scaffold793 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold793 |
1 |
330 |
+ |
RS4409 |
Unspecified |
| scaffold793 |
502 |
730 |
+ |
RS5523 |
Unspecified |
| scaffold793 |
840 |
996 |
+ |
(ACA)n |
Simple_repeat |
| scaffold793 |
1208 |
1252 |
+ |
(ACAT)n |
Simple_repeat |
| scaffold793 |
1682 |
1782 |
+ |
(TGA)n |
Simple_repeat |
| scaffold793 |
2429 |
2558 |
+ |
(ATG)n |
Simple_repeat |
| scaffold793 |
2690 |
2855 |
+ |
(TTA)n |
Simple_repeat |
| scaffold793 |
3991 |
4040 |
+ |
(TTAGTTT)n |
Simple_repeat |
| scaffold793 |
4605 |
4659 |
+ |
A-rich |
Low_complexity |
| scaffold793 |
4891 |
4959 |
+ |
(CAT)n |
Simple_repeat |
| scaffold793 |
5118 |
5708 |
- |
PIGY-I_PS |
LTR/Gypsy |
| scaffold793 |
5959 |
6605 |
+ |
RS661 |
Unspecified |
| scaffold793 |
6071 |
6700 |
+ |
RS1207 |
Unspecified |
| scaffold793 |
6932 |
7103 |
- |
PIGY-LTR_PS |
LTR/Gypsy |
| scaffold793 |
7665 |
7712 |
+ |
A-rich |
Low_complexity |
| scaffold793 |
9142 |
9270 |
- |
RS51 |
Unspecified |
| scaffold793 |
10536 |
10558 |
+ |
(GT)n |
Simple_repeat |
| scaffold793 |
12207 |
12954 |
- |
RS1061 |
Unspecified |
| scaffold793 |
12682 |
13138 |
+ |
RS2909 |
Unspecified |
| scaffold793 |
13007 |
13361 |
- |
RS401 |
Unspecified |
| scaffold793 |
13799 |
14268 |
+ |
PL604 |
Unspecified |
| scaffold793 |
17366 |
17419 |
+ |
(TTTTA)n |
Simple_repeat |
| scaffold793 |
17439 |
17721 |
- |
RS51 |
Unspecified |
| scaffold793 |
17717 |
18170 |
- |
RS101 |
Unspecified |
| scaffold793 |
20677 |
21162 |
- |
RS2383 |
Unspecified |
| scaffold793 |
21158 |
21667 |
- |
RS23 |
Unspecified |
| scaffold793 |
22032 |
22060 |
+ |
(ACA)n |
Simple_repeat |
| scaffold793 |
22659 |
23322 |
+ |
MEGY-I_MT |
LTR/Gypsy |
| scaffold793 |
23505 |
25238 |
- |
RS572 |
Unspecified |
| scaffold793 |
25665 |
25701 |
+ |
(TGGTCC)n |
Simple_repeat |
| scaffold793 |
26113 |
26159 |
+ |
(GGTTTT)n |
Simple_repeat |
| scaffold793 |
27785 |
28891 |
- |
RS3148 |
Unspecified |
| scaffold793 |
29182 |
30187 |
+ |
RS1447 |
Unspecified |
| scaffold793 |
30285 |
30511 |
- |
RS454 |
Unspecified |
| scaffold793 |
31210 |
31275 |
+ |
A-rich |
Low_complexity |
| scaffold793 |
31963 |
32010 |
+ |
(CGTGTTT)n |
Simple_repeat |
| scaffold793 |
32435 |
34057 |
+ |
gypsy |
gypsy(TransposonPSI) |
| scaffold793 |
32631 |
33957 |
+ |
PEABODY_I-int |
LTR/Gypsy |
| scaffold793 |
34117 |
34842 |
+ |
PEABODY_I-int |
LTR/Gypsy |
| scaffold793 |
37159 |
37218 |
- |
Gypsy-26_ST-I |
LTR/Gypsy |
| scaffold793 |
37231 |
38535 |
- |
RS184 |
Unspecified |
| scaffold793 |
38533 |
38703 |
+ |
PL643 |
Unspecified |
| scaffold793 |
41524 |
42510 |
+ |
RS412 |
Unspecified |
| scaffold793 |
42502 |
43495 |
+ |
PL530 |
Unspecified |
| scaffold793 |
43680 |
43731 |
+ |
(TTTATG)n |
Simple_repeat |
| scaffold793 |
43795 |
44613 |
+ |
RS323 |
Unspecified |
| scaffold793 |
44788 |
44808 |
+ |
(TAGT)n |
Simple_repeat |
| scaffold793 |
44879 |
45092 |
+ |
RS1207 |
Unspecified |
| scaffold793 |
45324 |
45495 |
- |
PIGY-LTR_PS |
LTR/Gypsy |
| scaffold793 |
47567 |
47660 |
+ |
(TCA)n |
Simple_repeat |
| scaffold793 |
48509 |
48967 |
