scaffold7501 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold7501 |
321 |
1927 |
- |
Gypsy-52_Mad-I |
LTR/Gypsy |
| scaffold7501 |
3028 |
3092 |
- |
ATCopia80_I-int |
LTR/Copia |
| scaffold7501 |
4765 |
4863 |
+ |
RS5738 |
Unspecified |
| scaffold7501 |
5174 |
5203 |
+ |
(TGA)n |
Simple_repeat |
| scaffold7501 |
5916 |
6270 |
- |
PL3 |
Unspecified |
| scaffold7501 |
10576 |
10689 |
+ |
Gypsy-46_STu-I |
LTR/Gypsy |
| scaffold7501 |
14486 |
14619 |
- |
PL535 |
Unspecified |
| scaffold7501 |
14857 |
14878 |
+ |
(A)n |
Simple_repeat |
| scaffold7501 |
14879 |
15120 |
+ |
RS4 |
Unspecified |
| scaffold7501 |
15607 |
15626 |
+ |
(ATT)n |
Simple_repeat |
| scaffold7501 |
17648 |
17850 |
+ |
(CTGAA)n |
Simple_repeat |
| scaffold7501 |
18031 |
18374 |
- |
RS12964 |
Unspecified |
| scaffold7501 |
19601 |
19656 |
+ |
GA-rich |
Low_complexity |
| scaffold7501 |
19991 |
20024 |
+ |
G-rich |
Low_complexity |
| scaffold7501 |
20040 |
20085 |
+ |
(T)n |
Simple_repeat |
| scaffold7501 |
20097 |
20148 |
+ |
(GGT)n |
Simple_repeat |
| scaffold7501 |
20246 |
20284 |
+ |
GA-rich |
Low_complexity |
| scaffold7501 |
20342 |
20378 |
+ |
RS2999 |
Unspecified |
| scaffold7501 |
20396 |
20762 |
+ |
PL582 |
Unspecified |
| scaffold7501 |
20719 |
20773 |
+ |
PL402 |
Unspecified |
| scaffold7501 |
22175 |
22540 |
+ |
RS8194 |
Unspecified |
| scaffold7501 |
23851 |
23893 |
+ |
(ATAA)n |
Simple_repeat |
| scaffold7501 |
23929 |
24012 |
+ |
(CTGAA)n |
Simple_repeat |
| scaffold7501 |
24036 |
24096 |
+ |
(AACTG)n |
Simple_repeat |
| scaffold7501 |
25811 |
25931 |
+ |
RS560 |
Unspecified |
| scaffold7501 |
26136 |
26197 |
+ |
(CA)n |
Simple_repeat |
| scaffold7501 |
27339 |
27357 |
+ |
(AATCAAT)n |
Simple_repeat |
| scaffold7501 |
27358 |
27399 |
+ |
(AAT)n |
Simple_repeat |
| scaffold7501 |
27400 |
27433 |
+ |
(AATCAAT)n |
Simple_repeat |
| scaffold7501 |
27577 |
27643 |
+ |
RS126 |
Unspecified |
| scaffold7501 |
27656 |
27786 |
+ |
RS126 |
Unspecified |
| scaffold7501 |
28139 |
28323 |
+ |
L1-4_VC |
LINE/L1 |
| scaffold7501 |
28879 |
28985 |
+ |
(ATG)n |
Simple_repeat |
| scaffold7501 |
30101 |
30137 |
+ |
(T)n |
Simple_repeat |
| scaffold7501 |
30185 |
30227 |
+ |
A-rich |
Low_complexity |
| scaffold7501 |
30536 |
30879 |
+ |
RS512 |
Unspecified |
| scaffold7501 |
31204 |
31233 |
+ |
(A)n |
Simple_repeat |
| scaffold7501 |
33844 |
33975 |
- |
RS1599 |
Unspecified |
| scaffold7501 |
34031 |
34073 |
+ |
A-rich |
Low_complexity |
| scaffold7501 |
34309 |
34356 |
+ |
(TGG)n |
Simple_repeat |
| scaffold7501 |
34789 |
34835 |
+ |
(A)n |
Simple_repeat |
| scaffold7501 |
35007 |
35026 |
+ |
(A)n |
Simple_repeat |
| scaffold7501 |
35204 |
35546 |
- |
RS2013 |
Unspecified |
| scaffold7501 |
35537 |
35877 |
+ |
RS3896 |
Unspecified |
| scaffold7501 |
35873 |
36042 |
+ |
RS3896 |
Unspecified |
| scaffold7501 |
36084 |
36168 |
+ |
LTR-7_Mad-LTR |
LTR |
| scaffold7501 |
36940 |
36964 |
+ |
(TAT)n |
Simple_repeat |
| scaffold7501 |
37026 |
37059 |
+ |
A-rich |
Low_complexity |
| scaffold7501 |
37335 |
37564 |
+ |
RS549 |
Unspecified |
