scaffold7534 Repeat List
genome |
start |
end |
strand |
repeat-name |
repeat-class |
scaffold7534 |
132 |
374 |
- |
RS1085 |
Unspecified |
scaffold7534 |
550 |
673 |
- |
RS4475 |
Unspecified |
scaffold7534 |
573 |
666 |
+ |
RS16382 |
Unspecified |
scaffold7534 |
950 |
1182 |
- |
RS4 |
Unspecified |
scaffold7534 |
1576 |
1665 |
- |
RS9336 |
Unspecified |
scaffold7534 |
1604 |
1779 |
- |
RS9336 |
Unspecified |
scaffold7534 |
1873 |
2047 |
- |
RS287 |
Unspecified |
scaffold7534 |
2146 |
2165 |
+ |
(T)n |
Simple_repeat |
scaffold7534 |
3093 |
3111 |
+ |
(A)n |
Simple_repeat |
scaffold7534 |
3218 |
3263 |
- |
RS8218 |
Unspecified |
scaffold7534 |
3305 |
3472 |
- |
RS8218 |
Unspecified |
scaffold7534 |
3472 |
3520 |
+ |
RS1085 |
Unspecified |
scaffold7534 |
3957 |
3997 |
+ |
(ATA)n |
Simple_repeat |
scaffold7534 |
4029 |
4066 |
+ |
(ATCATG)n |
Simple_repeat |
scaffold7534 |
4067 |
4073 |
+ |
(ATG)n |
Simple_repeat |
scaffold7534 |
4571 |
5089 |
- |
PL592 |
Unspecified |
scaffold7534 |
5855 |
5880 |
+ |
(TA)n |
Simple_repeat |
scaffold7534 |
6154 |
6256 |
+ |
RS17072 |
Unspecified |
scaffold7534 |
6198 |
6377 |
- |
RS6 |
Unspecified |
scaffold7534 |
6720 |
6753 |
+ |
(ATT)n |
Simple_repeat |
scaffold7534 |
6954 |
7017 |
- |
RS9289 |
Unspecified |
scaffold7534 |
6963 |
7018 |
- |
RS15179 |
Unspecified |
scaffold7534 |
7441 |
7601 |
+ |
RS16109 |
Unspecified |
scaffold7534 |
7525 |
7723 |
+ |
RS16109 |
Unspecified |
scaffold7534 |
8183 |
8286 |
- |
RS8788 |
Unspecified |
scaffold7534 |
8347 |
8426 |
- |
RS79 |
Unspecified |
scaffold7534 |
8427 |
8765 |
- |
RS2386 |
Unspecified |
scaffold7534 |
8759 |
8872 |
- |
RS79 |
Unspecified |
scaffold7534 |
9255 |
9446 |
+ |
(CAGTT)n |
Simple_repeat |
scaffold7534 |
9919 |
10160 |
+ |
RS4 |
Unspecified |
scaffold7534 |
10182 |
10239 |
+ |
(TTTATT)n |
Simple_repeat |
scaffold7534 |
10646 |
10708 |
+ |
Copia-3_PTri-I |
LTR/Copia |
scaffold7534 |
10723 |
10813 |
- |
Copia-3_PTri-I |
LTR/Copia |
scaffold7534 |
11021 |
11128 |
+ |
RS17794 |
Unspecified |
scaffold7534 |
11884 |
11901 |
+ |
(T)n |
Simple_repeat |
scaffold7534 |
12430 |
12530 |
+ |
RS18074 |
Unspecified |
scaffold7534 |
13320 |
13371 |
+ |
(CAATAG)n |
Simple_repeat |
scaffold7534 |
14008 |
14025 |
+ |
(C)n |
Simple_repeat |
scaffold7534 |
14045 |
14094 |
+ |
(T)n |
Simple_repeat |
scaffold7534 |
14358 |
14682 |
- |
PIGY-I_PS |
LTR/Gypsy |
