scaffold7307 Repeat List
genome |
start |
end |
strand |
repeat-name |
repeat-class |
scaffold7307 |
14 |
47 |
+ |
(T)n |
Simple_repeat |
scaffold7307 |
245 |
441 |
- |
RS7538 |
Unspecified |
scaffold7307 |
1518 |
1544 |
+ |
(TTTA)n |
Simple_repeat |
scaffold7307 |
2159 |
2182 |
+ |
(A)n |
Simple_repeat |
scaffold7307 |
2416 |
2457 |
+ |
A-rich |
Low_complexity |
scaffold7307 |
3205 |
3226 |
+ |
(A)n |
Simple_repeat |
scaffold7307 |
3374 |
3637 |
+ |
RS736 |
Unspecified |
scaffold7307 |
5856 |
5891 |
+ |
(T)n |
Simple_repeat |
scaffold7307 |
5892 |
5916 |
+ |
(TATT)n |
Simple_repeat |
scaffold7307 |
6261 |
6335 |
+ |
A-rich |
Low_complexity |
scaffold7307 |
6530 |
6554 |
+ |
(A)n |
Simple_repeat |
scaffold7307 |
7388 |
7421 |
+ |
(GGTCGT)n |
Simple_repeat |
scaffold7307 |
7990 |
8030 |
+ |
(ATGA)n |
Simple_repeat |
scaffold7307 |
8091 |
8124 |
+ |
GA-rich |
Low_complexity |
scaffold7307 |
8909 |
8940 |
+ |
(ATTTA)n |
Simple_repeat |
scaffold7307 |
9074 |
9494 |
+ |
PL400 |
Unspecified |
scaffold7307 |
9379 |
9513 |
- |
PL753 |
Unspecified |
scaffold7307 |
9545 |
9601 |
+ |
(TA)n |
Simple_repeat |
scaffold7307 |
12067 |
12092 |
+ |
(A)n |
Simple_repeat |
scaffold7307 |
12446 |
12503 |
+ |
(A)n |
Simple_repeat |
scaffold7307 |
14166 |
14200 |
+ |
(TTATTT)n |
Simple_repeat |
scaffold7307 |
14186 |
14233 |
+ |
GA-rich |
Low_complexity |
scaffold7307 |
14342 |
14378 |
+ |
A-rich |
Low_complexity |
scaffold7307 |
14488 |
14530 |
+ |
A-rich |
Low_complexity |
scaffold7307 |
14938 |
14998 |
+ |
(TTTA)n |
Simple_repeat |
scaffold7307 |
15502 |
15564 |
+ |
RS16604 |
Unspecified |
scaffold7307 |
16145 |
16243 |
+ |
(CAGTT)n |
Simple_repeat |
scaffold7307 |
16260 |
16325 |
+ |
(TTCAG)n |
Simple_repeat |
scaffold7307 |
16485 |
16671 |
+ |
RS38 |
Unspecified |
scaffold7307 |
16752 |
16845 |
- |
RS5121 |
Unspecified |
scaffold7307 |
16761 |
16823 |
+ |
RS4681 |
Unspecified |
scaffold7307 |
16880 |
16911 |
+ |
(TTATG)n |
Simple_repeat |
scaffold7307 |
17129 |
17163 |
+ |
(ATTTTG)n |
Simple_repeat |
scaffold7307 |
19694 |
19720 |
+ |
(T)n |
Simple_repeat |
scaffold7307 |
19958 |
20003 |
+ |
(T)n |
Simple_repeat |
scaffold7307 |
20822 |
21127 |
+ |
RS499 |
Unspecified |
scaffold7307 |
22331 |
22752 |
+ |
Gypsy-137_GM-I |
LTR/Gypsy |
scaffold7307 |
22757 |
22819 |
+ |
(TTTATTG)n |
Simple_repeat |
scaffold7307 |
22900 |
22927 |
+ |
A-rich |
Low_complexity |
scaffold7307 |
23191 |
23340 |
+ |
RS10743 |
Unspecified |
scaffold7307 |
23209 |
23379 |
- |
RS1031 |
Unspecified |
scaffold7307 |
24146 |
24202 |
+ |
A-rich |
Low_complexity |
scaffold7307 |
25163 |
25361 |
- |
PL324 |
Unspecified |
scaffold7307 |
26225 |
26400 |
+ |
RS8224 |
Unspecified |
scaffold7307 |
28257 |
28278 |
+ |
(T)n |
Simple_repeat |
scaffold7307 |
28655 |
28687 |
+ |
(T)n |
Simple_repeat |
scaffold7307 |
30071 |
30092 |
+ |
(T)n |
Simple_repeat |
