scaffold7916 Repeat List
genome |
start |
end |
strand |
repeat-name |
repeat-class |
scaffold7916 |
853 |
935 |
- |
MuDR-4_Mad |
DNA/MULE-MuDR |
scaffold7916 |
1343 |
1506 |
+ |
RS9968 |
Unspecified |
scaffold7916 |
2017 |
2305 |
+ |
(ATAA)n |
Simple_repeat |
scaffold7916 |
2272 |
2305 |
+ |
(ATAA)n |
Simple_repeat |
scaffold7916 |
2366 |
2460 |
- |
MuDR-3_GM |
DNA/MULE-MuDR |
scaffold7916 |
2625 |
2972 |
- |
MuDR-4_Mad |
DNA/MULE-MuDR |
scaffold7916 |
3462 |
4121 |
+ |
A-rich |
Low_complexity |
scaffold7916 |
3798 |
4121 |
+ |
A-rich |
Low_complexity |
scaffold7916 |
4274 |
4393 |
- |
cacta |
cacta(TransposonPSI) |
scaffold7916 |
4285 |
4322 |
+ |
(CCGCCGG)n |
Simple_repeat |
scaffold7916 |
4488 |
4584 |
- |
PL448 |
Unspecified |
scaffold7916 |
4583 |
4797 |
+ |
RS356 |
Unspecified |
scaffold7916 |
5062 |
5177 |
+ |
(CTCAT)n |
Simple_repeat |
scaffold7916 |
5135 |
5216 |
+ |
(TTC)n |
Simple_repeat |
scaffold7916 |
8178 |
8639 |
+ |
hAT-N16_ZM |
DNA/hAT-Ac |
scaffold7916 |
9477 |
9510 |
+ |
(TAT)n |
Simple_repeat |
scaffold7916 |
9520 |
9601 |
+ |
(AATTTTA)n |
Simple_repeat |
scaffold7916 |
10994 |
11021 |
+ |
(ATT)n |
Simple_repeat |
scaffold7916 |
11282 |
11326 |
+ |
A-rich |
Low_complexity |
scaffold7916 |
11368 |
11404 |
+ |
GA-rich |
Low_complexity |
scaffold7916 |
11515 |
11532 |
+ |
(T)n |
Simple_repeat |
scaffold7916 |
12050 |
12225 |
+ |
RS10837 |
Unspecified |
scaffold7916 |
12474 |
12502 |
+ |
(T)n |
Simple_repeat |
scaffold7916 |
13422 |
13498 |
+ |
(TGTTTTC)n |
Simple_repeat |
scaffold7916 |
14136 |
14319 |
+ |
RS11867 |
Unspecified |
scaffold7916 |
15063 |
15101 |
+ |
(ATTT)n |
Simple_repeat |
scaffold7916 |
15525 |
15600 |
+ |
(TGAAT)n |
Simple_repeat |
scaffold7916 |
15914 |
15951 |
+ |
(T)n |
Simple_repeat |
scaffold7916 |
17125 |
17241 |
+ |
(TTTCT)n |
Simple_repeat |
scaffold7916 |
17232 |
17241 |
+ |
(TTTCT)n |
Simple_repeat |
scaffold7916 |
17242 |
17274 |
+ |
(T)n |
Simple_repeat |
scaffold7916 |
17780 |
17909 |
+ |
RS16091 |
Unspecified |
scaffold7916 |
17834 |
18001 |
+ |
RS11668 |
Unspecified |
scaffold7916 |
18525 |
18707 |
- |
RS128 |
Unspecified |
scaffold7916 |
18903 |
18965 |
+ |
PL567 |
Unspecified |
scaffold7916 |
18910 |
18965 |
+ |
PL856 |
Unspecified |
scaffold7916 |
19218 |
19235 |
+ |
(T)n |
Simple_repeat |
scaffold7916 |
19413 |
19671 |
+ |
RS7052 |
Unspecified |
scaffold7916 |
20686 |
20866 |
+ |
RS3535 |
Unspecified |
scaffold7916 |
22307 |
22383 |
+ |
RS219 |
Unspecified |
scaffold7916 |
22828 |
22853 |
+ |
(T)n |
Simple_repeat |