scaffold7534 |
15298 |
15542 |
+ |
RS14967 |
Unspecified |
scaffold7534 |
15706 |
15765 |
+ |
A-rich |
Low_complexity |
scaffold7534 |
16058 |
16304 |
- |
PL345 |
Unspecified |
scaffold7534 |
17446 |
17464 |
+ |
(A)n |
Simple_repeat |
scaffold7534 |
17654 |
17716 |
+ |
A-rich |
Low_complexity |
scaffold7534 |
18110 |
18207 |
+ |
RS4475 |
Unspecified |
scaffold7534 |
18298 |
18440 |
+ |
RS4513 |
Unspecified |
scaffold7534 |
20240 |
20263 |
+ |
(A)n |
Simple_repeat |
scaffold7534 |
20945 |
20995 |
+ |
(CTCGAG)n |
Simple_repeat |
scaffold7534 |
21541 |
21598 |
+ |
A-rich |
Low_complexity |
scaffold7534 |
21647 |
21689 |
+ |
(CAC)n |
Simple_repeat |
scaffold7534 |
21903 |
21935 |
+ |
(A)n |
Simple_repeat |
scaffold7534 |
22412 |
22429 |
+ |
(T)n |
Simple_repeat |
scaffold7534 |
26830 |
26881 |
- |
CPSC4B_I-int |
LTR/Copia |
scaffold7534 |
28138 |
28154 |
+ |
(T)n |
Simple_repeat |
scaffold7534 |
28414 |
28459 |
+ |
(TTTTC)n |
Simple_repeat |
scaffold7534 |
28471 |
28561 |
+ |
RS573 |
Unspecified |
scaffold7534 |
28553 |
28650 |
+ |
SINE2-1_PD |
SINE/tRNA-RTE |
scaffold7534 |
28655 |
28678 |
+ |
(TGT)n |
Simple_repeat |
scaffold7534 |
30800 |
30859 |
+ |
(CTGAA)n |
Simple_repeat |
scaffold7534 |
38158 |
38179 |
+ |
(AAAC)n |
Simple_repeat |
scaffold7534 |
40927 |
40944 |
+ |
(A)n |
Simple_repeat |
scaffold7534 |
41814 |
42084 |
- |
RS14139 |
Unspecified |
scaffold7534 |
42205 |
42307 |
- |
RS9368 |
Unspecified |
scaffold7534 |
43127 |
43163 |
+ |
(TGTATTA)n |
Simple_repeat |
scaffold7534 |
43361 |
43501 |
- |
RS13977 |
Unspecified |
scaffold7534 |
43690 |
43961 |
- |
RS14139 |
Unspecified |
scaffold7534 |
44114 |
44216 |
- |
RS9368 |
Unspecified |
scaffold7534 |
44360 |
44500 |
- |
RS13977 |
Unspecified |
scaffold7534 |
44613 |
44893 |
- |
RS17689 |
Unspecified |
scaffold7534 |
46675 |
46702 |
+ |
(TCG)n |
Simple_repeat |
scaffold7534 |
46806 |
46854 |
+ |
GA-rich |
Low_complexity |
scaffold7534 |
47075 |
47217 |
+ |
(AGCTG)n |
Simple_repeat |
scaffold7534 |
48939 |
48984 |
+ |
(AAAAACG)n |
Simple_repeat |
scaffold7534 |
49402 |
49438 |
+ |
(ACAA)n |
Simple_repeat |
scaffold7534 |
49439 |
49464 |
+ |
(A)n |
Simple_repeat |
scaffold7534 |
51273 |
51313 |
+ |
(TACTT)n |
Simple_repeat |
scaffold7534 |
52490 |
52654 |
- |
cacta |
cacta(TransposonPSI) |
scaffold7534 |
52602 |
52644 |
+ |
(CCG)n |
Simple_repeat |
scaffold7534 |
52901 |
52925 |
+ |
(GAA)n |
