scaffold6991 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold6991 |
1936 |
1968 |
+ |
(ATTTTC)n |
Simple_repeat |
| scaffold6991 |
3444 |
3482 |
+ |
(ATT)n |
Simple_repeat |
| scaffold6991 |
3752 |
3801 |
+ |
(TAGAT)n |
Simple_repeat |
| scaffold6991 |
3752 |
3876 |
+ |
(TAGAT)n |
Simple_repeat |
| scaffold6991 |
3779 |
3876 |
- |
RS2496 |
Unspecified |
| scaffold6991 |
4208 |
4483 |
+ |
RS17600 |
Unspecified |
| scaffold6991 |
5795 |
5976 |
+ |
RS79 |
Unspecified |
| scaffold6991 |
6039 |
6056 |
+ |
(T)n |
Simple_repeat |
| scaffold6991 |
8414 |
8453 |
+ |
(ACAACG)n |
Simple_repeat |
| scaffold6991 |
8735 |
8753 |
+ |
(A)n |
Simple_repeat |
| scaffold6991 |
9540 |
9587 |
+ |
(CTATTA)n |
Simple_repeat |
| scaffold6991 |
9571 |
9620 |
+ |
(GTTATC)n |
Simple_repeat |
| scaffold6991 |
10178 |
10197 |
+ |
(A)n |
Simple_repeat |
| scaffold6991 |
10714 |
10739 |
+ |
(TGTAT)n |
Simple_repeat |
| scaffold6991 |
10786 |
10829 |
+ |
(GT)n |
Simple_repeat |
| scaffold6991 |
11169 |
11242 |
- |
RS2339 |
Unspecified |
| scaffold6991 |
11590 |
11691 |
- |
RS15534 |
Unspecified |
| scaffold6991 |
11603 |
12054 |
+ |
PL133 |
Unspecified |
| scaffold6991 |
12142 |
12233 |
- |
RS2339 |
Unspecified |
| scaffold6991 |
12213 |
12509 |
+ |
RS202 |
Unspecified |
| scaffold6991 |
12720 |
13109 |
+ |
RS1010 |
Unspecified |
| scaffold6991 |
13029 |
13149 |
- |
RS1010 |
Unspecified |
| scaffold6991 |
13200 |
13247 |
+ |
(TAA)n |
Simple_repeat |
| scaffold6991 |
15764 |
15790 |
+ |
(T)n |
Simple_repeat |
| scaffold6991 |
16428 |
16671 |
- |
RS581 |
Unspecified |
| scaffold6991 |
16745 |
16844 |
- |
RS8546 |
Unspecified |
| scaffold6991 |
16848 |
17017 |
+ |
PL9 |
Unspecified |
| scaffold6991 |
16874 |
17176 |
+ |
PL9 |
Unspecified |
| scaffold6991 |
17180 |
17378 |
- |
RS757 |
Unspecified |
| scaffold6991 |
17180 |
17443 |
+ |
RS68 |
Unspecified |
| scaffold6991 |
17213 |
17446 |
+ |
RS13348 |
Unspecified |
| scaffold6991 |
17837 |
17871 |
+ |
A-rich |
Low_complexity |
| scaffold6991 |
18537 |
18632 |
+ |
(AACTG)n |
Simple_repeat |
| scaffold6991 |
18672 |
18786 |
+ |
(CTGAA)n |
Simple_repeat |
| scaffold6991 |
19683 |
19718 |
+ |
A-rich |
Low_complexity |
| scaffold6991 |
20194 |
20240 |
+ |
(ATAT)n |
Simple_repeat |
| scaffold6991 |
20918 |
21133 |
- |
Copia-3_PTri-I |
LTR/Copia |
| scaffold6991 |
21267 |
21603 |
- |
RS600 |
Unspecified |
| scaffold6991 |
21467 |
21626 |
- |
RS55 |
Unspecified |
| scaffold6991 |
21722 |
21789 |
+ |
(ATGCA)n |
Simple_repeat |
| scaffold6991 |
21759 |
21790 |
+ |
(ATGC)n |
Simple_repeat |
| scaffold6991 |
21823 |
21846 |
+ |
(GACT)n |
Simple_repeat |
| scaffold6991 |
21873 |
21907 |
+ |
(GTGGTC)n |
Simple_repeat |
| scaffold6991 |
22110 |
22234 |
+ |
RS581 |
Unspecified |
| scaffold6991 |
22477 |
22509 |
+ |
A-rich |
Low_complexity |
| scaffold6991 |
22724 |
22923 |
- |
RS414 |
Unspecified |
| scaffold6991 |
22925 |
23061 |
- |
RS1172 |
Unspecified |
| scaffold6991 |
24468 |
24690 |
+ |
RS549 |
Unspecified |
| scaffold6991 |
25423 |
25524 |
+ |
(TAATTA)n |
Simple_repeat |
| scaffold6991 |
26003 |
26120 |
+ |
RS6320 |
Unspecified |
| scaffold6991 |
26029 |
26118 |
- |
RS16382 |
Unspecified |
| scaffold6991 |
26035 |
26129 |
- |
PL436 |
Unspecified |
| scaffold6991 |
26433 |
26464 |
+ |
(A)n |
Simple_repeat |
| scaffold6991 |
26623 |
26688 |
- |
RS240 |
Unspecified |
| scaffold6991 |
26686 |
27338 |
- |
