genome | start | end | strand | repeat-name | repeat-class |
---|---|---|---|---|---|
scaffold7951 | 1 | 82 | + | RS980 | Unspecified |
scaffold7951 | 171 | 224 | + | A-rich | Low_complexity |
scaffold7951 | 1498 | 1543 | + | A-rich | Low_complexity |
scaffold7951 | 2581 | 2666 | - | MuDR-8_VV | DNA/MULE-MuDR |
scaffold7951 | 3466 | 3498 | + | A-rich | Low_complexity |
scaffold7951 | 4316 | 4346 | + | (T)n | Simple_repeat |
scaffold7951 | 4416 | 4451 | + | (AGAATG)n | Simple_repeat |
scaffold7951 | 7097 | 7534 | + | LINE | LINE(TransposonPSI) |
scaffold7951 | 7099 | 7341 | + | L1-11_Mad | LINE/L1 |
scaffold7951 | 8176 | 8234 | + | A-rich | Low_complexity |
scaffold7951 | 8994 | 9365 | + | LINE | LINE(TransposonPSI) |
scaffold7951 | 10366 | 10504 | - | RS6667 | Unspecified |
scaffold7951 | 10544 | 10581 | + | A-rich | Low_complexity |
scaffold7951 | 10660 | 10710 | + | A-rich | Low_complexity |
scaffold7951 | 10711 | 10734 | + | (A)n | Simple_repeat |
scaffold7951 | 10735 | 10764 | + | A-rich | Low_complexity |
scaffold7951 | 12088 | 14397 | + | Copia-66_GM-I | LTR/Copia |
scaffold7951 | 12111 | 13105 | - | RS2574 | Unspecified |
scaffold7951 | 14404 | 14760 | + | (ATT)n | Simple_repeat |
scaffold7951 | 14687 | 14760 | + | (ATT)n | Simple_repeat |
scaffold7951 | 15187 | 15210 | + | (CTC)n | Simple_repeat |
scaffold7951 | 15319 | 15353 | + | (GACGAG)n | Simple_repeat |
scaffold7951 | 20202 | 20226 | + | (A)n | Simple_repeat |
scaffold7951 | 22648 | 22699 | + | (GATAT)n | Simple_repeat |
scaffold7951 | 22742 | 22777 | + | (A)n | Simple_repeat |
scaffold7951 | 23341 | 23372 | + | (CGGGG)n | Simple_repeat |
scaffold7951 | 23750 | 23806 | + | (TATAA)n | Simple_repeat |
scaffold7951 | 24328 | 24738 | - | RS3487 | Unspecified |
scaffold7951 | 24538 | 24887 | - | RS5479 | Unspecified |
scaffold7951 | 24843 | 25150 | - | RS12133 | Unspecified |
scaffold7951 | 26433 | 26549 | + | (T)n | Simple_repeat |
scaffold7951 | 26529 | 26549 | + | (T)n | Simple_repeat |
scaffold7951 | 28050 | 28304 | + | RS4686 | Unspecified |
scaffold7951 | 28172 | 28583 | - | PL785 | Unspecified |
scaffold7951 | 28619 | 28814 | - | PL736 | Unspecified |
scaffold7951 | 28822 | 29364 | - | PL799 | Unspecified |
scaffold7951 | 29447 | 29505 | + | (TTC)n | Simple_repeat |
scaffold7951 | 29527 | 29623 | + | (CAA)n | Simple_repeat |
scaffold7951 | 29849 | 29891 | + | (CCTCT)n | Simple_repeat |
scaffold7951 | 29949 | 29992 | + | (CT)n | Simple_repeat |
scaffold7951 | 30131 | 31354 | - | PL787 | Unspecified |
scaffold7951 | 31869 | 33232 | + | Gypsy-5_Pru-I | LTR/Gypsy |
scaffold7951 | 33258 | 33428 | + | RS438 | Unspecified |
scaffold7951 | 33572 | 33610 | + | (CT)n | Simple_repeat |
scaffold7951 | 33789 | 33821 | + | PL571 | Unspecified |