scaffold7916 |
24493 |
24676 |
+ |
RS11867 |
Unspecified |
scaffold7916 |
25452 |
25479 |
+ |
(TTTA)n |
Simple_repeat |
scaffold7916 |
25893 |
25950 |
+ |
(TGAAT)n |
Simple_repeat |
scaffold7916 |
27500 |
27609 |
+ |
RS14148 |
Unspecified |
scaffold7916 |
28147 |
28278 |
+ |
RS16091 |
Unspecified |
scaffold7916 |
28202 |
28368 |
+ |
RS11668 |
Unspecified |
scaffold7916 |
28735 |
29188 |
+ |
PL402 |
Unspecified |
scaffold7916 |
29469 |
29510 |
+ |
(TTGAG)n |
Simple_repeat |
scaffold7916 |
29706 |
29969 |
+ |
RS240 |
Unspecified |
scaffold7916 |
30043 |
30226 |
+ |
RS178 |
Unspecified |
scaffold7916 |
30368 |
30626 |
+ |
RS7052 |
Unspecified |
scaffold7916 |
30959 |
31069 |
- |
RS54 |
Unspecified |
scaffold7916 |
31329 |
31347 |
+ |
(A)n |
Simple_repeat |
scaffold7916 |
31874 |
31906 |
+ |
(GGCGGT)n |
Simple_repeat |
scaffold7916 |
32066 |
32150 |
- |
TAM2_AM |
DNA/CMC-EnSpm |
scaffold7916 |
33837 |
33872 |
+ |
(GTGTTT)n |
Simple_repeat |
scaffold7916 |
37304 |
37665 |
- |
PL766 |
Unspecified |
scaffold7916 |
37666 |
37721 |
+ |
PL857 |
Unspecified |
scaffold7916 |
39050 |
39203 |
+ |
(AAAAT)n |
Simple_repeat |
scaffold7916 |
39050 |
39104 |
+ |
(AAAAT)n |
Simple_repeat |
scaffold7916 |
39091 |
39203 |
+ |
RS18280 |
Unspecified |
scaffold7916 |
39466 |
39507 |
+ |
(TTAA)n |
Simple_repeat |
scaffold7916 |
40268 |
40295 |
+ |
(T)n |
Simple_repeat |
scaffold7916 |
40412 |
40450 |
+ |
(TTAA)n |
Simple_repeat |
scaffold7916 |
40812 |
40840 |
+ |
(TA)n |
Simple_repeat |
scaffold7916 |
41027 |
41175 |
+ |
RS8690 |
Unspecified |
scaffold7916 |
41273 |
41324 |
+ |
ATLINEIII |
LINE/L1 |
scaffold7916 |
41279 |
41339 |
+ |
MuDR-N1_ZM |
DNA/MULE-MuDR |
scaffold7916 |
41457 |
41535 |
+ |
(CCGGAT)n |
Simple_repeat |
scaffold7916 |
42185 |
42246 |
- |
Copia-47_VV-I |
LTR/Copia |
scaffold7916 |
42193 |
42251 |
+ |
MuDR-N1_ZM |
DNA/MULE-MuDR |
scaffold7916 |
42482 |
42518 |
+ |
RS8690 |
Unspecified |
scaffold7916 |
42521 |
42588 |
+ |
RS8690 |
Unspecified |
scaffold7916 |
42664 |
42725 |
- |
Copia-47_VV-I |
LTR/Copia |
scaffold7916 |
42672 |
42793 |
+ |
MuDR-N1_ZM |
DNA/MULE-MuDR |
scaffold7916 |
42882 |
42908 |
+ |
(A)n |
Simple_repeat |
scaffold7916 |
42991 |
43223 |
- |
RS4 |
Unspecified |
scaffold7916 |
43545 |
44141 |
+ |
RS132 |
Unspecified |
scaffold7916 |
45487 |
45749 |
+ |
RS365 |
Unspecified |
scaffold7916 |
45984 |
46013 |
+ |
A-rich |
Low_complexity |
scaffold7916 |
46366 |
46493 |
- |
PL271 |
Unspecified |
scaffold7916 |
46492 |
46639 |
- |
RS3218 |
Unspecified |
scaffold7916 |
