scaffold7042 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold7042 |
1 |
89 |
+ |
(TTG)n |
Simple_repeat |
| scaffold7042 |
197 |
275 |
+ |
(TGT)n |
Simple_repeat |
| scaffold7042 |
553 |
654 |
- |
RS279 |
Unspecified |
| scaffold7042 |
881 |
992 |
- |
Gypsy-3_PD-I |
LTR/Gypsy |
| scaffold7042 |
961 |
998 |
- |
DIASPORA_I-int |
LTR/Gypsy |
| scaffold7042 |
1651 |
1699 |
+ |
(T)n |
Simple_repeat |
| scaffold7042 |
1760 |
1791 |
+ |
(TGTAT)n |
Simple_repeat |
| scaffold7042 |
2599 |
2678 |
+ |
(TTA)n |
Simple_repeat |
| scaffold7042 |
2806 |
2843 |
+ |
(TTATA)n |
Simple_repeat |
| scaffold7042 |
3005 |
3177 |
+ |
RS3555 |
Unspecified |
| scaffold7042 |
4138 |
4228 |
+ |
(ATTTGAA)n |
Simple_repeat |
| scaffold7042 |
4298 |
4480 |
- |
RS12927 |
Unspecified |
| scaffold7042 |
4480 |
4645 |
+ |
RS13111 |
Unspecified |
| scaffold7042 |
4848 |
4885 |
+ |
(GAATTGA)n |
Simple_repeat |
| scaffold7042 |
4848 |
5097 |
+ |
(GAATTGA)n |
Simple_repeat |
| scaffold7042 |
4870 |
5097 |
+ |
RS9996 |
Unspecified |
| scaffold7042 |
5941 |
6110 |
+ |
RS13111 |
Unspecified |
| scaffold7042 |
6313 |
6562 |
+ |
(GAATTGA)n |
Simple_repeat |
| scaffold7042 |
6313 |
6350 |
+ |
(GAATTGA)n |
Simple_repeat |
| scaffold7042 |
6335 |
6562 |
+ |
RS9996 |
Unspecified |
| scaffold7042 |
11352 |
11516 |
+ |
(CTG)n |
Simple_repeat |
| scaffold7042 |
12563 |
12604 |
- |
RS2462 |
Unspecified |
| scaffold7042 |
12607 |
12783 |
+ |
RS3555 |
Unspecified |
| scaffold7042 |
13766 |
13856 |
+ |
(ATTTGAA)n |
Simple_repeat |
| scaffold7042 |
13926 |
14108 |
- |
RS12927 |
Unspecified |
| scaffold7042 |
14350 |
14518 |
- |
RS11216 |
Unspecified |
| scaffold7042 |
14850 |
14878 |
+ |
(ATTTTTA)n |
Simple_repeat |
| scaffold7042 |
16798 |
16892 |
+ |
(ACC)n |
Simple_repeat |
| scaffold7042 |
16903 |
16967 |
+ |
A-rich |
Low_complexity |
| scaffold7042 |
17077 |
17245 |
+ |
RS11780 |
Unspecified |
| scaffold7042 |
17095 |
17417 |
+ |
RS3948 |
Unspecified |
| scaffold7042 |
17311 |
17486 |
+ |
RS2767 |
Unspecified |
| scaffold7042 |
17491 |
17529 |
+ |
(AATTGTT)n |
Simple_repeat |
| scaffold7042 |
18012 |
18072 |
- |
HAT-14_Mad |
DNA/hAT-Tip100 |
| scaffold7042 |
18371 |
18402 |
+ |
(T)n |
Simple_repeat |
| scaffold7042 |
19407 |
19434 |
+ |
(AAGCA)n |
Simple_repeat |
| scaffold7042 |
22504 |
22641 |
+ |
Gypsy-72-LTR_ZM |
LTR/Gypsy |
| scaffold7042 |
23181 |
23241 |
+ |
(TATT)n |
Simple_repeat |
| scaffold7042 |
23659 |
23698 |
+ |
(TATTTT)n |
Simple_repeat |
| scaffold7042 |
23754 |
23828 |
+ |
(AATAAC)n |
Simple_repeat |
| scaffold7042 |
23942 |
23975 |
+ |
A-rich |
Low_complexity |
| scaffold7042 |
24127 |
24458 |
+ |
RS1318 |
Unspecified |
| scaffold7042 |
24168 |
24461 |
+ |
PL939 |
Unspecified |
| scaffold7042 |
24608 |
24669 |
+ |
(GAAGAT)n |
Simple_repeat |
| scaffold7042 |
24719 |
24799 |
+ |
(GTGTTT)n |
Simple_repeat |
| scaffold7042 |
25061 |
25106 |
+ |
A-rich |
Low_complexity |
| scaffold7042 |
25459 |
25553 |
+ |
(TGTAAT)n |
Simple_repeat |
| scaffold7042 |
25804 |
25862 |
+ |
A-rich |
Low_complexity |
| scaffold7042 |
27083 |
27125 |
+ |
A-rich |
Low_complexity |
| scaffold7042 |
27596 |
28257 |
- |
MEGY-I_MT |
LTR/Gypsy |
| scaffold7042 |
28712 |
28845 |
- |
MEGY-I_MT |
LTR/Gypsy |
| scaffold7042 |
28917 |
28968 |
- |
Gypsy-39_PT-I |
LTR/Gypsy |
| scaffold7042 |
29490 |
29520 |
- |
Gypsy-16_Mad-I |
LTR/Gypsy |
| scaffold7042 |
30638 |
30696 |
+ |
(TTGACC)n |
Simple_repeat |
| scaffold7042 |
31184 |
31470 |
- |
TA11 |
