scaffold7411 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold7411 |
20 |
61 |
+ |
GA-rich |
Low_complexity |
| scaffold7411 |
706 |
748 |
+ |
A-rich |
Low_complexity |
| scaffold7411 |
1493 |
1520 |
+ |
(TTTTA)n |
Simple_repeat |
| scaffold7411 |
1976 |
2054 |
+ |
(TTAACTA)n |
Simple_repeat |
| scaffold7411 |
2124 |
2225 |
+ |
RS3951 |
Unspecified |
| scaffold7411 |
2272 |
2336 |
+ |
(A)n |
Simple_repeat |
| scaffold7411 |
2549 |
2591 |
+ |
A-rich |
Low_complexity |
| scaffold7411 |
2633 |
2700 |
+ |
(ATAA)n |
Simple_repeat |
| scaffold7411 |
3129 |
3188 |
+ |
(TTA)n |
Simple_repeat |
| scaffold7411 |
3848 |
3973 |
- |
RS12750 |
Unspecified |
| scaffold7411 |
4220 |
4262 |
+ |
(CAATT)n |
Simple_repeat |
| scaffold7411 |
4367 |
4436 |
- |
RS429 |
Unspecified |
| scaffold7411 |
4437 |
4583 |
- |
RS3521 |
Unspecified |
| scaffold7411 |
4587 |
4779 |
+ |
(ACC)n |
Simple_repeat |
| scaffold7411 |
5005 |
5090 |
+ |
A-rich |
Low_complexity |
| scaffold7411 |
5327 |
5470 |
- |
RS429 |
Unspecified |
| scaffold7411 |
5514 |
5695 |
+ |
RS5 |
Unspecified |
| scaffold7411 |
5953 |
6625 |
- |
PL504 |
Unspecified |
| scaffold7411 |
7167 |
7207 |
+ |
A-rich |
Low_complexity |
| scaffold7411 |
7633 |
7652 |
+ |
(A)n |
Simple_repeat |
| scaffold7411 |
8277 |
9177 |
- |
RS1367 |
Unspecified |
| scaffold7411 |
8963 |
9492 |
- |
RS3121 |
Unspecified |
| scaffold7411 |
9544 |
9591 |
- |
LTR-7_Mad-LTR |
LTR |
| scaffold7411 |
10015 |
10112 |
+ |
ATRAN |
DNA? |
| scaffold7411 |
10937 |
11007 |
+ |
GA-rich |
Low_complexity |
| scaffold7411 |
11771 |
11821 |
- |
RS15470 |
Unspecified |
| scaffold7411 |
11822 |
11909 |
- |
RS84 |
Unspecified |
| scaffold7411 |
11993 |
12043 |
+ |
(T)n |
Simple_repeat |
| scaffold7411 |
12104 |
12154 |
+ |
(T)n |
Simple_repeat |
| scaffold7411 |
12298 |
12382 |
- |
LTR-2_MX-LTR |
LTR |
| scaffold7411 |
13635 |
13802 |
- |
RS10 |
Unspecified |
| scaffold7411 |
13808 |
13907 |
- |
RS16382 |
Unspecified |
| scaffold7411 |
14216 |
14358 |
- |
PL605 |
Unspecified |
| scaffold7411 |
14222 |
14418 |
+ |
LTR-1_SBi-LTR |
LTR |
| scaffold7411 |
14850 |
14903 |
+ |
A-rich |
Low_complexity |
| scaffold7411 |
14962 |
15009 |
+ |
RS322 |
Unspecified |
| scaffold7411 |
15228 |
15235 |
+ |
(TTCTT)n |
Simple_repeat |
| scaffold7411 |
15236 |
15268 |
+ |
(T)n |
Simple_repeat |
| scaffold7411 |
15269 |
15311 |
+ |
(TTCTT)n |
Simple_repeat |
| scaffold7411 |
15714 |
15737 |
+ |
(T)n |
Simple_repeat |
| scaffold7411 |
15778 |
16091 |
+ |
RS1716 |
Unspecified |
| scaffold7411 |
16090 |
16428 |
+ |
RS322 |
Unspecified |
| scaffold7411 |
17346 |
17442 |
+ |
RS285 |
Unspecified |
| scaffold7411 |
19432 |
19480 |
+ |
GA-rich |
Low_complexity |
| scaffold7411 |
19606 |
19727 |
+ |
RS7524 |
Unspecified |
| scaffold7411 |
19886 |
19946 |
+ |
(TTATTAA)n |
Simple_repeat |
| scaffold7411 |
20015 |
20088 |
+ |
(TTTTAAT)n |
Simple_repeat |
| scaffold7411 |
20115 |
20376 |
+ |
RS3687 |
Unspecified |
| scaffold7411 |
20499 |
20515 |
+ |
(A)n |
Simple_repeat |
| scaffold7411 |
20763 |
21141 |
- |
RS1818 |
Unspecified |
| scaffold7411 |
21284 |
21307 |
+ |
(T)n |
Simple_repeat |
| scaffold7411 |
21873 |
22365 |
+ |
RS1781 |
