scaffold6838 Repeat List
genome |
start |
end |
strand |
repeat-name |
repeat-class |
scaffold6838 |
1 |
2387 |
- |
RS869 |
Unspecified |
scaffold6838 |
1800 |
2725 |
- |
RS1007 |
Unspecified |
scaffold6838 |
2591 |
3575 |
+ |
RS105 |
Unspecified |
scaffold6838 |
3575 |
3868 |
+ |
PL904 |
Unspecified |
scaffold6838 |
3859 |
5671 |
+ |
RS105 |
Unspecified |
scaffold6838 |
4087 |
5824 |
+ |
RS200 |
Unspecified |
scaffold6838 |
5829 |
6816 |
+ |
RS200 |
Unspecified |
scaffold6838 |
13034 |
13198 |
+ |
PL816 |
Unspecified |
scaffold6838 |
13189 |
13712 |
+ |
RS1025 |
Unspecified |
scaffold6838 |
13742 |
13850 |
+ |
A-rich |
Low_complexity |
scaffold6838 |
15653 |
15831 |
- |
RS7154 |
Unspecified |
scaffold6838 |
17259 |
17624 |
- |
RS869 |
Unspecified |
scaffold6838 |
17637 |
18515 |
- |
TY1_Copia |
TY1_Copia(TransposonPSI) |
scaffold6838 |
18072 |
18104 |
- |
Copia1-VV_I-int |
LTR/Copia |
scaffold6838 |
18291 |
19202 |
- |
TY1_Copia |
TY1_Copia(TransposonPSI) |
scaffold6838 |
19426 |
19849 |
+ |
PL598 |
Unspecified |
scaffold6838 |
20174 |
20221 |
+ |
(TAGTAA)n |
Simple_repeat |
scaffold6838 |
20253 |
20334 |
+ |
(GAACT)n |
Simple_repeat |
scaffold6838 |
21361 |
21442 |
+ |
(TTGGAA)n |
Simple_repeat |
scaffold6838 |
21745 |
21860 |
+ |
(TTCAGAAAAC)n |
Simple_repeat |
scaffold6838 |
21879 |
22131 |
- |
PL298 |
Unspecified |
scaffold6838 |
22136 |
22164 |
+ |
(TTG)n |
Simple_repeat |
scaffold6838 |
22350 |
22491 |
+ |
(TAA)n |
Simple_repeat |
scaffold6838 |
24270 |
24622 |
+ |
RS510 |
Unspecified |
scaffold6838 |
26174 |
26221 |
+ |
A-rich |
Low_complexity |
scaffold6838 |
26532 |
26576 |
+ |
(ACATT)n |
Simple_repeat |
scaffold6838 |
27627 |
27729 |
+ |
(ACA)n |
Simple_repeat |
scaffold6838 |
27726 |
28556 |
+ |
RS211 |
Unspecified |
scaffold6838 |
28564 |
28885 |
- |
RS5216 |
Unspecified |
scaffold6838 |
30879 |
32200 |
- |
RIRE1_I-int |
LTR/Copia |
scaffold6838 |
32265 |
32415 |
- |
RIRE1_I-int |
LTR/Copia |
scaffold6838 |
32411 |
33484 |
- |
RIRE1_I-int |
LTR/Copia |
scaffold6838 |
34207 |
34244 |
+ |
(ATAAGC)n |
Simple_repeat |
scaffold6838 |
34905 |
34931 |
+ |
(ATAAA)n |
Simple_repeat |
scaffold6838 |
37562 |
38958 |
- |
Gypsy22-ZM_I-int |
LTR/Gypsy |
scaffold6838 |
39173 |
39694 |
- |
Gypsy22-ZM_I-int |
LTR/Gypsy |
scaffold6838 |
40097 |
40114 |
+ |
(A)n |
Simple_repeat |
scaffold6838 |
44603 |
44631 |
+ |
(TGAAC)n |
Simple_repeat |
scaffold6838 |
45930 |
45984 |
+ |
A-rich |
Low_complexity |
scaffold6838 |
46386 |
46424 |
+ |
(TATTTTT)n |
Simple_repeat |
scaffold6838 |
46488 |
46660 |
- |
RS204 |
Unspecified |
scaffold6838 |
46621 |
46676 |
+ |
PL322 |
Unspecified |
scaffold6838 |
47388 |
47437 |
+ |
A-rich |
Low_complexity |
scaffold6838 |
47826 |
47900 |
+ |
(CAACT)n |
Simple_repeat |
scaffold6838 |
48272 |
48847 |
- |
RS363 |
Unspecified |
scaffold6838 |
48852 |
49467 |
- |
RS363 |
Unspecified |
scaffold6838 |
49990 |
50145 |
+ |
PL175 |
Unspecified |
scaffold6838 |
51465 |
51717 |
- |
PL86 |
Unspecified |
scaffold6838 |
53324 |
53919 |
+ |
RS405 |
Unspecified |
scaffold6838 |
53396 |
54090 |
+ |
RS211 |
Unspecified |
scaffold6838 |
54097 |
55321 |
- |
RS398 |
Unspecified |
scaffold6838 |
55322 |
56250 |
+ |
RS1460 |
Unspecified |
scaffold6838 |