LINE/L1 |
| scaffold7042 |
31439 |
31518 |
- |
L1-8_Mad |
LINE/L1 |
| scaffold7042 |
31680 |
32538 |
- |
SHALINE10_MT |
LINE/L1 |
| scaffold7042 |
32783 |
32853 |
- |
LINE1-17_ZM |
LINE/L1 |
| scaffold7042 |
35248 |
36512 |
- |
RS616 |
Unspecified |
| scaffold7042 |
36571 |
36873 |
+ |
RS9138 |
Unspecified |
| scaffold7042 |
37534 |
37586 |
+ |
(TAT)n |
Simple_repeat |
| scaffold7042 |
37723 |
37758 |
+ |
(T)n |
Simple_repeat |
| scaffold7042 |
37913 |
38049 |
- |
RS11560 |
Unspecified |
| scaffold7042 |
38014 |
38184 |
+ |
RS11831 |
Unspecified |
| scaffold7042 |
38063 |
38563 |
+ |
RS486 |
Unspecified |
| scaffold7042 |
40098 |
40165 |
+ |
(TTGTTCT)n |
Simple_repeat |
| scaffold7042 |
41483 |
41622 |
+ |
GYPSHAN_I_MT-int |
LTR/Gypsy |
| scaffold7042 |
41854 |
42486 |
- |
RS1207 |
Unspecified |
| scaffold7042 |
41949 |
42586 |
- |
RS661 |
Unspecified |
| scaffold7042 |
42144 |
42678 |
- |
RS1930 |
Unspecified |
| scaffold7042 |
42785 |
43337 |
+ |
Gypsy1-PTR_I-int |
LTR/Gypsy |
| scaffold7042 |
43614 |
43639 |
+ |
(AAATT)n |
Simple_repeat |
| scaffold7042 |
44690 |
44746 |
+ |
(ATTGTG)n |
Simple_repeat |
| scaffold7042 |
45125 |
45218 |
+ |
(ATTGATT)n |
Simple_repeat |
| scaffold7042 |
45329 |
45510 |
+ |
RS1066 |
Unspecified |
| scaffold7042 |
46457 |
46504 |
+ |
GYPOT1_I-int |
LTR/Gypsy |
| scaffold7042 |
46471 |
46517 |
+ |
Gypsy-28_Mad-I |
LTR/Gypsy |
| scaffold7042 |
46666 |
46760 |
+ |
(TAA)n |
Simple_repeat |
| scaffold7042 |
47139 |
47411 |
+ |
RS689 |
Unspecified |
| scaffold7042 |
47664 |
48449 |
+ |
gypsy |
gypsy(TransposonPSI) |
| scaffold7042 |
48459 |
48504 |
+ |
GYPOT1_I-int |
LTR/Gypsy |
| scaffold7042 |
48785 |
48810 |
+ |
(AAATT)n |
Simple_repeat |
| scaffold7042 |
50653 |
50738 |
+ |
(ATTATA)n |
Simple_repeat |
| scaffold7042 |
51364 |
51409 |
- |
Copia25-PTR_I-int |
LTR/Copia |
| scaffold7042 |
52037 |
53532 |
- |
Copia-10_BD-I |
LTR/Copia |
| scaffold7042 |
53750 |
55008 |
- |
Copia25-PTR_I-int |
LTR/Copia |
| scaffold7042 |
56187 |
56221 |
+ |
A-rich |
Low_complexity |
| scaffold7042 |
56970 |
57385 |
+ |
PL475 |
Unspecified |
| scaffold7042 |
57421 |
57439 |
+ |
(T)n |
Simple_repeat |
| scaffold7042 |
57857 |
58564 |
- |
PL678 |
Unspecified |
| scaffold7042 |
58565 |
58798 |
- |
PL678 |
Unspecified |
| scaffold7042 |
59072 |
59122 |
+ |
(GCTTT)n |
Simple_repeat |
| scaffold7042 |
59686 |
59722 |
+ |
(GCTTGT)n |
Simple_repeat |
| scaffold7042 |
59922 |
59940 |
+ |
(GTT)n |
Simple_repeat |
| scaffold7042 |
61265 |
61332 |
+ |
(TTGTTCT)n |
Simple_repeat |
| scaffold7042 |
63699 |
63730 |
+ |
(AAAT)n |
Simple_repeat |
| scaffold7042 |
64083 |
64117 |
+ |
(T)n |
Simple_repeat |
| scaffold7042 |
64308 |
64347 |
+ |
(ATATCGG)n |
Simple_repeat |
| scaffold7042 |
64548 |
65007 |
- |
RS602 |
Unspecified |
| scaffold7042 |
65245 |
65307 |
+ |
(TTTATG)n |
Simple_repeat |
| scaffold7042 |
65627 |
65689 |
+ |
(TTTATG)n |
Simple_repeat |
| scaffold7042 |
66254 |
66617 |
+ |
PL670 |
Unspecified |
| scaffold7042 |
69596 |
71823 |
+ |
RS67 |
Unspecified |
| scaffold7042 |
72119 |
72264 |
+ |
(CTG)n |
Simple_repeat |
| scaffold7042 |
72266 |
72315 |
+ |
G-rich |
Low_complexity |
| scaffold7042 |
72330 |
72369 |
+ |
(GAGGCT)n |
Simple_repeat |
| scaffold7042 |
73991 |
74026 |
+ |
(TTCGTTT)n |
Simple_repeat |
| scaffold7042 |
74783 |
75262 |
+ |
PL388 |
Unspecified |
| scaffold7042 |
74873 |
75387 |
+ |
RS519 |
Unspecified |
| scaffold7042 |
75371 |
75443 |
+ |
RS398 |
Unspecified |