scaffold7918 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold7918 |
31 |
163 |
+ |
RS912 |
Unspecified |
| scaffold7918 |
275 |
593 |
+ |
RS852 |
Unspecified |
| scaffold7918 |
650 |
683 |
+ |
(AATTT)n |
Simple_repeat |
| scaffold7918 |
726 |
909 |
- |
RS7866 |
Unspecified |
| scaffold7918 |
869 |
953 |
- |
RS14568 |
Unspecified |
| scaffold7918 |
1107 |
1157 |
+ |
(GA)n |
Simple_repeat |
| scaffold7918 |
1328 |
1378 |
+ |
(TA)n |
Simple_repeat |
| scaffold7918 |
3722 |
4080 |
+ |
(TA)n |
Simple_repeat |
| scaffold7918 |
3722 |
3810 |
+ |
(TA)n |
Simple_repeat |
| scaffold7918 |
3789 |
4080 |
- |
RS2015 |
Unspecified |
| scaffold7918 |
4028 |
4193 |
- |
RS2015 |
Unspecified |
| scaffold7918 |
4454 |
4479 |
+ |
(AAAATA)n |
Simple_repeat |
| scaffold7918 |
4540 |
4566 |
+ |
(TAAA)n |
Simple_repeat |
| scaffold7918 |
4697 |
4726 |
+ |
(CAC)n |
Simple_repeat |
| scaffold7918 |
4740 |
4916 |
- |
RS6996 |
Unspecified |
| scaffold7918 |
4769 |
4954 |
- |
RS5819 |
Unspecified |
| scaffold7918 |
4872 |
5178 |
+ |
RS138 |
Unspecified |
| scaffold7918 |
5309 |
5528 |
- |
Copia-3_PTri-I |
LTR/Copia |
| scaffold7918 |
5812 |
6859 |
+ |
PL326 |
Unspecified |
| scaffold7918 |
7311 |
7903 |
+ |
RS1132 |
Unspecified |
| scaffold7918 |
7891 |
8056 |
+ |
(TATTTA)n |
Simple_repeat |
| scaffold7918 |
7970 |
8056 |
+ |
(TATTTA)n |
Simple_repeat |
| scaffold7918 |
8443 |
8474 |
+ |
(T)n |
Simple_repeat |
| scaffold7918 |
8481 |
8546 |
+ |
RS942 |
Unspecified |
| scaffold7918 |
8518 |
8629 |
+ |
RS942 |
Unspecified |
| scaffold7918 |
8697 |
8949 |
+ |
RS2720 |
Unspecified |
| scaffold7918 |
8879 |
9042 |
+ |
RS1174 |
Unspecified |
| scaffold7918 |
9063 |
9145 |
- |
RS2333 |
Unspecified |
| scaffold7918 |
9257 |
9420 |
+ |
RS1174 |
Unspecified |
| scaffold7918 |
9329 |
9438 |
+ |
RS175 |
Unspecified |
| scaffold7918 |
9434 |
9481 |
- |
RS2333 |
Unspecified |
| scaffold7918 |
9522 |
10060 |
- |
RS3695 |
Unspecified |
| scaffold7918 |
9654 |
10165 |
+ |
GA-rich |
Low_complexity |
| scaffold7918 |
10092 |
10165 |
+ |
GA-rich |
Low_complexity |
| scaffold7918 |
10218 |
10306 |
+ |
RS588 |
Unspecified |
| scaffold7918 |
10310 |
10393 |
+ |
RS624 |
Unspecified |
| scaffold7918 |
10979 |
11036 |
+ |
(TATTTG)n |
Simple_repeat |
| scaffold7918 |
10979 |
11145 |
+ |
(TATTTG)n |
Simple_repeat |
| scaffold7918 |
11024 |
11145 |
- |
RS2056 |
Unspecified |
| scaffold7918 |
11532 |
11834 |
- |
RS8222 |
Unspecified |
| scaffold7918 |
12318 |
12406 |
- |
RS9033 |
Unspecified |
| scaffold7918 |
12636 |
12676 |
+ |
Copia-3_PTri-I |
LTR/Copia |
| scaffold7918 |
12677 |
12705 |
+ |
(CTCACCA)n |
Simple_repeat |
| scaffold7918 |
12706 |
12876 |
+ |
Copia-3_PTri-I |
LTR/Copia |
| scaffold7918 |
13506 |
13531 |
+ |
(A)n |