Simple_repeat |
scaffold7534 |
59113 |
59159 |
- |
RS145 |
Unspecified |
scaffold7534 |
59157 |
59285 |
- |
RS145 |
Unspecified |
scaffold7534 |
59772 |
59812 |
+ |
A-rich |
Low_complexity |
scaffold7534 |
59934 |
59944 |
+ |
(TAAT)n |
Simple_repeat |
scaffold7534 |
59945 |
60008 |
+ |
(TTAAT)n |
Simple_repeat |
scaffold7534 |
60310 |
60333 |
+ |
(T)n |
Simple_repeat |
scaffold7534 |
60620 |
60673 |
+ |
(TTGAAT)n |
Simple_repeat |
scaffold7534 |
60670 |
60691 |
+ |
(T)n |
Simple_repeat |
scaffold7534 |
62327 |
62392 |
- |
BvL1 |
LINE/L1 |
scaffold7534 |
62839 |
62883 |
+ |
(TTATTT)n |
Simple_repeat |
scaffold7534 |
63259 |
63646 |
+ |
RS29 |
Unspecified |
scaffold7534 |
63691 |
64045 |
- |
PL582 |
Unspecified |
scaffold7534 |
64708 |
64902 |
- |
RS1574 |
Unspecified |
scaffold7534 |
64930 |
65162 |
- |
LTR-1_SBi-LTR |
LTR |
scaffold7534 |
66820 |
67029 |
+ |
BvL1-2 |
LINE/L1 |
scaffold7534 |
67666 |
67705 |
+ |
(T)n |
Simple_repeat |
scaffold7534 |
67793 |
67831 |
+ |
(TATTCTT)n |
Simple_repeat |
scaffold7534 |
68086 |
68478 |
+ |
RS29 |
Unspecified |
scaffold7534 |
68523 |
68878 |
- |
PL582 |
Unspecified |
scaffold7534 |
70165 |
70330 |
+ |
RS620 |
Unspecified |
scaffold7534 |
70225 |
70428 |
- |
RS1062 |
Unspecified |
scaffold7534 |
70467 |
70517 |
+ |
(CCA)n |
Simple_repeat |
scaffold7534 |
70572 |
70635 |
+ |
(CCCGC)n |
Simple_repeat |
scaffold7534 |
70731 |
71183 |
- |
PL699 |
Unspecified |
scaffold7534 |
71568 |
71595 |
+ |
(ATACA)n |
Simple_repeat |
scaffold7534 |
71812 |
71850 |
- |
RS18032 |
Unspecified |
scaffold7534 |
71819 |
71894 |
- |
RS5 |
Unspecified |
scaffold7534 |
71893 |
72059 |
- |
RS5 |
Unspecified |
scaffold7534 |
72085 |
72126 |
+ |
(TTTGTTG)n |
Simple_repeat |
scaffold7534 |
73690 |
73738 |
+ |
(TGT)n |
Simple_repeat |
scaffold7534 |
74385 |
74428 |
+ |
SINE2-1_PD |
SINE/tRNA-RTE |
scaffold7534 |
75005 |
75045 |
- |
RS2008 |
Unspecified |
scaffold7534 |
76735 |
76795 |
- |
RS6506 |
Unspecified |
scaffold7534 |
76850 |
76912 |
+ |
(T)n |
Simple_repeat |
scaffold7534 |
77308 |
77360 |
+ |
SINE2-1_PD |
SINE/tRNA-RTE |
scaffold7534 |
77922 |
77966 |
- |
RS2008 |
Unspecified |
scaffold7534 |
79658 |
80039 |
+ |
RS6506 |
Unspecified |
scaffold7534 |
80329 |
80351 |
+ |
(T)n |
Simple_repeat |
scaffold7534 |
80720 |
80761 |
+ |
(ATTTT)n |
Simple_repeat |
scaffold7534 |
86786 |
86839 |
+ |
(CTTTTT)n |
Simple_repeat |