
58473 |
+ |
(ATGATA)n |
Simple_repeat |
| scaffold6806 |
58924 |
58994 |
+ |
Copia-3_PTri-I |
LTR/Copia |
| scaffold6806 |
58995 |
59046 |
+ |
Copia-3_PTri-I |
LTR/Copia |
| scaffold6806 |
59351 |
59389 |
+ |
(ATTTTAA)n |
Simple_repeat |
| scaffold6806 |
59390 |
59438 |
+ |
A-rich |
Low_complexity |
| scaffold6806 |
59487 |
59532 |
+ |
G-rich |
Low_complexity |
| scaffold6806 |
59529 |
59655 |
+ |
RS2439 |
Unspecified |
| scaffold6806 |
59817 |
59912 |
+ |
RS16382 |
Unspecified |
| scaffold6806 |
60514 |
60650 |
- |
RS908 |
Unspecified |
| scaffold6806 |
60928 |
60966 |
+ |
(ATT)n |
Simple_repeat |
| scaffold6806 |
61125 |
61178 |
+ |
(TAAT)n |
Simple_repeat |
| scaffold6806 |
61396 |
61412 |
+ |
(A)n |
Simple_repeat |
| scaffold6806 |
62091 |
62109 |
+ |
(T)n |
Simple_repeat |
| scaffold6806 |
62970 |
63002 |
+ |
(TTA)n |
Simple_repeat |
| scaffold6806 |
63015 |
63062 |
+ |
(TTTAA)n |
Simple_repeat |
| scaffold6806 |
63260 |
63523 |
+ |
RS8857 |
Unspecified |
| scaffold6806 |
64073 |
64140 |
+ |
(AAGTC)n |
Simple_repeat |
| scaffold6806 |
64301 |
64380 |
- |
PL202 |
Unspecified |
| scaffold6806 |
64321 |
64380 |
+ |
PL934 |
Unspecified |
| scaffold6806 |
64335 |
64380 |
+ |
RS3805 |
Unspecified |
| scaffold6806 |
66289 |
66352 |
+ |
Gypsy-170_ZM-I |
LTR/Gypsy |
| scaffold6806 |
66474 |
66656 |
+ |
Gypsy-170_ZM-I |
LTR/Gypsy |
| scaffold6806 |
66858 |
67008 |
+ |
Gypsy-170_ZM-I |
LTR/Gypsy |
| scaffold6806 |
67754 |
67824 |
+ |
(GTCAA)n |
Simple_repeat |
| scaffold6806 |
69800 |
69863 |
+ |
Gypsy-45_BD-I |
LTR/Gypsy |
| scaffold6806 |
70036 |
70126 |
+ |
Gypsy-33_ST-I |
LTR/Gypsy |
| scaffold6806 |
72110 |
72396 |
+ |
Gypsy-5_PD-I |
LTR/Gypsy |
| scaffold6806 |
72771 |
72834 |
+ |
Gypsy-5_PD-I |
LTR/Gypsy |
| scaffold6806 |
72978 |
73449 |
+ |
Gypsy-33_VV-I |
LTR/Gypsy |
| scaffold6806 |
73505 |
73955 |
+ |
Gypsy-33_VV-I |
LTR/Gypsy |
| scaffold6806 |
75714 |
75946 |
+ |
RS16 |
Unspecified |
| scaffold6806 |
76664 |
76722 |
- |
Gypsy-21_ST-I |
LTR/Gypsy |
| scaffold6806 |
76794 |
77077 |
- |
RS16 |
Unspecified |
| scaffold6806 |
80716 |
81141 |
- |
PL266 |
Unspecified |
| scaffold6806 |
82248 |
83671 |
- |
RS1496 |
Unspecified |
| scaffold6806 |
83142 |
84771 |
+ |
RS658 |
Unspecified |
| scaffold6806 |
85431 |
85904 |
+ |
DIASPORA_I-int |
LTR/Gypsy |
| scaffold6806 |
85900 |
86204 |
- |
RS1149 |
Unspecified |
| scaffold6806 |
86391 |
87006 |
- |
Gypsy-9_EPa-I |
LTR/Gypsy |
| scaffold6806 |
86970 |
87006 |
- |
Gypsy-9_EPa-I |
LTR/Gypsy |
| scaffold6806 |
87229 |
87633 |
+ |
DIASPORA_I-int |
LTR/Gypsy |
| scaffold6806 |
87754 |
87952 |
+ |
DIASPORA_I-int |
LTR/Gypsy |
| scaffold6806 |
88226 |
90011 |
+ |
DIASPORA_I-int |
LTR/Gypsy |
| scaffold6806 |
90127 |
90164 |
+ |
A-rich |
Low_complexity |
| scaffold6806 |
90742 |
90824 |
+ |
Gypsy-9_EPa-I |
LTR/Gypsy |
| scaffold6806 |
90742 |
91254 |
+ |
Gypsy-9_EPa-I |
LTR/Gypsy |
| scaffold6806 |
90794 |
91254 |
+ |
PL266 |
Unspecified |
| scaffold6806 |
91045 |
91546 |
- |
PL202 |
Unspecified |
| scaffold6806 |
91165 |
91672 |
+ |
RS3805 |
Unspecified |
| scaffold6806 |
92904 |
93753 |
- |
RS599 |
Unspecified |
| scaffold6806 |
93765 |
94439 |
- |
PL678 |
Unspecified |
| scaffold6806 |
94623 |
94674 |
- |
Copia25-PTR_I-int |
LTR/Copia |
| scaffold6806 |
95254 |
96403 |
- |
Copia25-PTR_I-int |
LTR/Copia |
| scaffold6806 |
97780 |
97907 |
- |
Copia-10_BD-I |
LTR/Copia |
| scaffold6806 |
97906 |
98826 |
+ |
PL526 |
Unspecified |
| scaffold6806 |
97907 |
98968 |
- |
RS494 |
Unspecified |
| scaffold6806 |
99142 |
99204 |
+ |
(TTGACC)n |
Simple_repeat |
| scaffold6806 |
99326 |
99380 |
- |
ATHILA-4_SBi-I |
LTR/Gypsy |
| scaffold6806 |
99503 |
99683 |
+ |
RS5879 |
Unspecified |
| scaffold6806 |
99716 |
99755 |
+ |
RS5879 |
Unspecified |