scaffold7307 |
31677 |
31802 |
+ |
Copia-42_ST-I |
LTR/Copia |
scaffold7307 |
32997 |
33065 |
+ |
RS17865 |
Unspecified |
scaffold7307 |
33100 |
33275 |
+ |
RS8224 |
Unspecified |
scaffold7307 |
35014 |
35041 |
+ |
(T)n |
Simple_repeat |
scaffold7307 |
36447 |
36529 |
- |
HAT-N12_Mad |
DNA/hAT-Ac |
scaffold7307 |
36447 |
36644 |
- |
HAT-N12_Mad |
DNA/hAT-Ac |
scaffold7307 |
36520 |
36644 |
- |
RS1799 |
Unspecified |
scaffold7307 |
36645 |
36684 |
- |
RS1799 |
Unspecified |
scaffold7307 |
36703 |
36773 |
+ |
RS15694 |
Unspecified |
scaffold7307 |
37900 |
37981 |
- |
RS18 |
Unspecified |
scaffold7307 |
37942 |
38040 |
- |
RS18 |
Unspecified |
scaffold7307 |
38423 |
38695 |
- |
RS898 |
Unspecified |
scaffold7307 |
38579 |
38712 |
+ |
RS4042 |
Unspecified |
scaffold7307 |
38791 |
38829 |
+ |
(ACGGAC)n |
Simple_repeat |
scaffold7307 |
38932 |
39190 |
+ |
RS41 |
Unspecified |
scaffold7307 |
39253 |
39355 |
+ |
A-rich |
Low_complexity |
scaffold7307 |
39361 |
39392 |
+ |
(T)n |
Simple_repeat |
scaffold7307 |
39773 |
40246 |
- |
PL654 |
Unspecified |
scaffold7307 |
40503 |
40537 |
+ |
GA-rich |
Low_complexity |
scaffold7307 |
40538 |
40546 |
+ |
(AGATGA)n |
Simple_repeat |
scaffold7307 |
40601 |
40667 |
+ |
(TTAT)n |
Simple_repeat |
scaffold7307 |
40637 |
40668 |
+ |
(T)n |
Simple_repeat |
scaffold7307 |
41688 |
41865 |
- |
RS4 |
Unspecified |
scaffold7307 |
42560 |
42602 |
+ |
(ATAT)n |
Simple_repeat |
scaffold7307 |
42861 |
42926 |
+ |
(GATATT)n |
Simple_repeat |
scaffold7307 |
42948 |
43117 |
+ |
RS7915 |
Unspecified |
scaffold7307 |
44083 |
44215 |
- |
RS9486 |
Unspecified |
scaffold7307 |
44917 |
44960 |
+ |
(ATTTTG)n |
Simple_repeat |
scaffold7307 |
44961 |
44976 |
+ |
(TTATT)n |
Simple_repeat |
scaffold7307 |
45975 |
46207 |
+ |
RS829 |
Unspecified |
scaffold7307 |
46408 |
46647 |
- |
RS11096 |
Unspecified |
scaffold7307 |
46944 |
46975 |
+ |
(TTCA)n |
Simple_repeat |
scaffold7307 |
47658 |
47691 |
+ |
RS7915 |
Unspecified |
scaffold7307 |
47689 |
47787 |
+ |
RS7915 |
Unspecified |
scaffold7307 |
47844 |
47868 |
+ |
(T)n |
Simple_repeat |
scaffold7307 |
48987 |
49022 |
+ |
(TTTTA)n |
Simple_repeat |
scaffold7307 |
49173 |
49449 |
- |
RS12433 |
Unspecified |
scaffold7307 |
49587 |
49719 |
- |
RS9486 |
Unspecified |
scaffold7307 |
50235 |
50277 |
+ |
(TTTAT)n |
Simple_repeat |
scaffold7307 |
50324 |
50418 |
+ |
RS16382 |
Unspecified |
scaffold7307 |
50417 |
50534 |
+ |
RS11149 |
Unspecified |
scaffold7307 |
50566 |
51512 |
- |
RS7862 |
Unspecified |
scaffold7307 |
52180 |
52270 |
+ |
PL794 |
Unspecified |
scaffold7307 |
52192 |
52271 |
+ |
RS908 |
Unspecified |
scaffold7307 |
52284 |
52368 |
+ |
LTR-7_Mad-LTR |
LTR |
scaffold7307 |
52722 |
52806 |
+ |
LTR-7_Mad-LTR |
LTR |
scaffold7307 |
53162 |
53246 |
+ |
LTR-7_Mad-LTR |
LTR |
scaffold7307 |
53354 |
53740 |
- |
RS13707 |
Unspecified |
scaffold7307 |
53769 |