scaffold7951 | 33998 | 34033 | + | (TAA)n | Simple_repeat |
scaffold7951 | 34245 | 34280 | + | (A)n | Simple_repeat |
scaffold7951 | 34354 | 34514 | + | RS12953 | Unspecified |
scaffold7951 | 35011 | 35074 | + | (AAT)n | Simple_repeat |
scaffold7951 | 36132 | 36171 | + | (TTTTAT)n | Simple_repeat |
scaffold7951 | 36309 | 36830 | + | RS314 | Unspecified |
scaffold7951 | 36719 | 36921 | + | RS13104 | Unspecified |
scaffold7951 | 36743 | 36921 | + | RS1094 | Unspecified |
scaffold7951 | 39282 | 39472 | + | RS58 | Unspecified |
scaffold7951 | 39473 | 39617 | + | RS438 | Unspecified |
scaffold7951 | 39597 | 39815 | - | RS535 | Unspecified |
scaffold7951 | 39814 | 39894 | + | RS48 | Unspecified |
scaffold7951 | 39894 | 40134 | - | RS58 | Unspecified |
scaffold7951 | 41684 | 41844 | - | RS5141 | Unspecified |
scaffold7951 | 42697 | 42829 | - | RS8151 | Unspecified |
scaffold7951 | 42831 | 42862 | + | (ATTT)n | Simple_repeat |
scaffold7951 | 42891 | 43593 | + | RS438 | Unspecified |
scaffold7951 | 43664 | 43739 | + | (TAT)n | Simple_repeat |
scaffold7951 | 43884 | 43920 | + | (TTATT)n | Simple_repeat |
scaffold7951 | 44286 | 44309 | + | (T)n | Simple_repeat |
scaffold7951 | 44525 | 44561 | + | (ATT)n | Simple_repeat |
scaffold7951 | 44857 | 45315 | + | gypsy | gypsy(TransposonPSI) |
scaffold7951 | 44861 | 45125 | + | Gypsy-38_Mad-I | LTR/Gypsy |
scaffold7951 | 45435 | 46010 | + | Gypsy-47_Mad-I | LTR/Gypsy |
scaffold7951 | 46559 | 46634 | + | Copia-90_Mad-I | LTR/Copia |
scaffold7951 | 47973 | 48038 | + | A-rich | Low_complexity |
scaffold7951 | 49149 | 50768 | + | RS254 | Unspecified |
scaffold7951 | 49881 | 51691 | + | RS51 | Unspecified |
scaffold7951 | 51452 | 51726 | + | PL383 | Unspecified |
scaffold7951 | 51779 | 52443 | - | RS10424 | Unspecified |
scaffold7951 | 52345 | 52790 | + | PL947 | Unspecified |
scaffold7951 | 53017 | 53122 | + | Ogre-VP1_I-int | LTR/Gypsy |
scaffold7951 | 54010 | 54033 | + | (AAAC)n | Simple_repeat |
scaffold7951 | 59684 | 60355 | - | PL182 | Unspecified |
scaffold7951 | 59901 | 60719 | + | PL921 | Unspecified |
scaffold7951 | 60129 | 61286 | + | RS3063 | Unspecified |
scaffold7951 | 61238 | 63092 | - | RS2918 | Unspecified |
scaffold7951 | 63376 | 63429 | + | (AC)n | Simple_repeat |
scaffold7951 | 65657 | 65757 | + | PL318 | Unspecified |
scaffold7951 | 66116 | 66611 | + | PL522 | Unspecified |
scaffold7951 | 68697 | 69106 | - | RS3487 | Unspecified |
scaffold7951 | 69809 | 69825 | + | A-rich | Low_complexity |
scaffold7951 | 69826 | 69847 | + | (ATT)n | Simple_repeat |
scaffold7951 | 69848 | 69890 | + | A-rich | Low_complexity |
scaffold7951 | 70054 | 70084 | + | (ATAT)n | Simple_repeat |
scaffold7951 | 70261 | 70291 | + | (CTCGA)n | Simple_repeat |