Simple_repeat |
| scaffold7918 |
13682 |
13738 |
+ |
PL481 |
Unspecified |
| scaffold7918 |
13761 |
14013 |
+ |
RS356 |
Unspecified |
| scaffold7918 |
14072 |
14117 |
+ |
A-rich |
Low_complexity |
| scaffold7918 |
15085 |
15112 |
+ |
(A)n |
Simple_repeat |
| scaffold7918 |
16704 |
16755 |
+ |
(ACAACC)n |
Simple_repeat |
| scaffold7918 |
17166 |
17228 |
+ |
(TTCA)n |
Simple_repeat |
| scaffold7918 |
17534 |
17745 |
- |
PL309 |
Unspecified |
| scaffold7918 |
17780 |
17796 |
+ |
(A)n |
Simple_repeat |
| scaffold7918 |
17951 |
17979 |
+ |
(T)n |
Simple_repeat |
| scaffold7918 |
18296 |
18380 |
+ |
(ATTGATA)n |
Simple_repeat |
| scaffold7918 |
18484 |
18715 |
+ |
RS15131 |
Unspecified |
| scaffold7918 |
18721 |
19228 |
- |
PL807 |
Unspecified |
| scaffold7918 |
19437 |
19567 |
- |
ATENSPM1 |
DNA/CMC-EnSpm |
| scaffold7918 |
19619 |
19722 |
+ |
RS507 |
Unspecified |
| scaffold7918 |
20185 |
20273 |
- |
LTR-7_Mad-LTR |
LTR |
| scaffold7918 |
21330 |
21428 |
+ |
RS12449 |
Unspecified |
| scaffold7918 |
22313 |
22516 |
- |
RS549 |
Unspecified |
| scaffold7918 |
22512 |
23019 |
+ |
RS554 |
Unspecified |
| scaffold7918 |
23038 |
23059 |
+ |
(A)n |
Simple_repeat |
| scaffold7918 |
23076 |
23119 |
+ |
(CCCAA)n |
Simple_repeat |
| scaffold7918 |
24644 |
24818 |
+ |
(CCCGA)n |
Simple_repeat |
| scaffold7918 |
24978 |
25154 |
+ |
(CCCGA)n |
Simple_repeat |
| scaffold7918 |
25164 |
25217 |
+ |
RS600 |
Unspecified |
| scaffold7918 |
25842 |
25905 |
+ |
(TTAAT)n |
Simple_repeat |
| scaffold7918 |
25931 |
26252 |
+ |
RS600 |
Unspecified |
| scaffold7918 |
27470 |
27544 |
+ |
Copia-2_SL-LTR |
LTR/Copia |
| scaffold7918 |
28007 |
28111 |
+ |
(ATA)n |
Simple_repeat |
| scaffold7918 |
28894 |
28920 |
+ |
(TAA)n |
Simple_repeat |
| scaffold7918 |
32787 |
32844 |
+ |
RS600 |
Unspecified |
| scaffold7918 |
32838 |
33035 |
+ |
RS600 |
Unspecified |
| scaffold7918 |
33363 |
33395 |
+ |
(ATTT)n |
Simple_repeat |
| scaffold7918 |
34201 |
34235 |
+ |
A-rich |
Low_complexity |
| scaffold7918 |
35373 |
35962 |
+ |
(GTT)n |
Simple_repeat |
| scaffold7918 |
35915 |
35963 |
+ |
(T)n |
Simple_repeat |
| scaffold7918 |
36493 |
36520 |
+ |
(ATAAT)n |
Simple_repeat |
| scaffold7918 |
36585 |
36622 |
+ |
(A)n |
Simple_repeat |
| scaffold7918 |
37223 |
37246 |
+ |
(TCC)n |
Simple_repeat |
| scaffold7918 |
37371 |
37393 |
+ |
(TTC)n |
Simple_repeat |
| scaffold7918 |
37455 |
37512 |
+ |
(CAA)n |
Simple_repeat |
| scaffold7918 |
38001 |
38173 |
+ |
RS2803 |
Unspecified |
| scaffold7918 |
38523 |
38601 |
+ |
RS17326 |
Unspecified |
| scaffold7918 |
38532 |
38601 |
+ |
RS15470 |
Unspecified |
| scaffold7918 |
38680 |
38758 |
+ |
(GATATCC)n |
Simple_repeat |
| scaffold7918 |
38845 |
38899 |
+ |
(TTATAA)n |
Simple_repeat |