53924 |
- |
Gypsy-121_GM-I |
LTR/Gypsy |
scaffold7307 |
53930 |
54110 |
+ |
RS9797 |
Unspecified |
scaffold7307 |
54004 |
54197 |
+ |
RS14654 |
Unspecified |
scaffold7307 |
54389 |
54480 |
- |
LTR-7_Mad-LTR |
LTR |
scaffold7307 |
54540 |
54652 |
- |
RS18366 |
Unspecified |
scaffold7307 |
54692 |
55013 |
+ |
(AACTG)n |
Simple_repeat |
scaffold7307 |
55021 |
55320 |
- |
RS261 |
Unspecified |
scaffold7307 |
56504 |
56577 |
+ |
(TTTTTTA)n |
Simple_repeat |
scaffold7307 |
56621 |
56670 |
+ |
(AT)n |
Simple_repeat |
scaffold7307 |
58310 |
58364 |
+ |
(AGACCC)n |
Simple_repeat |
scaffold7307 |
58404 |
58433 |
+ |
(GGGTC)n |
Simple_repeat |
scaffold7307 |
58454 |
58612 |
- |
RS306 |
Unspecified |
scaffold7307 |
58606 |
58836 |
- |
RS306 |
Unspecified |
scaffold7307 |
59457 |
59498 |
+ |
(T)n |
Simple_repeat |
scaffold7307 |
59731 |
59941 |
- |
RS488 |
Unspecified |
scaffold7307 |
59944 |
59973 |
+ |
(TTATT)n |
Simple_repeat |
scaffold7307 |
60153 |
60369 |
- |
RS7655 |
Unspecified |
scaffold7307 |
61778 |
61804 |
+ |
(A)n |
Simple_repeat |
scaffold7307 |
63692 |
63720 |
+ |
(A)n |
Simple_repeat |
scaffold7307 |
63853 |
63877 |
+ |
(A)n |
Simple_repeat |
scaffold7307 |
65063 |
65166 |
- |
RS12449 |
Unspecified |
scaffold7307 |
65074 |
65165 |
+ |
RS4475 |
Unspecified |
scaffold7307 |
65074 |
65204 |
+ |
RS606 |
Unspecified |
scaffold7307 |
65532 |
65564 |
+ |
(ATA)n |
Simple_repeat |
scaffold7307 |
65659 |
65686 |
+ |
(T)n |
Simple_repeat |
scaffold7307 |
65750 |
65788 |
+ |
(TAA)n |
Simple_repeat |
scaffold7307 |
65919 |
66336 |
+ |
PL160 |
Unspecified |
scaffold7307 |
66712 |
67312 |
- |
PL757 |
Unspecified |
scaffold7307 |
67397 |
67481 |
+ |
A-rich |
Low_complexity |
scaffold7307 |
67705 |
67894 |
+ |
PL398 |
Unspecified |
scaffold7307 |
69122 |
69264 |
- |
PL719 |
Unspecified |
scaffold7307 |
69244 |
69315 |
- |
RS5574 |
Unspecified |
scaffold7307 |
69683 |
69782 |
+ |
RS4475 |
Unspecified |
scaffold7307 |
70386 |
70442 |
+ |
RS726 |
Unspecified |
scaffold7307 |
70414 |
70472 |
- |
RS726 |
Unspecified |
scaffold7307 |
70495 |
70688 |
+ |
RS5574 |
Unspecified |
scaffold7307 |
71307 |
71384 |
+ |
(TA)n |
Simple_repeat |
scaffold7307 |
71307 |
71543 |
+ |
(TA)n |
Simple_repeat |
scaffold7307 |
71366 |
71543 |
+ |
RS7915 |
Unspecified |
scaffold7307 |
71600 |
71617 |
+ |
(T)n |
Simple_repeat |
scaffold7307 |
71716 |
71763 |
+ |
(TTA)n |
Simple_repeat |
scaffold7307 |
72378 |
72416 |
+ |
(TGTTA)n |
Simple_repeat |
scaffold7307 |
72613 |
72646 |
+ |
(TTTAA)n |
Simple_repeat |
scaffold7307 |
72872 |
73150 |
- |
RS12433 |
Unspecified |
scaffold7307 |
73254 |
73674 |
- |
RS2034 |
Unspecified |
scaffold7307 |
73650 |
73681 |
- |
RS2034 |
Unspecified |
scaffold7307 |
73697 |
73829 |
- |
RS9486 |
Unspecified |
scaffold7307 |
74070 |
74130 |
+ |
A-rich |
Low_complexity |
scaffold7307 |
74500 |
74616 |
+ |
RS11149 |