scaffold7951 | 70318 | 70347 | + | A-rich | Low_complexity |
scaffold7951 | 70640 | 70933 | + | PL511 | Unspecified |
scaffold7951 | 71420 | 71626 | - | cacta | cacta(TransposonPSI) |
scaffold7951 | 71458 | 71481 | + | (TC)n | Simple_repeat |
scaffold7951 | 71513 | 71616 | + | (CCTCCA)n | Simple_repeat |
scaffold7951 | 72215 | 72253 | + | (TGTTTAA)n | Simple_repeat |
scaffold7951 | 74090 | 74163 | + | A-rich | Low_complexity |
scaffold7951 | 76211 | 76249 | + | (T)n | Simple_repeat |
scaffold7951 | 78205 | 78233 | + | (TTC)n | Simple_repeat |
scaffold7951 | 78270 | 78303 | + | (TTAT)n | Simple_repeat |
scaffold7951 | 78724 | 78781 | + | (TTTAATG)n | Simple_repeat |
scaffold7951 | 82022 | 82051 | + | (AATA)n | Simple_repeat |
scaffold7951 | 82130 | 82179 | + | (T)n | Simple_repeat |
scaffold7951 | 82892 | 83246 | - | RS1813 | Unspecified |
scaffold7951 | 84122 | 84149 | + | (A)n | Simple_repeat |
scaffold7951 | 84526 | 84596 | + | (CCA)n | Simple_repeat |
scaffold7951 | 84614 | 84640 | + | (T)n | Simple_repeat |
scaffold7951 | 87668 | 87697 | + | (A)n | Simple_repeat |
scaffold7951 | 88759 | 88776 | + | (T)n | Simple_repeat |
scaffold7951 | 89310 | 89542 | - | RS15131 | Unspecified |
scaffold7951 | 89896 | 89926 | + | (T)n | Simple_repeat |
scaffold7951 | 89940 | 90164 | + | A-rich | Low_complexity |
scaffold7951 | 90875 | 90916 | + | (ATTTATG)n | Simple_repeat |
scaffold7951 | 90998 | 91355 | + | RS8 | Unspecified |
scaffold7951 | 91433 | 91449 | + | (AT)n | Simple_repeat |
scaffold7951 | 91548 | 91577 | + | (A)n | Simple_repeat |
scaffold7951 | 91679 | 91697 | + | (TTC)n | Simple_repeat |
scaffold7951 | 92153 | 92238 | + | Helitron-N1_SBi | RC/Helitron |
scaffold7951 | 92153 | 92510 | + | Helitron-N1_SBi | RC/Helitron |
scaffold7951 | 92210 | 92510 | - | RS3219 | Unspecified |
scaffold7951 | 92702 | 92781 | + | (GAATTTA)n | Simple_repeat |
scaffold7951 | 93215 | 93453 | - | RS4199 | Unspecified |
scaffold7951 | 93254 | 93610 | + | RS8518 | Unspecified |
scaffold7951 | 93757 | 94061 | - | RS899 | Unspecified |
scaffold7951 | 93922 | 94373 | + | A-rich | Low_complexity |
scaffold7951 | 94329 | 94373 | + | A-rich | Low_complexity |
scaffold7951 | 94430 | 94511 | - | RS1657 | Unspecified |
scaffold7951 | 95349 | 95425 | + | GA-rich | Low_complexity |
scaffold7951 | 95477 | 95529 | + | (AAGTGA)n | Simple_repeat |
scaffold7951 | 95579 | 95631 | + | (T)n | Simple_repeat |
scaffold7951 | 95736 | 95788 | + | (AT)n | Simple_repeat |
scaffold7951 | 96163 | 96223 | + | A-rich | Low_complexity |
scaffold7951 | 97597 | 97635 | + | ATLINEIII | LINE/L1 |
scaffold7951 | 98617 | 98688 | + | L1-10_GM | LINE/L1 |
scaffold7951 | 98766 | 99071 | + | helitronORF | helitronORF(TransposonPSI) |
scaffold7951 | 98778 | 99038 | + | HELITRON7_OS | RC/Helitron |