56253 |
57301 |
- |
RS869 |
Unspecified |
scaffold6838 |
56788 |
57377 |
+ |
PL933 |
Unspecified |
scaffold6838 |
58154 |
58183 |
+ |
(CCG)n |
Simple_repeat |
scaffold6838 |
60395 |
60454 |
+ |
Gypsy-53_GM-I |
LTR/Gypsy |
scaffold6838 |
61500 |
62757 |
+ |
Gypsy-53_GM-I |
LTR/Gypsy |
scaffold6838 |
62920 |
63275 |
+ |
Gypsy-I_MT |
LTR/Gypsy |
scaffold6838 |
63601 |
63930 |
+ |
Gypsy-I_MT |
LTR/Gypsy |
scaffold6838 |
64145 |
64179 |
+ |
(GCTTT)n |
Simple_repeat |
scaffold6838 |
65377 |
65436 |
+ |
(TAT)n |
Simple_repeat |
scaffold6838 |
65683 |
66345 |
- |
RS7491 |
Unspecified |
scaffold6838 |
66349 |
67529 |
- |
RS645 |
Unspecified |
scaffold6838 |
66950 |
68439 |
+ |
PL816 |
Unspecified |
scaffold6838 |
68343 |
69908 |
- |
RIRE1_I-int |
LTR/Copia |
scaffold6838 |
70023 |
71387 |
- |
RIRE1_I-int |
LTR/Copia |
scaffold6838 |
72535 |
72569 |
+ |
(AACA)n |
Simple_repeat |
scaffold6838 |
73543 |
73579 |
+ |
A-rich |
Low_complexity |
scaffold6838 |
76074 |
76283 |
- |
Copia-13_SB-I |
LTR/Copia |
scaffold6838 |
76293 |
76349 |
+ |
(TTAA)n |
Simple_repeat |
scaffold6838 |
76869 |
76906 |
+ |
(TTCA)n |
Simple_repeat |
scaffold6838 |
76992 |
77029 |
+ |
(AAC)n |
Simple_repeat |
scaffold6838 |
77030 |
77267 |
+ |
(AAT)n |
Simple_repeat |
scaffold6838 |
77268 |
77347 |
+ |
(AAC)n |
Simple_repeat |
scaffold6838 |
77493 |
78212 |
+ |
RS387 |
Unspecified |
scaffold6838 |
79858 |
79920 |
+ |
(CTCGA)n |
Simple_repeat |
scaffold6838 |
82090 |
82173 |
+ |
Gypsy-29_VV-I |
LTR/Gypsy |
scaffold6838 |
82270 |
82292 |
+ |
(GAA)n |
Simple_repeat |
scaffold6838 |
85927 |
86439 |
+ |
GYPSY3-I_MT |
LTR/Gypsy |
scaffold6838 |
86508 |
87988 |
- |
PL888 |
Unspecified |
scaffold6838 |
87048 |
88488 |
+ |
PL554 |
Unspecified |
scaffold6838 |
88027 |
88845 |
+ |
PL921 |
Unspecified |
scaffold6838 |
88254 |
89366 |
+ |
RS3063 |
Unspecified |
scaffold6838 |
89310 |
91191 |
- |
RS2918 |
Unspecified |
scaffold6838 |
91406 |
91454 |
+ |
(ACAT)n |
Simple_repeat |
scaffold6838 |
91455 |
91498 |
+ |
(ATACACAT)n |
Simple_repeat |
scaffold6838 |
91777 |
92876 |
+ |
RS3815 |
Unspecified |
scaffold6838 |
92170 |
93957 |
- |
RS430 |
Unspecified |
scaffold6838 |
92732 |
94200 |
+ |
RS254 |
Unspecified |
scaffold6838 |
94194 |
94650 |
- |
PL175 |
Unspecified |
scaffold6838 |
94774 |
94812 |
+ |
(TTTCGA)n |
Simple_repeat |
scaffold6838 |
95186 |
95554 |
- |
PL369 |
Unspecified |
scaffold6838 |
95553 |
96015 |
+ |
PL352 |
Unspecified |
scaffold6838 |
96013 |
96092 |
- |
PL344 |
Unspecified |
scaffold6838 |
97159 |
97257 |
+ |
A-rich |
Low_complexity |
scaffold6838 |
97517 |
97959 |
+ |
PL874 |
Unspecified |
scaffold6838 |
98491 |
98540 |
+ |
A-rich |
Low_complexity |
scaffold6838 |
98845 |
98885 |
+ |
(ATTAAGA)n |
Simple_repeat |
scaffold6838 |
98980 |
99463 |
+ |
RS403 |
Unspecified |
scaffold6838 |
99061 |
99575 |
- |
RS57 |
Unspecified |
scaffold6838 |
99574 |
99686 |
- |
RS427 |
Unspecified |
scaffold6838 |
100107 |
100136 |
+ |
(TTTCAC)n |
Simple_repeat |
scaffold6838 |
100713 |
100792 |
+ |
(CTT)n |
Simple_repeat |
scaffold6838 |
100901 |
101339 |
+ |
PL494 |
Unspecified |
scaffold6838 |
101525 |
101605 |
+ |
A-rich |
Low_complexity |
scaffold6838 |
102012 |
102086 |
+ |
A-rich |
Low_complexity |