47240 |
47293 |
+ |
A-rich |
Low_complexity |
scaffold7916 |
47422 |
47474 |
+ |
(A)n |
Simple_repeat |
scaffold7916 |
47916 |
47944 |
+ |
(ATG)n |
Simple_repeat |
scaffold7916 |
51463 |
51521 |
+ |
(AAT)n |
Simple_repeat |
scaffold7916 |
51522 |
51530 |
+ |
(ATAATTA)n |
Simple_repeat |
scaffold7916 |
51576 |
51638 |
+ |
(TATTTTA)n |
Simple_repeat |
scaffold7916 |
52348 |
52440 |
- |
RS10491 |
Unspecified |
scaffold7916 |
54092 |
54113 |
+ |
(ATGA)n |
Simple_repeat |
scaffold7916 |
54308 |
54338 |
+ |
(TATATA)n |
Simple_repeat |
scaffold7916 |
54339 |
54359 |
+ |
(ATA)n |
Simple_repeat |
scaffold7916 |
54358 |
54621 |
- |
RS356 |
Unspecified |
scaffold7916 |
54620 |
54653 |
+ |
(TAA)n |
Simple_repeat |
scaffold7916 |
55210 |
55239 |
+ |
(TTTAG)n |
Simple_repeat |
scaffold7916 |
55260 |
55374 |
- |
RS16382 |
Unspecified |
scaffold7916 |
56472 |
56562 |
+ |
RS4200 |
Unspecified |
scaffold7916 |
57216 |
57234 |
+ |
(A)n |
Simple_repeat |
scaffold7916 |
58762 |
58784 |
+ |
(CGT)n |
Simple_repeat |
scaffold7916 |
59052 |
59121 |
+ |
RS622 |
Unspecified |
scaffold7916 |
59146 |
59255 |
+ |
(TTCAG)n |
Simple_repeat |
scaffold7916 |
59284 |
59330 |
- |
RS14977 |
Unspecified |
scaffold7916 |
60746 |
60834 |
+ |
RS16382 |
Unspecified |
scaffold7916 |
61793 |
61832 |
+ |
A-rich |
Low_complexity |
scaffold7916 |
61922 |
62023 |
+ |
PL436 |
Unspecified |
scaffold7916 |
61939 |
62034 |
- |
RS4475 |
Unspecified |
scaffold7916 |
62216 |
62315 |
+ |
RS10063 |
Unspecified |
scaffold7916 |
63589 |
63660 |
+ |
(TTCAG)n |
Simple_repeat |
scaffold7916 |
63679 |
63866 |
+ |
(ATT)n |
Simple_repeat |
scaffold7916 |
64517 |
64615 |
+ |
(AAT)n |
Simple_repeat |
scaffold7916 |
64644 |
64747 |
+ |
(TTCAG)n |
Simple_repeat |
scaffold7916 |
65375 |
65442 |
- |
L1-4_Mad |
LINE/L1 |
scaffold7916 |
66534 |
66595 |
- |
RS4863 |
Unspecified |
scaffold7916 |
66596 |
66641 |
+ |
(A)n |
Simple_repeat |
scaffold7916 |
67231 |
67286 |
+ |
(ATTA)n |
Simple_repeat |
scaffold7916 |
68303 |
68634 |
+ |
PL809 |
Unspecified |
scaffold7916 |
68633 |
68775 |
- |
RS622 |
Unspecified |
scaffold7916 |
68708 |
68787 |
- |
RS18022 |
Unspecified |
scaffold7916 |
69057 |
69165 |
+ |
HAT-N9_Mad |
DNA/hAT-Ac |
scaffold7916 |
69565 |
69781 |
+ |
Copia-3_PTri-I |
LTR/Copia |
scaffold7916 |
71596 |
71823 |
+ |
(TTCAG)n |
Simple_repeat |
scaffold7916 |
72251 |
72268 |
+ |
(TATTA)n |
Simple_repeat |
scaffold7916 |
72269 |
72298 |
+ |
(T)n |
Simple_repeat |
scaffold7916 |
72299 |
72308 |
+ |
(TATTA)n |
Simple_repeat |