PL466 |
Unspecified |
| scaffold6991 |
27334 |
27520 |
- |
RS240 |
Unspecified |
| scaffold6991 |
27521 |
27540 |
+ |
(AT)n |
Simple_repeat |
| scaffold6991 |
27674 |
27702 |
+ |
(T)n |
Simple_repeat |
| scaffold6991 |
28492 |
28527 |
+ |
(A)n |
Simple_repeat |
| scaffold6991 |
28647 |
28828 |
+ |
RS17573 |
Unspecified |
| scaffold6991 |
29183 |
29596 |
- |
PL3 |
Unspecified |
| scaffold6991 |
29386 |
29850 |
- |
RS1633 |
Unspecified |
| scaffold6991 |
29598 |
29622 |
+ |
(T)n |
Simple_repeat |
| scaffold6991 |
30011 |
30071 |
+ |
RS356 |
Unspecified |
| scaffold6991 |
31671 |
31946 |
+ |
RS2291 |
Unspecified |
| scaffold6991 |
31974 |
32049 |
+ |
RS16888 |
Unspecified |
| scaffold6991 |
31979 |
32061 |
- |
RS18371 |
Unspecified |
| scaffold6991 |
33467 |
33906 |
+ |
PL211 |
Unspecified |
| scaffold6991 |
34031 |
34583 |
+ |
Copia-1_EPa-I |
LTR/Copia |
| scaffold6991 |
34714 |
34792 |
+ |
Copia-1_EPa-I |
LTR/Copia |
| scaffold6991 |
34945 |
36189 |
+ |
ATCopia26I |
LTR/Copia |
| scaffold6991 |
36517 |
37128 |
+ |
Copia-1_EPa-I |
LTR/Copia |
| scaffold6991 |
36517 |
37065 |
+ |
Copia-1_EPa-I |
LTR/Copia |
| scaffold6991 |
37026 |
37128 |
- |
RS84 |
Unspecified |
| scaffold6991 |
37514 |
37624 |
- |
RS2696 |
Unspecified |
| scaffold6991 |
38138 |
38422 |
- |
LTR2-ZM_LTR |
LTR |
| scaffold6991 |
39274 |
39299 |
+ |
(ATCT)n |
Simple_repeat |
| scaffold6991 |
39297 |
39931 |
+ |
RS592 |
Unspecified |
| scaffold6991 |
40259 |
40489 |
+ |
Copia-15_Mad-I |
LTR/Copia |
| scaffold6991 |
40259 |
40609 |
+ |
Copia-15_Mad-I |
LTR/Copia |
| scaffold6991 |
40474 |
40609 |
+ |
RS16888 |
Unspecified |
| scaffold6991 |
40780 |
40803 |
+ |
(T)n |
Simple_repeat |
| scaffold6991 |
40855 |
40878 |
+ |
(T)n |
Simple_repeat |
| scaffold6991 |
40927 |
41008 |
+ |
RS2291 |
Unspecified |
| scaffold6991 |
41009 |
41156 |
- |
RS1200 |
Unspecified |
| scaffold6991 |
46966 |
47044 |
+ |
RS17 |
Unspecified |
| scaffold6991 |
47133 |
47296 |
+ |
RS1362 |
Unspecified |
| scaffold6991 |
47295 |
47578 |
- |
RS1436 |
Unspecified |
| scaffold6991 |
47688 |
47818 |
+ |
RS128 |
Unspecified |
| scaffold6991 |
47846 |
47889 |
- |
RS128 |
Unspecified |
| scaffold6991 |
53968 |
54049 |
+ |
A-rich |
Low_complexity |
| scaffold6991 |
54872 |
55261 |
- |
PL701 |
Unspecified |
| scaffold6991 |
56620 |
56653 |
+ |
(ATTTTA)n |
Simple_repeat |
| scaffold6991 |
59091 |
59184 |
+ |
(TTTAG)n |
Simple_repeat |
| scaffold6991 |
59295 |
59330 |
+ |
(TGATTAG)n |
Simple_repeat |
| scaffold6991 |
59793 |
59837 |
+ |
(TTATATT)n |
Simple_repeat |
| scaffold6991 |
60101 |
60119 |
+ |
(TAA)n |
Simple_repeat |
| scaffold6991 |
60431 |
60604 |
+ |
RS822 |
Unspecified |
| scaffold6991 |
60811 |
60837 |
+ |
(TAA)n |
Simple_repeat |
| scaffold6991 |
60840 |
61232 |
+ |
RS29 |
Unspecified |
| scaffold6991 |
61922 |
62115 |
- |
PL700 |
Unspecified |
| scaffold6991 |
62590 |
62661 |
- |
RS18111 |
Unspecified |
| scaffold6991 |
63244 |
63280 |
+ |
(GTAT)n |
Simple_repeat |
| scaffold6991 |
64796 |
64825 |
+ |
(T)n |
Simple_repeat |
| scaffold6991 |
65994 |
66033 |
+ |
(CCATAT)n |
Simple_repeat |
| scaffold6991 |
66550 |
66587 |
+ |
(ATCCAT)n |
Simple_repeat |
| scaffold6991 |
66863 |
67146 |
- |
LTR2-ZM_LTR |
LTR |
| scaffold6991 |
69491 |
69517 |
+ |
(T)n |
Simple_repeat |
| scaffold6991 |
70360 |
70428 |
+ |
A-rich |
Low_complexity |
| scaffold6991 |
72301 |
72324 |
+ |
(T)n |
Simple_repeat |