scaffold7563 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold7563 |
478 |
509 |
+ |
(ACA)n |
Simple_repeat |
| scaffold7563 |
1163 |
1212 |
+ |
GA-rich |
Low_complexity |
| scaffold7563 |
1475 |
1511 |
+ |
GA-rich |
Low_complexity |
| scaffold7563 |
1559 |
1611 |
+ |
(TGT)n |
Simple_repeat |
| scaffold7563 |
1798 |
2008 |
- |
RS69 |
Unspecified |
| scaffold7563 |
2366 |
2672 |
+ |
RS427 |
Unspecified |
| scaffold7563 |
2670 |
2971 |
+ |
RS1419 |
Unspecified |
| scaffold7563 |
2995 |
3276 |
+ |
RS1755 |
Unspecified |
| scaffold7563 |
4082 |
4173 |
+ |
(TGATTT)n |
Simple_repeat |
| scaffold7563 |
4732 |
4876 |
- |
RS3249 |
Unspecified |
| scaffold7563 |
6618 |
6690 |
+ |
RS1419 |
Unspecified |
| scaffold7563 |
8191 |
8223 |
+ |
(TTGTTA)n |
Simple_repeat |
| scaffold7563 |
8408 |
8496 |
+ |
(TTA)n |
Simple_repeat |
| scaffold7563 |
9161 |
9314 |
+ |
RS13867 |
Unspecified |
| scaffold7563 |
9427 |
9456 |
+ |
(ATACAA)n |
Simple_repeat |
| scaffold7563 |
10058 |
10315 |
- |
RS11658 |
Unspecified |
| scaffold7563 |
10351 |
10472 |
- |
RS8384 |
Unspecified |
| scaffold7563 |
10665 |
10924 |
- |
RS237 |
Unspecified |
| scaffold7563 |
11340 |
11531 |
- |
RS908 |
Unspecified |
| scaffold7563 |
12334 |
12901 |
+ |
RS14190 |
Unspecified |
| scaffold7563 |
13451 |
13927 |
- |
ANGELA6_TM-int |
LTR/Copia |
| scaffold7563 |
14681 |
14734 |
+ |
GA-rich |
Low_complexity |
| scaffold7563 |
14750 |
14936 |
- |
RS383 |
Unspecified |
| scaffold7563 |
14934 |
15585 |
+ |
RS990 |
Unspecified |
| scaffold7563 |
15963 |
16022 |
+ |
(TTACTTT)n |
Simple_repeat |
| scaffold7563 |
16466 |
16500 |
+ |
(TATCTTT)n |
Simple_repeat |
| scaffold7563 |
16644 |
16669 |
+ |
(TGT)n |
Simple_repeat |
| scaffold7563 |
17352 |
17460 |
+ |
Gypsy-72_GM-I |
LTR/Gypsy |
| scaffold7563 |
17623 |
17718 |
+ |
RS6988 |
Unspecified |
| scaffold7563 |
18228 |
18276 |
+ |
Gypsy-119_GM-I |
LTR/Gypsy |
| scaffold7563 |
18645 |
18707 |
+ |
(TTACTTT)n |
Simple_repeat |
| scaffold7563 |
19148 |
19182 |
+ |
(TATCTTT)n |
Simple_repeat |
| scaffold7563 |
19347 |
19387 |
- |
RS1539 |
Unspecified |
| scaffold7563 |
19377 |
19468 |
+ |
RS990 |
Unspecified |
| scaffold7563 |
19468 |
19985 |
+ |
RS420 |
Unspecified |
| scaffold7563 |
21117 |
21964 |
- |
Copia-13_SB-I |
LTR/Copia |
| scaffold7563 |
21366 |
21964 |
- |
Copia-13_SB-I |
LTR/Copia |
| scaffold7563 |
21959 |
22277 |
+ |
RS348 |
Unspecified |
| scaffold7563 |
22255 |
23043 |
+ |
RS348 |
Unspecified |
| scaffold7563 |
23043 |
23762 |
- |
Copia-13_SB-I |
LTR/Copia |
| scaffold7563 |
24605 |
24795 |
- |
Gypsy-72_GM-I |
LTR/Gypsy |
| scaffold7563 |
24832 |
25179 |
- |
Gypsy-72_GM-I |
LTR/Gypsy |
| scaffold7563 |
25712 |
27038 |
- |
Copia-13_SB-I |
LTR/Copia |
| scaffold7563 |
27578 |
27794 |
- |
RS13321 |
Unspecified |
| scaffold7563 |
28995 |
29022 |
+ |
(ATAAA)n |
Simple_repeat |
| scaffold7563 |
29591 |
29781 |
- |
RS836 |
Unspecified |
| scaffold7563 |
29951 |
30061 |
+ |
RS420 |
Unspecified |
| scaffold7563 |
30834 |
30861 |