Unspecified |
scaffold7307 |
74648 |
75627 |
- |
RS7862 |
Unspecified |
scaffold7307 |
75987 |
76165 |
- |
RS13961 |
Unspecified |
scaffold7307 |
77448 |
77537 |
- |
Copia-84_ST-I |
LTR/Copia |
scaffold7307 |
79660 |
79708 |
+ |
A-rich |
Low_complexity |
scaffold7307 |
81715 |
81775 |
+ |
A-rich |
Low_complexity |
scaffold7307 |
81845 |
82134 |
- |
RS12327 |
Unspecified |
scaffold7307 |
84226 |
84269 |
+ |
A-rich |
Low_complexity |
scaffold7307 |
87421 |
87443 |
+ |
(CTA)n |
Simple_repeat |
scaffold7307 |
87666 |
87700 |
+ |
(AATTTC)n |
Simple_repeat |
scaffold7307 |
88213 |
88422 |
- |
RS12936 |
Unspecified |
scaffold7307 |
89141 |
89205 |
+ |
A-rich |
Low_complexity |
scaffold7307 |
89399 |
89565 |
+ |
DS-RICE3N |
DNA/hAT-Ac |
scaffold7307 |
89566 |
89587 |
- |
ZhATN1_ZM |
DNA/hAT-Ac |
scaffold7307 |
89677 |
89736 |
+ |
(AATTTTT)n |
Simple_repeat |
scaffold7307 |
89751 |
89789 |
- |
hAT-N16_ZM |
DNA/hAT-Ac |
scaffold7307 |
89790 |
89829 |
+ |
(CTCGGG)n |
Simple_repeat |
scaffold7307 |
89830 |
89938 |
- |
hAT-N16_ZM |
DNA/hAT-Ac |
scaffold7307 |
90079 |
90130 |
- |
RS3921 |
Unspecified |
scaffold7307 |
90368 |
90407 |
+ |
(CAAAA)n |
Simple_repeat |
scaffold7307 |
90627 |
90684 |
+ |
HAT-14_Mad |
DNA/hAT-Tip100 |
scaffold7307 |
91195 |
91312 |
- |
Gypsy-13_SMo-LTR |
LTR/Gypsy |
scaffold7307 |
93126 |
93161 |
+ |
(ATTTC)n |
Simple_repeat |
scaffold7307 |
93180 |
93399 |
+ |
RS5410 |
Unspecified |
scaffold7307 |
93471 |
93496 |
+ |
(T)n |
Simple_repeat |
scaffold7307 |
94291 |
94348 |
+ |
(GGT)n |
Simple_repeat |
scaffold7307 |
94391 |
94547 |
+ |
(TGTTTG)n |
Simple_repeat |
scaffold7307 |
94609 |
94640 |
+ |
(T)n |
Simple_repeat |
scaffold7307 |
95365 |
95415 |
+ |
A-rich |
Low_complexity |
scaffold7307 |
95511 |
95766 |
+ |
RS1 |
Unspecified |
scaffold7307 |
95848 |
95885 |
+ |
(ATGACCT)n |
Simple_repeat |
scaffold7307 |
95922 |
96092 |
- |
RS5 |
Unspecified |
scaffold7307 |
96311 |
96349 |
+ |
(T)n |
Simple_repeat |
scaffold7307 |
96897 |
97019 |
- |
RS10049 |
Unspecified |
scaffold7307 |
97598 |
97748 |
- |
RS5357 |
Unspecified |
scaffold7307 |
97870 |
98176 |
- |
RS4357 |
Unspecified |
scaffold7307 |
97963 |
98273 |
- |
RS4703 |
Unspecified |
scaffold7307 |
98746 |
98876 |
- |
RS10049 |
Unspecified |
scaffold7307 |
98977 |
99062 |
+ |
RS1258 |
Unspecified |
scaffold7307 |
99083 |
99205 |
- |
RS8936 |
Unspecified |
scaffold7307 |
100117 |
100244 |
+ |
RS177 |
Unspecified |
scaffold7307 |
100866 |
100926 |
+ |
(A)n |
Simple_repeat |
scaffold7307 |
101516 |
101772 |
+ |
RS8745 |
Unspecified |
scaffold7307 |
102499 |
102729 |
- |
RS5357 |
Unspecified |
scaffold7307 |
102864 |
103184 |
- |
RS4357 |
Unspecified |
scaffold7307 |
102956 |
103289 |
- |
RS4703 |
Unspecified |
scaffold7307 |
103704 |
103765 |
- |
RS10049 |
Unspecified |
scaffold7307 |
103764 |
103805 |
+ |
A-rich |
Low_complexity |
scaffold7307 |