| scaffold7501 |
37736 |
37765 |
+ |
A-rich |
Low_complexity |
| scaffold7501 |
37858 |
37905 |
+ |
(T)n |
Simple_repeat |
| scaffold7501 |
38092 |
38120 |
+ |
(AAT)n |
Simple_repeat |
| scaffold7501 |
38121 |
38199 |
+ |
(TAT)n |
Simple_repeat |
| scaffold7501 |
38200 |
38271 |
+ |
(AAT)n |
Simple_repeat |
| scaffold7501 |
38353 |
38394 |
+ |
A-rich |
Low_complexity |
| scaffold7501 |
38494 |
38958 |
+ |
RS13440 |
Unspecified |
| scaffold7501 |
39049 |
39172 |
+ |
RS3339 |
Unspecified |
| scaffold7501 |
40099 |
40129 |
+ |
(A)n |
Simple_repeat |
| scaffold7501 |
41895 |
42181 |
- |
PL90 |
Unspecified |
| scaffold7501 |
42021 |
42277 |
+ |
RS1718 |
Unspecified |
| scaffold7501 |
42542 |
42681 |
+ |
GA-rich |
Low_complexity |
| scaffold7501 |
44234 |
44278 |
+ |
(TAATT)n |
Simple_repeat |
| scaffold7501 |
45039 |
45086 |
+ |
A-rich |
Low_complexity |
| scaffold7501 |
45099 |
45149 |
+ |
(GCCTAG)n |
Simple_repeat |
| scaffold7501 |
45706 |
45784 |
+ |
(ATACT)n |
Simple_repeat |
| scaffold7501 |
46253 |
46297 |
+ |
(AAAAAG)n |
Simple_repeat |
| scaffold7501 |
46443 |
46766 |
+ |
RS17617 |
Unspecified |
| scaffold7501 |
46897 |
47229 |
+ |
RS2543 |
Unspecified |
| scaffold7501 |
47447 |
47527 |
+ |
(TTTTT)n |
Simple_repeat |
| scaffold7501 |
47537 |
47582 |
+ |
A-rich |
Low_complexity |
| scaffold7501 |
47667 |
47691 |
+ |
(A)n |
Simple_repeat |
| scaffold7501 |
47853 |
48200 |
+ |
PL504 |
Unspecified |
| scaffold7501 |
48554 |
49131 |
+ |
RS1340 |
Unspecified |
| scaffold7501 |
49962 |
50273 |
+ |
PL376 |
Unspecified |
| scaffold7501 |
50308 |
50545 |
+ |
PL376 |
Unspecified |
| scaffold7501 |
50740 |
50761 |
+ |
(T)n |
Simple_repeat |
| scaffold7501 |
52121 |
52166 |
+ |
(TATATG)n |
Simple_repeat |
| scaffold7501 |
52654 |
52706 |
+ |
(TAT)n |
Simple_repeat |
| scaffold7501 |
53034 |
53077 |
+ |
(ATTA)n |
Simple_repeat |
| scaffold7501 |
53283 |
53361 |
+ |
(TAAT)n |
Simple_repeat |
| scaffold7501 |
53826 |
53856 |
+ |
(T)n |
Simple_repeat |
| scaffold7501 |
53999 |
54016 |
+ |
(T)n |
Simple_repeat |
| scaffold7501 |
55244 |
55282 |
+ |
(TGTGTC)n |
Simple_repeat |
| scaffold7501 |
55283 |
55304 |
+ |
(GT)n |
Simple_repeat |
| scaffold7501 |
56998 |
57575 |
+ |
RS6148 |
Unspecified |
| scaffold7501 |
57572 |
57630 |
+ |
RS6148 |
Unspecified |
| scaffold7501 |
57697 |
59319 |
- |
Copia-2_SL-I |
LTR/Copia |
| scaffold7501 |
59536 |
62139 |
- |
Copia-2_SL-I |
LTR/Copia |
| scaffold7501 |
59536 |
61830 |
- |
Copia-2_SL-I |
LTR/Copia |
| scaffold7501 |
61752 |
62139 |
+ |
RS1931 |
Unspecified |
| scaffold7501 |
62617 |
62665 |
+ |
Copia-46_GM-I |
LTR/Copia |
| scaffold7501 |
62839 |
63701 |
+ |
Copia-46_GM-I |
LTR/Copia |
| scaffold7501 |
63974 |
64138 |
- |
RS295 |
Unspecified |
| scaffold7501 |
63979 |
64169 |
+ |
PL82 |
Unspecified |
| scaffold7501 |
64869 |
64885 |
+ |
(T)n |
Simple_repeat |
| scaffold7501 |
65160 |
66789 |
+ |
Copia-82_GM-I |
LTR/Copia |
| scaffold7501 |
67908 |
68173 |
+ |
RS10 |
Unspecified |
| scaffold7501 |
68472 |
68507 |
+ |
A-rich |
Low_complexity |
| scaffold7501 |