Unspecified |
| scaffold7411 |
22197 |
22559 |
+ |
PL757 |
Unspecified |
| scaffold7411 |
22561 |
22617 |
+ |
(AATTTTA)n |
Simple_repeat |
| scaffold7411 |
23579 |
23625 |
+ |
(ATTA)n |
Simple_repeat |
| scaffold7411 |
23882 |
23940 |
+ |
(TTA)n |
Simple_repeat |
| scaffold7411 |
24357 |
24407 |
+ |
(AT)n |
Simple_repeat |
| scaffold7411 |
24846 |
24917 |
+ |
(AT)n |
Simple_repeat |
| scaffold7411 |
26696 |
26730 |
+ |
(TTTTG)n |
Simple_repeat |
| scaffold7411 |
26914 |
27015 |
- |
RS17 |
Unspecified |
| scaffold7411 |
27524 |
27616 |
+ |
RS8 |
Unspecified |
| scaffold7411 |
27616 |
27830 |
- |
PL701 |
Unspecified |
| scaffold7411 |
27793 |
27878 |
+ |
PL105 |
Unspecified |
| scaffold7411 |
27878 |
28139 |
- |
RS8 |
Unspecified |
| scaffold7411 |
28364 |
28417 |
+ |
(AAT)n |
Simple_repeat |
| scaffold7411 |
28767 |
28789 |
+ |
(A)n |
Simple_repeat |
| scaffold7411 |
29884 |
30127 |
+ |
RS4 |
Unspecified |
| scaffold7411 |
30641 |
30712 |
+ |
(AATTTG)n |
Simple_repeat |
| scaffold7411 |
30959 |
31026 |
+ |
HAT-N10_Mad |
DNA/hAT-Ac |
| scaffold7411 |
31380 |
31419 |
+ |
(A)n |
Simple_repeat |
| scaffold7411 |
31442 |
31465 |
+ |
(A)n |
Simple_repeat |
| scaffold7411 |
31636 |
31876 |
- |
Copia-50_SB-I |
LTR/Copia |
| scaffold7411 |
31813 |
31876 |
- |
Copia-50_SB-I |
LTR/Copia |
| scaffold7411 |
32255 |
32286 |
+ |
(T)n |
Simple_repeat |
| scaffold7411 |
33410 |
34975 |
- |
RS403 |
Unspecified |
| scaffold7411 |
35029 |
35079 |
+ |
(TA)n |
Simple_repeat |
| scaffold7411 |
35185 |
35955 |
+ |
PL344 |
Unspecified |
| scaffold7411 |
35857 |
36051 |
+ |
RS4750 |
Unspecified |
| scaffold7411 |
36059 |
36531 |
+ |
RS7003 |
Unspecified |
| scaffold7411 |
36898 |
36950 |
+ |
(TGT)n |
Simple_repeat |
| scaffold7411 |
37710 |
37879 |
+ |
PL799 |
Unspecified |
| scaffold7411 |
37871 |
38034 |
- |
RS1403 |
Unspecified |
| scaffold7411 |
38035 |
38174 |
- |
RS384 |
Unspecified |
| scaffold7411 |
38174 |
38589 |
- |
RS507 |
Unspecified |
| scaffold7411 |
38658 |
38850 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold7411 |
38959 |
39003 |
- |
LTR-7_Mad-LTR |
LTR |
| scaffold7411 |
39427 |
39524 |
+ |
PL255 |
Unspecified |
| scaffold7411 |
39659 |
39781 |
- |
PL368 |
Unspecified |
| scaffold7411 |
40074 |
40091 |
+ |
(A)n |
Simple_repeat |
| scaffold7411 |
40659 |
40706 |
+ |
(CATA)n |
Simple_repeat |
| scaffold7411 |
40707 |
40931 |
- |
Copia2-LTR_VC |
Satellite |
| scaffold7411 |
40932 |
41074 |
+ |
(CATA)n |
Simple_repeat |
| scaffold7411 |
41076 |
41104 |
+ |
(AACACC)n |
Simple_repeat |
| scaffold7411 |
41105 |
41202 |
+ |
(AAC)n |
Simple_repeat |
| scaffold7411 |
41203 |
41290 |
+ |
(AACACC)n |
Simple_repeat |
| scaffold7411 |
41627 |
41760 |
+ |
PL368 |
Unspecified |
| scaffold7411 |
41884 |
42023 |
+ |
PL368 |
Unspecified |
| scaffold7411 |
41924 |
42421 |
- |
PL368 |
Unspecified |
| scaffold7411 |
42066 |
42421 |
- |
RS5599 |
Unspecified |
| scaffold7411 |
43134 |
43255 |
+ |
(TCGGG)n |
Simple_repeat |
| scaffold7411 |
43563 |
43645 |
+ |
HAT-10_Mad |
DNA/hAT-Ac |
| scaffold7411 |
43580 |
43742 |
+ |
(TCGGG)n |
Simple_repeat |
| scaffold7411 |
44450 |
44474 |
+ |
(A)n |
Simple_repeat |
| scaffold7411 |