| scaffold7918 |
39070 |
40404 |
+ |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold7918 |
39703 |
40053 |
- |
Copia-77_SB-I |
LTR/Copia |
| scaffold7918 |
39826 |
40205 |
+ |
Copia-77_SB-I |
LTR/Copia |
| scaffold7918 |
40397 |
41551 |
+ |
RS2012 |
Unspecified |
| scaffold7918 |
41780 |
42377 |
+ |
PL411 |
Unspecified |
| scaffold7918 |
42146 |
42415 |
+ |
RS11325 |
Unspecified |
| scaffold7918 |
43354 |
43494 |
- |
RS1210 |
Unspecified |
| scaffold7918 |
43940 |
44006 |
+ |
(TTCTT)n |
Simple_repeat |
| scaffold7918 |
44718 |
44760 |
+ |
A-rich |
Low_complexity |
| scaffold7918 |
44992 |
45049 |
+ |
(TCA)n |
Simple_repeat |
| scaffold7918 |
45285 |
45802 |
- |
Gypsy1-PTR_I-int |
LTR/Gypsy |
| scaffold7918 |
46544 |
46574 |
+ |
(TTG)n |
Simple_repeat |
| scaffold7918 |
47052 |
47505 |
- |
Gypsy1-PTR_I-int |
LTR/Gypsy |
| scaffold7918 |
47858 |
49047 |
+ |
RS2012 |
Unspecified |
| scaffold7918 |
49045 |
49349 |
+ |
RS3677 |
Unspecified |
| scaffold7918 |
49466 |
49681 |
- |
RS22 |
Unspecified |
| scaffold7918 |
49672 |
49896 |
- |
RS2217 |
Unspecified |
| scaffold7918 |
50256 |
50482 |
- |
RS2604 |
Unspecified |
| scaffold7918 |
50431 |
51109 |
- |
RS346 |
Unspecified |
| scaffold7918 |
51359 |
51402 |
+ |
(T)n |
Simple_repeat |
| scaffold7918 |
52133 |
52194 |
+ |
(TTCTCT)n |
Simple_repeat |
| scaffold7918 |
53398 |
53428 |
+ |
(CAAAA)n |
Simple_repeat |
| scaffold7918 |
54117 |
54178 |
+ |
A-rich |
Low_complexity |
| scaffold7918 |
54227 |
54302 |
+ |
(AAGGAAT)n |
Simple_repeat |
| scaffold7918 |
55008 |
55059 |
+ |
(TAATCA)n |
Simple_repeat |
| scaffold7918 |
56110 |
56566 |
- |
RS2217 |
Unspecified |
| scaffold7918 |
56709 |
56729 |
+ |
(A)n |
Simple_repeat |
| scaffold7918 |
57585 |
57811 |
- |
RS2604 |
Unspecified |
| scaffold7918 |
57821 |
58054 |
+ |
RS2012 |
Unspecified |
| scaffold7918 |
58055 |
58225 |
+ |
Copia-13_Mad-I |
LTR/Copia |
| scaffold7918 |
58242 |
58361 |
+ |
RS640 |
Unspecified |
| scaffold7918 |
58362 |
58613 |
+ |
RS734 |
Unspecified |
| scaffold7918 |
58800 |
58886 |
+ |
(CAC)n |
Simple_repeat |
| scaffold7918 |
59174 |
59238 |
+ |
(TTTCAG)n |
Simple_repeat |
| scaffold7918 |
59744 |
59781 |
+ |
(TAAT)n |
Simple_repeat |
| scaffold7918 |
59800 |
61354 |
- |
Copia-73_PT-I |
LTR/Copia |
| scaffold7918 |
61432 |
61470 |
+ |
GA-rich |
Low_complexity |
| scaffold7918 |
61792 |
62627 |
- |
Copia-15_Mad-I |
LTR/Copia |
| scaffold7918 |
63056 |
63125 |
- |
Copia-15_Mad-I |
LTR/Copia |
| scaffold7918 |
63440 |
64309 |
- |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold7918 |
63964 |
64303 |
- |
Copia-15_Mad-I |
LTR/Copia |
| scaffold7918 |
65063 |
65100 |
+ |
(TAAT)n |
Simple_repeat |
| scaffold7918 |
66000 |
66054 |
+ |
(TGT)n |
Simple_repeat |