69187 |
69221 |
+ |
(ATC)n |
Simple_repeat |
| scaffold7501 |
72311 |
73321 |
+ |
LINE |
LINE(TransposonPSI) |
| scaffold7501 |
72821 |
73310 |
+ |
LINE1-24_SBi |
LINE/L1 |
| scaffold7501 |
73350 |
73552 |
- |
PL176 |
Unspecified |
| scaffold7501 |
74553 |
75162 |
+ |
PL355 |
Unspecified |
| scaffold7501 |
78225 |
79478 |
- |
RS195 |
Unspecified |
| scaffold7501 |
79401 |
79706 |
+ |
RS192 |
Unspecified |
| scaffold7501 |
79487 |
79883 |
- |
RS911 |
Unspecified |
| scaffold7501 |
80388 |
80409 |
+ |
(T)n |
Simple_repeat |
| scaffold7501 |
80994 |
81551 |
+ |
RS151 |
Unspecified |
| scaffold7501 |
81026 |
81475 |
+ |
RS247 |
Unspecified |
| scaffold7501 |
81146 |
81597 |
+ |
RS247 |
Unspecified |
| scaffold7501 |
81821 |
81903 |
+ |
(CAAGCA)n |
Simple_repeat |
| scaffold7501 |
82489 |
82547 |
+ |
A-rich |
Low_complexity |
| scaffold7501 |
82828 |
83813 |
+ |
PL355 |
Unspecified |
| scaffold7501 |
85536 |
85559 |
+ |
(T)n |
Simple_repeat |
| scaffold7501 |
87291 |
87338 |
+ |
(ATGTACA)n |
Simple_repeat |
| scaffold7501 |
87510 |
87539 |
+ |
(TTTCGG)n |
Simple_repeat |
| scaffold7501 |
87581 |
87694 |
- |
RS13232 |
Unspecified |
| scaffold7501 |
87870 |
87908 |
+ |
(ATATA)n |
Simple_repeat |
| scaffold7501 |
88415 |
88540 |
- |
RS6439 |
Unspecified |
| scaffold7501 |
88535 |
90143 |
- |
Copia-71_VV-I |
LTR/Copia |
| scaffold7501 |
90492 |
91782 |
- |
Copia-71_VV-I |
LTR/Copia |
| scaffold7501 |
91852 |
92490 |
- |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold7501 |
92036 |
92406 |
- |
Copia-71_VV-I |
LTR/Copia |
| scaffold7501 |
93404 |
93466 |
- |
RS6439 |
Unspecified |
| scaffold7501 |
93521 |
93553 |
+ |
(T)n |
Simple_repeat |
| scaffold7501 |
94018 |
94072 |
+ |
(TCT)n |
Simple_repeat |
| scaffold7501 |
101836 |
102123 |
- |
LINE |
LINE(TransposonPSI) |
| scaffold7501 |
101836 |
102194 |
- |
LINE |
LINE(TransposonPSI) |
| scaffold7501 |
102103 |
102194 |
- |
RS1080 |
Unspecified |
| scaffold7501 |
102593 |
102835 |
- |
LINE |
LINE(TransposonPSI) |
| scaffold7501 |
102824 |
103136 |
- |
RS1431 |
Unspecified |
| scaffold7501 |
102987 |
103183 |
- |
RS851 |
Unspecified |
| scaffold7501 |
103183 |
103282 |
- |
RS851 |
Unspecified |
| scaffold7501 |
103239 |
103361 |
+ |
RS3314 |
Unspecified |
| scaffold7501 |
104395 |
105884 |
- |
Copia-65_Mad-I |
LTR/Copia |
| scaffold7501 |
106142 |
106506 |
- |
Copia-65_Mad-I |
LTR/Copia |
| scaffold7501 |
108565 |
108709 |
- |
RS4778 |
Unspecified |
| scaffold7501 |
108874 |
109014 |
- |
RS13297 |
Unspecified |
| scaffold7501 |
109079 |
109142 |
+ |
A-rich |
Low_complexity |
| scaffold7501 |
109964 |
110324 |
- |
RS1431 |
Unspecified |
| scaffold7501 |
110175 |
110390 |
- |
RS851 |
Unspecified |
| scaffold7501 |
111261 |
111446 |
+ |
RS23 |
Unspecified |
| scaffold7501 |
112921 |
113065 |
+ |
RS14200 |
Unspecified |
| scaffold7501 |
115061 |
116418 |
+ |
RS249 |
Unspecified |
| scaffold7501 |
116056 |
116606 |
+ |
RS88 |
Unspecified |
| scaffold7501 |
116117 |
117641 |
+ |
RS88 |
Unspecified |
| scaffold7501 |
116766 |
119371 |
+ |
RS141 |
Unspecified |