+ |
(ATAAA)n |
Simple_repeat |
| scaffold7563 |
31440 |
31630 |
- |
RS836 |
Unspecified |
| scaffold7563 |
31799 |
32884 |
- |
RS645 |
Unspecified |
| scaffold7563 |
33640 |
33676 |
+ |
(GCCG)n |
Simple_repeat |
| scaffold7563 |
34001 |
34344 |
- |
PL928 |
Unspecified |
| scaffold7563 |
34342 |
34623 |
- |
RS1160 |
Unspecified |
| scaffold7563 |
34626 |
34708 |
- |
RS3292 |
Unspecified |
| scaffold7563 |
34801 |
34839 |
+ |
(TAA)n |
Simple_repeat |
| scaffold7563 |
35224 |
35245 |
+ |
(A)n |
Simple_repeat |
| scaffold7563 |
35397 |
35445 |
+ |
(AATTAC)n |
Simple_repeat |
| scaffold7563 |
35531 |
37234 |
- |
RS260 |
Unspecified |
| scaffold7563 |
38872 |
38905 |
+ |
(GGACTA)n |
Simple_repeat |
| scaffold7563 |
41523 |
41594 |
+ |
(TGCTGA)n |
Simple_repeat |
| scaffold7563 |
42387 |
43415 |
+ |
RS2918 |
Unspecified |
| scaffold7563 |
43335 |
43474 |
+ |
RS6789 |
Unspecified |
| scaffold7563 |
43410 |
43545 |
+ |
RS6789 |
Unspecified |
| scaffold7563 |
43465 |
43842 |
- |
PL495 |
Unspecified |
| scaffold7563 |
43510 |
44654 |
- |
RS3063 |
Unspecified |
| scaffold7563 |
44064 |
44882 |
- |
PL921 |
Unspecified |
| scaffold7563 |
44422 |
45844 |
- |
PL554 |
Unspecified |
| scaffold7563 |
45983 |
46025 |
+ |
(TTTGT)n |
Simple_repeat |
| scaffold7563 |
46741 |
47443 |
- |
GYPSY3-I_MT |
LTR/Gypsy |
| scaffold7563 |
47816 |
49615 |
- |
gypsy |
gypsy(TransposonPSI) |
| scaffold7563 |
47925 |
48138 |
- |
Atlantys1_I-int |
LTR/Gypsy |
| scaffold7563 |
48123 |
49590 |
- |
Gypsy-I_MT |
LTR/Gypsy |
| scaffold7563 |
49737 |
49842 |
+ |
(GTTT)n |
Simple_repeat |
| scaffold7563 |
50025 |
50048 |
+ |
(TCT)n |
Simple_repeat |
| scaffold7563 |
50062 |
50127 |
+ |
(TGCT)n |
Simple_repeat |
| scaffold7563 |
53779 |
54777 |
+ |
PL124 |
Unspecified |
| scaffold7563 |
54959 |
56303 |
+ |
DEA1 |
LTR/Gypsy |
| scaffold7563 |
56548 |
57303 |
+ |
Gypsy-22_GM-I |
LTR/Gypsy |
| scaffold7563 |
59635 |
59683 |
+ |
(CTTCTAA)n |
Simple_repeat |
| scaffold7563 |
60163 |
60277 |
+ |
(AATTTA)n |
Simple_repeat |
| scaffold7563 |
60567 |
60629 |
+ |
RETROSAT5_I-int |
LTR/Gypsy |
| scaffold7563 |
60952 |
61017 |
+ |
(ATT)n |
Simple_repeat |
| scaffold7563 |
61183 |
61227 |
+ |
(ATTTTT)n |
Simple_repeat |
| scaffold7563 |
61335 |
61363 |
+ |
(TTGACTT)n |
Simple_repeat |
| scaffold7563 |
61445 |
61491 |
+ |
(AATTAA)n |
Simple_repeat |
| scaffold7563 |
61623 |
61735 |
+ |
RS69 |
Unspecified |
| scaffold7563 |
61742 |
61770 |
+ |
(TTGACTT)n |
Simple_repeat |
| scaffold7563 |
61852 |
61898 |
+ |
(AATTAA)n |
Simple_repeat |
| scaffold7563 |
62187 |
62226 |
+ |
A-rich |
Low_complexity |
| scaffold7563 |
63185 |
63195 |
+ |
(ATTTT)n |
Simple_repeat |
| scaffold7563 |
63196 |
63255 |
+ |
(TTTTGT)n |
Simple_repeat |
| scaffold7563 |
63256 |
63265 |
+ |
(ATTTT)n |
Simple_repeat |
| scaffold7563 |
63563 |
63600 |
+ |
(AATTAAG)n |
Simple_repeat |
| scaffold7563 |
64026 |
64169 |
+ |
(ATTTTAGAT)n |
Simple_repeat |
| scaffold7563 |
65363 |
65434 |
+ |
(ATGCTTAT)n |
Simple_repeat |