- |
RS785 |
Unspecified |
| scaffold793 |
48839 |
49638 |
+ |
RS602 |
Unspecified |
| scaffold793 |
49464 |
49763 |
- |
RS1026 |
Unspecified |
| scaffold793 |
49913 |
49967 |
+ |
(TTGACC)n |
Simple_repeat |
| scaffold793 |
50680 |
52101 |
- |
Ogre-MT3_I-int |
LTR/Gypsy |
| scaffold793 |
50680 |
50761 |
- |
Ogre-MT3_I-int |
LTR/Gypsy |
| scaffold793 |
50752 |
52101 |
- |
RS699 |
Unspecified |
| scaffold793 |
52792 |
52832 |
+ |
A-rich |
Low_complexity |
| scaffold793 |
54065 |
54380 |
+ |
RS6639 |
Unspecified |
| scaffold793 |
54533 |
54566 |
+ |
(T)n |
Simple_repeat |
| scaffold793 |
54777 |
55023 |
- |
RS12439 |
Unspecified |
| scaffold793 |
55317 |
55344 |
+ |
(T)n |
Simple_repeat |
| scaffold793 |
55520 |
55549 |
+ |
A-rich |
Low_complexity |
| scaffold793 |
55585 |
55777 |
+ |
(GAACT)n |
Simple_repeat |
| scaffold793 |
56262 |
56294 |
+ |
(T)n |
Simple_repeat |
| scaffold793 |
56470 |
56500 |
+ |
A-rich |
Low_complexity |
| scaffold793 |
56536 |
56728 |
+ |
(GAACT)n |
Simple_repeat |
| scaffold793 |
58373 |
58726 |
+ |
RS58 |
Unspecified |
| scaffold793 |
58988 |
59141 |
- |
RS10607 |
Unspecified |
| scaffold793 |
61621 |
61676 |
+ |
(CCTCGC)n |
Simple_repeat |
| scaffold793 |
62058 |
62075 |
+ |
(T)n |
Simple_repeat |
| scaffold793 |
65305 |
65462 |
+ |
Copia-3_PTri-I |
LTR/Copia |
| scaffold793 |
66201 |
66230 |
+ |
(ATGT)n |
Simple_repeat |
| scaffold793 |
66689 |
66911 |
+ |
(CAGTT)n |
Simple_repeat |
| scaffold793 |
66992 |
67031 |
+ |
(GACTT)n |
Simple_repeat |
| scaffold793 |
67319 |
67551 |
- |
RS3554 |
Unspecified |
| scaffold793 |
67368 |
67628 |
- |
RS7289 |
Unspecified |
| scaffold793 |
67698 |
68079 |
- |
RS11698 |
Unspecified |
| scaffold793 |
68101 |
68140 |
+ |
(AATAATT)n |
Simple_repeat |
| scaffold793 |
69454 |
69474 |
+ |
(A)n |
Simple_repeat |
| scaffold793 |
69520 |
69541 |
+ |
(T)n |
Simple_repeat |
| scaffold793 |
70066 |
70157 |
+ |
LTR-7_Mad-LTR |
LTR |
| scaffold793 |
72004 |
72267 |
+ |
RS9507 |
Unspecified |
| scaffold793 |
75022 |
75217 |
- |
RS8108 |
Unspecified |
| scaffold793 |
76701 |
76728 |
+ |
(T)n |
Simple_repeat |
| scaffold793 |
76863 |
76897 |
+ |
A-rich |
Low_complexity |
| scaffold793 |
79512 |
79552 |
+ |
(A)n |
Simple_repeat |
| scaffold793 |
86432 |
86459 |
+ |
(A)n |
Simple_repeat |
| scaffold793 |
87778 |
87925 |
+ |
RS6162 |
Unspecified |
| scaffold793 |
87939 |
87989 |
+ |
(ACCAA)n |
Simple_repeat |
| scaffold793 |
88285 |
88334 |
+ |
(ATT)n |
Simple_repeat |
| scaffold793 |
88717 |
88890 |
- |
RS9683 |
Unspecified |
| scaffold793 |
89621 |
89658 |
+ |
A-rich |
Low_complexity |
| scaffold793 |
89733 |
89787 |
+ |
(AATT)n |
Simple_repeat |
| scaffold793 |
89825 |
89891 |
+ |
HAT-N10_Mad |
DNA/hAT-Ac |
| scaffold793 |
90646 |
90693 |
+ |
HAT-N10_Mad |
DNA/hAT-Ac |
| scaffold793 |
90706 |
90734 |
+ |
(T)n |
Simple_repeat |
| scaffold793 |
90890 |
91269 |
- |
RS1632 |
Unspecified |
| scaffold793 |
91422 |
91475 |
+ |
RS8312 |
Unspecified |
| scaffold793 |
91448 |
91576 |
+ |
RS8312 |
Unspecified |
| scaffold793 |
91561 |
91693 |
+ |
RS8312 |
Unspecified |
| scaffold793 |