44565 |
44611 |
+ |
(TAA)n |
Simple_repeat |
| scaffold7411 |
45055 |
45101 |
+ |
(TTA)n |
Simple_repeat |
| scaffold7411 |
45866 |
45882 |
+ |
(T)n |
Simple_repeat |
| scaffold7411 |
46294 |
46337 |
+ |
(TAGATA)n |
Simple_repeat |
| scaffold7411 |
48003 |
48191 |
+ |
RS221 |
Unspecified |
| scaffold7411 |
48204 |
48348 |
+ |
RS115 |
Unspecified |
| scaffold7411 |
48611 |
48636 |
+ |
(T)n |
Simple_repeat |
| scaffold7411 |
48836 |
48905 |
+ |
(GGC)n |
Simple_repeat |
| scaffold7411 |
48908 |
48947 |
+ |
(GGTTGGC)n |
Simple_repeat |
| scaffold7411 |
49046 |
49307 |
- |
RS1 |
Unspecified |
| scaffold7411 |
49303 |
49361 |
+ |
RS13542 |
Unspecified |
| scaffold7411 |
49659 |
49695 |
+ |
(AATCC)n |
Simple_repeat |
| scaffold7411 |
49854 |
49883 |
+ |
(T)n |
Simple_repeat |
| scaffold7411 |
49854 |
50307 |
+ |
(T)n |
Simple_repeat |
| scaffold7411 |
49874 |
50307 |
+ |
RS1018 |
Unspecified |
| scaffold7411 |
50431 |
50602 |
- |
RS663 |
Unspecified |
| scaffold7411 |
50792 |
50836 |
+ |
A-rich |
Low_complexity |
| scaffold7411 |
51327 |
51473 |
- |
RS8636 |
Unspecified |
| scaffold7411 |
51937 |
51970 |
+ |
(AAG)n |
Simple_repeat |
| scaffold7411 |
52193 |
52246 |
+ |
A-rich |
Low_complexity |
| scaffold7411 |
53169 |
53200 |
+ |
(TACA)n |
Simple_repeat |
| scaffold7411 |
53343 |
53384 |
- |
RS18111 |
Unspecified |
| scaffold7411 |
53986 |
54052 |
+ |
A-rich |
Low_complexity |
| scaffold7411 |
57144 |
57186 |
+ |
(T)n |
Simple_repeat |
| scaffold7411 |
57224 |
57259 |
+ |
(AAT)n |
Simple_repeat |
| scaffold7411 |
57786 |
57830 |
+ |
(TTAA)n |
Simple_repeat |
| scaffold7411 |
58117 |
58139 |
+ |
(T)n |
Simple_repeat |
| scaffold7411 |
61279 |
61305 |
+ |
(CTC)n |
Simple_repeat |
| scaffold7411 |
61608 |
61628 |
+ |
(TA)n |
Simple_repeat |
| scaffold7411 |
62010 |
62118 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold7411 |
62144 |
62190 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold7411 |
62215 |
62287 |
+ |
RS509 |
Unspecified |
| scaffold7411 |
63528 |
63705 |
+ |
RS18243 |
Unspecified |
| scaffold7411 |
63880 |
63910 |
+ |
(A)n |
Simple_repeat |
| scaffold7411 |
63954 |
64014 |
+ |
PIGY-I_PS |
LTR/Gypsy |
| scaffold7411 |
64317 |
64370 |
+ |
A-rich |
Low_complexity |
| scaffold7411 |
64775 |
65039 |
+ |
RS356 |
Unspecified |
| scaffold7411 |
65863 |
65986 |
- |
RS1880 |
Unspecified |
| scaffold7411 |
65989 |
66226 |
- |
RS16888 |
Unspecified |
| scaffold7411 |
66129 |
66239 |
+ |
RS15433 |
Unspecified |
| scaffold7411 |
66474 |
66892 |
- |
PL886 |
Unspecified |
| scaffold7411 |
67077 |
67134 |
+ |
(TTTAA)n |
Simple_repeat |
| scaffold7411 |
67878 |
67914 |
+ |
A-rich |
Low_complexity |
| scaffold7411 |
68040 |
68074 |
+ |
(TCTTTT)n |
Simple_repeat |
| scaffold7411 |
70714 |
70782 |
+ |
(GAATTT)n |
Simple_repeat |
| scaffold7411 |
71325 |
71485 |
+ |
RS17380 |
Unspecified |
| scaffold7411 |
72179 |
72205 |
+ |
(A)n |
Simple_repeat |
| scaffold7411 |
72759 |
72792 |
+ |
(CTCCC)n |
Simple_repeat |
| scaffold7411 |
72933 |
72977 |
+ |
(ATCTAT)n |
Simple_repeat |
| scaffold7411 |
73103 |
73146 |
+ |
(TCATCTT)n |
Simple_repeat |
| scaffold7411 |
73335 |
73394 |
+ |
(ATA)n |
Simple_repeat |