scaffold7916 |
72364 |
72431 |
+ |
(ATCCAA)n |
Simple_repeat |
scaffold7916 |
73811 |
73881 |
+ |
(TTA)n |
Simple_repeat |
scaffold7916 |
73885 |
73950 |
+ |
(CTTCA)n |
Simple_repeat |
scaffold7916 |
73978 |
74008 |
+ |
(CAA)n |
Simple_repeat |
scaffold7916 |
74225 |
74246 |
+ |
(T)n |
Simple_repeat |
scaffold7916 |
74338 |
74369 |
+ |
(T)n |
Simple_repeat |
scaffold7916 |
74766 |
74822 |
+ |
(T)n |
Simple_repeat |
scaffold7916 |
75042 |
75079 |
+ |
A-rich |
Low_complexity |
scaffold7916 |
75108 |
75157 |
+ |
(TAAT)n |
Simple_repeat |
scaffold7916 |
75801 |
75898 |
- |
RS4475 |
Unspecified |
scaffold7916 |
75985 |
76020 |
+ |
(TATACA)n |
Simple_repeat |
scaffold7916 |
76903 |
77113 |
- |
Copia-3_PTri-I |
LTR/Copia |
scaffold7916 |
77114 |
77186 |
- |
Copia-3_PTri-I |
LTR/Copia |
scaffold7916 |
77849 |
78060 |
- |
Copia-3_PTri-I |
LTR/Copia |
scaffold7916 |
78085 |
78176 |
+ |
Copia-3_PTri-I |
LTR/Copia |
scaffold7916 |
79387 |
79606 |
+ |
(AACTG)n |
Simple_repeat |
scaffold7916 |
79787 |
80149 |
- |
PL683 |
Unspecified |
scaffold7916 |
80621 |
80689 |
+ |
RS16831 |
Unspecified |
scaffold7916 |
80630 |
80800 |
- |
RS47 |
Unspecified |
scaffold7916 |
81684 |
81773 |
+ |
(TTATAAT)n |
Simple_repeat |
scaffold7916 |
83986 |
84245 |
+ |
RS384 |
Unspecified |
scaffold7916 |
84454 |
84489 |
+ |
(ATT)n |
Simple_repeat |
scaffold7916 |
84564 |
84707 |
- |
RS1082 |
Unspecified |
scaffold7916 |
85942 |
85976 |
+ |
(TAA)n |
Simple_repeat |
scaffold7916 |
87012 |
87046 |
+ |
(TATT)n |
Simple_repeat |
scaffold7916 |
87426 |
87449 |
+ |
(T)n |
Simple_repeat |
scaffold7916 |
87859 |
87893 |
+ |
(TAA)n |
Simple_repeat |
scaffold7916 |
88367 |
88616 |
- |
RS16888 |
Unspecified |
scaffold7916 |
88718 |
88751 |
+ |
(CGACC)n |
Simple_repeat |
scaffold7916 |
89733 |
89756 |
+ |
(A)n |
Simple_repeat |
scaffold7916 |
89954 |
90294 |
- |
RS1324 |
Unspecified |
scaffold7916 |
90347 |
90474 |
- |
RS1324 |
Unspecified |
scaffold7916 |
90604 |
90648 |
+ |
(TTTTAT)n |
Simple_repeat |
scaffold7916 |
91115 |
91139 |
+ |
(T)n |
Simple_repeat |
scaffold7916 |
91276 |
91309 |
+ |
GA-rich |
Low_complexity |
scaffold7916 |
92626 |
92697 |
+ |
A-rich |
Low_complexity |
scaffold7916 |
93241 |
93546 |
- |
RS155 |
Unspecified |
scaffold7916 |
93754 |
93776 |
+ |
(T)n |
Simple_repeat |
scaffold7916 |
94113 |
94197 |
+ |
LTR-7_Mad-LTR |
LTR |
scaffold7916 |
94588 |
94720 |
- |
TRAMET1 |
DNA/TcMar-Stowaway |
scaffold7916 |
95575 |
95597 |
+ |
(A)n |
Simple_repeat |
scaffold7916 |
95896 |
96027 |
- |
RS4 |
Unspecified |