scaffold7951 | 99296 | 99522 | + | Helitron-1_EPa | RC/Helitron |
scaffold7951 | 99635 | 100379 | + | PL746 | Unspecified |
scaffold7951 | 103210 | 103353 | - | RS6881 | Unspecified |
scaffold7951 | 103626 | 103665 | + | A-rich | Low_complexity |
scaffold7951 | 103734 | 103777 | + | A-rich | Low_complexity |
scaffold7951 | 104447 | 105080 | + | A-rich | Low_complexity |
scaffold7951 | 104447 | 104491 | + | A-rich | Low_complexity |
scaffold7951 | 104478 | 105080 | + | RS2618 | Unspecified |
scaffold7951 | 105073 | 105428 | - | RS986 | Unspecified |
scaffold7951 | 105235 | 105826 | - | RS1358 | Unspecified |
scaffold7951 | 105828 | 106172 | - | RS976 | Unspecified |
scaffold7951 | 105837 | 106117 | - | RS1878 | Unspecified |
scaffold7951 | 106251 | 106298 | + | A-rich | Low_complexity |
scaffold7951 | 106957 | 107809 | - | PL532 | Unspecified |
scaffold7951 | 107782 | 108959 | + | HELMET3 | RC/Helitron |
scaffold7951 | 109337 | 109919 | + | HELMET3 | RC/Helitron |
scaffold7951 | 110003 | 110145 | + | Helitron3 | RC/Helitron |
scaffold7951 | 110222 | 110437 | - | PL544 | Unspecified |
scaffold7951 | 112603 | 112647 | + | A-rich | Low_complexity |
scaffold7951 | 112839 | 112867 | + | (TA)n | Simple_repeat |
scaffold7951 | 113843 | 113877 | + | (ATTTTA)n | Simple_repeat |
scaffold7951 | 114202 | 114211 | + | (ATATTT)n | Simple_repeat |
scaffold7951 | 114212 | 114237 | + | (TA)n | Simple_repeat |
scaffold7951 | 114238 | 114249 | + | (ATATTT)n | Simple_repeat |
scaffold7951 | 114767 | 114817 | + | (TATT)n | Simple_repeat |
scaffold7951 | 115144 | 115304 | + | (GTTCA)n | Simple_repeat |
scaffold7951 | 115620 | 116199 | + | HELMET3 | RC/Helitron |
scaffold7951 | 116281 | 116423 | + | Helitron3 | RC/Helitron |
scaffold7951 | 116401 | 117188 | + | Helitron-5_SBi | RC/Helitron |
scaffold7951 | 119039 | 119323 | + | RS9793 | Unspecified |
scaffold7951 | 121177 | 121225 | + | (TTTGATT)n | Simple_repeat |
scaffold7951 | 122271 | 122351 | + | (TAATTT)n | Simple_repeat |
scaffold7951 | 122632 | 122702 | + | RETROSAT5_I-int | LTR/Gypsy |
scaffold7951 | 122734 | 123287 | - | PL807 | Unspecified |
scaffold7951 | 123327 | 123977 | + | Helitron-N4_SBi | RC/Helitron |
scaffold7951 | 124684 | 124707 | + | (CCG)n | Simple_repeat |
scaffold7951 | 124831 | 124867 | + | (AATAAT)n | Simple_repeat |
scaffold7951 | 124879 | 124970 | + | ATHAT1 | DNA/hAT-Ac |
scaffold7951 | 125193 | 125238 | + | (T)n | Simple_repeat |
scaffold7951 | 127378 | 127404 | + | (ATTG)n | Simple_repeat |
scaffold7951 | 127624 | 127774 | + | (TCGGG)n | Simple_repeat |
scaffold7951 | 127994 | 128047 | + | G-rich | Low_complexity |
scaffold7951 | 131959 | 131975 | + | (T)n | Simple_repeat |
scaffold7951 | 132004 | 132204 | + | (CCCGA)n | Simple_repeat |