103845 |
103895 |
+ |
(AATATAT)n |
Simple_repeat |
scaffold7307 |
104106 |
104154 |
+ |
(ATTT)n |
Simple_repeat |
scaffold7307 |
104172 |
104373 |
+ |
RS2037 |
Unspecified |
scaffold7307 |
104648 |
104880 |
- |
RS5357 |
Unspecified |
scaffold7307 |
104995 |
105307 |
- |
RS4357 |
Unspecified |
scaffold7307 |
105087 |
105403 |
- |
RS4703 |
Unspecified |
scaffold7307 |
105831 |
106036 |
- |
RS10049 |
Unspecified |
scaffold7307 |
106149 |
106217 |
- |
RS727 |
Unspecified |
scaffold7307 |
106238 |
106360 |
- |
RS8936 |
Unspecified |
scaffold7307 |
106638 |
106666 |
+ |
(T)n |
Simple_repeat |
scaffold7307 |
106949 |
107176 |
- |
RS5357 |
Unspecified |
scaffold7307 |
107305 |
107613 |
- |
RS4357 |
Unspecified |
scaffold7307 |
107397 |
107710 |
- |
RS4703 |
Unspecified |
scaffold7307 |
108062 |
108261 |
- |
RS10049 |
Unspecified |
scaffold7307 |
108907 |
109034 |
- |
RS847 |
Unspecified |
scaffold7307 |
109899 |
110214 |
- |
RS4357 |
Unspecified |
scaffold7307 |
110000 |
110309 |
- |
RS4703 |
Unspecified |
scaffold7307 |
110333 |
110350 |
+ |
(T)n |
Simple_repeat |
scaffold7307 |
110595 |
110851 |
- |
RS1 |
Unspecified |
scaffold7307 |
110890 |
111092 |
- |
RS10049 |
Unspecified |
scaffold7307 |
111211 |
111333 |
- |
RS8936 |
Unspecified |
scaffold7307 |
112712 |
113336 |
+ |
RS11964 |
Unspecified |
scaffold7307 |
113370 |
113569 |
+ |
hAT-4_PTr |
DNA/hAT-Tip100 |
scaffold7307 |
114524 |
114832 |
- |
RS310 |
Unspecified |
scaffold7307 |
114676 |
114858 |
- |
RS479 |
Unspecified |
scaffold7307 |
115431 |
115534 |
- |
RS10501 |
Unspecified |
scaffold7307 |
115758 |
115845 |
+ |
(TACAATA)n |
Simple_repeat |
scaffold7307 |
115804 |
115857 |
+ |
(ACCATAA)n |
Simple_repeat |
scaffold7307 |
115946 |
116334 |
+ |
(AAT)n |
Simple_repeat |
scaffold7307 |
116301 |
116334 |
+ |
(AAT)n |
Simple_repeat |
scaffold7307 |
116425 |
116504 |
- |
RS13005 |
Unspecified |
scaffold7307 |
116535 |
116669 |
- |
RS11074 |
Unspecified |
scaffold7307 |
116966 |
116996 |
+ |
(ATGAA)n |
Simple_repeat |
scaffold7307 |
117238 |
117303 |
+ |
RS12357 |
Unspecified |
scaffold7307 |
117362 |
117430 |
- |
RS926 |
Unspecified |
scaffold7307 |
117445 |
117464 |
+ |
(T)n |
Simple_repeat |
scaffold7307 |
117517 |
117653 |
- |
RS14426 |
Unspecified |
scaffold7307 |
117840 |
118553 |
+ |
Copia-4_SL-LTR |
LTR/Copia |
scaffold7307 |
119049 |
119081 |
+ |
(TTCAA)n |
Simple_repeat |
scaffold7307 |
120714 |
120765 |
+ |
A-rich |
Low_complexity |
scaffold7307 |
120994 |
121017 |
+ |
(T)n |
Simple_repeat |
scaffold7307 |
121206 |
121229 |
+ |
(T)n |
Simple_repeat |
scaffold7307 |
121369 |
121443 |
+ |
RS8485 |
Unspecified |
scaffold7307 |
121401 |
121639 |
+ |
RS581 |
Unspecified |
scaffold7307 |
121653 |
121755 |
+ |
RS3927 |
Unspecified |
scaffold7307 |
122390 |
122419 |
+ |
(TACA)n |
Simple_repeat |
scaffold7307 |
122460 |
122522 |
+ |
G-rich |
Low_complexity |