91611 |
92207 |
- |
RS439 |
Unspecified |
| scaffold793 |
92372 |
92687 |
+ |
RS6506 |
Unspecified |
| scaffold793 |
92668 |
92697 |
- |
RS6506 |
Unspecified |
| scaffold793 |
93329 |
93377 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold793 |
94472 |
94625 |
+ |
(ATCCGAT)n |
Simple_repeat |
| scaffold793 |
95688 |
95709 |
+ |
(T)n |
Simple_repeat |
| scaffold793 |
95798 |
95843 |
+ |
(AATA)n |
Simple_repeat |
| scaffold793 |
96003 |
96029 |
+ |
(ATG)n |
Simple_repeat |
| scaffold793 |
96030 |
96071 |
- |
SHALINE2_MT |
LINE/L1 |
| scaffold793 |
96072 |
96148 |
+ |
(ATA)n |
Simple_repeat |
| scaffold793 |
96149 |
96161 |
- |
SHALINE2_MT |
LINE/L1 |
| scaffold793 |
96242 |
96372 |
+ |
(TAA)n |
Simple_repeat |
| scaffold793 |
97079 |
97610 |
- |
RS8102 |
Unspecified |
| scaffold793 |
98130 |
98307 |
+ |
ATIS112A |
DNA/PIF-Harbinger |
| scaffold793 |
98317 |
98744 |
- |
PL565 |
Unspecified |
| scaffold793 |
98765 |
99199 |
+ |
HARB-5_SBi |
DNA/PIF-Harbinger |
| scaffold793 |
99492 |
99620 |
+ |
(TTGAAT)n |
Simple_repeat |
| scaffold793 |
99665 |
99879 |
- |
RS1079 |
Unspecified |
| scaffold793 |
99822 |
100454 |
- |
RS1761 |
Unspecified |
| scaffold793 |
99995 |
100535 |
- |
RS2302 |
Unspecified |
| scaffold793 |
100581 |
101066 |
+ |
RS1445 |
Unspecified |
| scaffold793 |
101066 |
101453 |
- |
RS2778 |
Unspecified |
| scaffold793 |
101584 |
101616 |
+ |
A-rich |
Low_complexity |
| scaffold793 |
102440 |
102521 |
+ |
(TTG)n |
Simple_repeat |
| scaffold793 |
102510 |
102543 |
+ |
(TTTTA)n |
Simple_repeat |
| scaffold793 |
102522 |
102542 |
+ |
(TTTGTT)n |
Simple_repeat |
| scaffold793 |
102756 |
102854 |
+ |
(ATAATTT)n |
Simple_repeat |
| scaffold793 |
103141 |
103178 |
+ |
(AATTA)n |
Simple_repeat |
| scaffold793 |
103946 |
104010 |
- |
DIASPORA_I-int |
LTR/Gypsy |
| scaffold793 |
104183 |
104374 |
- |
RS12496 |
Unspecified |
| scaffold793 |
104544 |
105157 |
+ |
RS3897 |
Unspecified |
| scaffold793 |
105328 |
105493 |
+ |
RS42 |
Unspecified |
| scaffold793 |
107431 |
108192 |
- |
PL510 |
Unspecified |
| scaffold793 |
107568 |
108775 |
- |
RS1941 |
Unspecified |
| scaffold793 |
109188 |
109204 |
+ |
(AC)n |
Simple_repeat |
| scaffold793 |
109454 |
109495 |
+ |
(T)n |
Simple_repeat |
| scaffold793 |
109603 |
109688 |
+ |
(T)n |
Simple_repeat |
| scaffold793 |
109689 |
109713 |
+ |
(GTTT)n |
Simple_repeat |
| scaffold793 |
109880 |
109901 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold793 |
110342 |
110374 |
+ |
A-rich |
Low_complexity |
| scaffold793 |
111362 |
111436 |
+ |
Gypsy-72-LTR_ZM |
LTR/Gypsy |
| scaffold793 |
111683 |
111858 |
- |
RS890 |
Unspecified |
| scaffold793 |
111920 |
111943 |
+ |
(ATA)n |
Simple_repeat |
| scaffold793 |
112025 |
112031 |
+ |
(ATCAAC)n |
Simple_repeat |
| scaffold793 |
112032 |
112075 |
+ |
(AAC)n |
Simple_repeat |
| scaffold793 |
112076 |
112131 |
+ |
(ATCAAC)n |
Simple_repeat |
| scaffold793 |
112096 |
112145 |
+ |
(TCAA)n |
Simple_repeat |
| scaffold793 |
112502 |
112541 |
+ |
(CAATCT)n |
Simple_repeat |
| scaffold793 |
113596 |
113691 |
+ |
(TAT)n |
Simple_repeat |