scaffold7951 | 132885 | 132948 | + | Gypsy-10_Pru-LTR | LTR/Gypsy |
scaffold7951 | 132960 | 133168 | - | PL656 | Unspecified |
scaffold7951 | 133166 | 133589 | - | PL888 | Unspecified |
scaffold7951 | 135437 | 135475 | + | (TCAGC)n | Simple_repeat |
scaffold7951 | 135490 | 138866 | + | RS254 | Unspecified |
scaffold7951 | 138941 | 139046 | - | Atlantys1_I-int | LTR/Gypsy |
scaffold7951 | 139260 | 139302 | + | A-rich | Low_complexity |
scaffold7951 | 139360 | 139496 | + | LTR-1_SBi-LTR | LTR |
scaffold7951 | 139742 | 139896 | + | (TGCTTTT)n | Simple_repeat |
scaffold7951 | 139948 | 139953 | + | (ATTT)n | Simple_repeat |
scaffold7951 | 139954 | 140045 | + | (T)n | Simple_repeat |
scaffold7951 | 140086 | 140120 | + | (AGCTTG)n | Simple_repeat |
scaffold7951 | 140266 | 140522 | + | PL920 | Unspecified |
scaffold7951 | 147831 | 147893 | - | RS30 | Unspecified |
scaffold7951 | 149322 | 149976 | + | RS984 | Unspecified |
scaffold7951 | 150146 | 150350 | - | LTR-1_SBi-LTR | LTR |
scaffold7951 | 150180 | 150371 | + | ATCOPIN_LTR | LTR |
scaffold7951 | 151003 | 152612 | + | RS265 | Unspecified |
scaffold7951 | 152632 | 152691 | - | PL240 | Unspecified |
scaffold7951 | 152704 | 152831 | - | L1-15_GM | LINE/L1 |
scaffold7951 | 154096 | 154116 | + | (A)n | Simple_repeat |
scaffold7951 | 154328 | 154357 | + | GA-rich | Low_complexity |
scaffold7951 | 154496 | 155084 | + | RS1980 | Unspecified |
scaffold7951 | 154968 | 155212 | + | RS2486 | Unspecified |
scaffold7951 | 155299 | 155348 | + | (TTATT)n | Simple_repeat |
scaffold7951 | 155904 | 155967 | + | (CCACCT)n | Simple_repeat |
scaffold7951 | 155942 | 155977 | + | (CCACCG)n | Simple_repeat |
scaffold7951 | 156102 | 156138 | + | (AAT)n | Simple_repeat |
scaffold7951 | 156159 | 156222 | + | MuDR1_ZM | DNA/MULE-MuDR |
scaffold7951 | 158509 | 158525 | + | (A)n | Simple_repeat |
scaffold7951 | 158763 | 158798 | + | (TTATTG)n | Simple_repeat |
scaffold7951 | 162161 | 162424 | - | RS356 | Unspecified |
scaffold7951 | 162546 | 162583 | + | A-rich | Low_complexity |
scaffold7951 | 163111 | 163131 | + | (A)n | Simple_repeat |
scaffold7951 | 165722 | 165811 | + | ATRAN | DNA? |
scaffold7951 | 166372 | 166425 | + | A-rich | Low_complexity |
scaffold7951 | 166934 | 166971 | + | (TATATT)n | Simple_repeat |
scaffold7951 | 167122 | 167549 | - | PL774 | Unspecified |
scaffold7951 | 167626 | 167657 | + | (A)n | Simple_repeat |
scaffold7951 | 168275 | 168559 | + | helitronORF | helitronORF(TransposonPSI) |
scaffold7951 | 168911 | 168973 | + | (ATTAGTG)n | Simple_repeat |
scaffold7951 | 169036 | 169084 | + | (TTTATAA)n | Simple_repeat |
scaffold7951 | 170176 | 170281 | + | HELITRON5_OS | RC/Helitron |
scaffold7951 | 170611 | 170686 | + | Helitron3_OS | RC/Helitron |