scaffold7972 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold7972 |
1 |
298 |
+ |
RS412 |
Unspecified |
| scaffold7972 |
1480 |
1539 |
- |
EnSpm-11_STu |
DNA/CMC-EnSpm |
| scaffold7972 |
1501 |
1615 |
+ |
LINE1I_MT |
LINE/L1 |
| scaffold7972 |
1779 |
1854 |
+ |
SZ-27LIKE |
LTR/Copia |
| scaffold7972 |
1789 |
1914 |
- |
Copia-62_GM-LTR |
LTR/Copia |
| scaffold7972 |
1951 |
2009 |
+ |
(AGTGTTT)n |
Simple_repeat |
| scaffold7972 |
3612 |
3644 |
+ |
(TGA)n |
Simple_repeat |
| scaffold7972 |
3667 |
3732 |
+ |
(GAGGAT)n |
Simple_repeat |
| scaffold7972 |
5178 |
5221 |
+ |
(TTATG)n |
Simple_repeat |
| scaffold7972 |
5665 |
6690 |
- |
Gypsy3-VV_I-int |
LTR/Gypsy |
| scaffold7972 |
6925 |
7254 |
- |
Gypsy3-VV_I-int |
LTR/Gypsy |
| scaffold7972 |
7325 |
8666 |
- |
Gypsy-38_Mad-I |
LTR/Gypsy |
| scaffold7972 |
8895 |
8991 |
- |
Gypsy-38_Mad-I |
LTR/Gypsy |
| scaffold7972 |
11069 |
11152 |
+ |
SZ-27LIKE |
LTR/Copia |
| scaffold7972 |
11079 |
11204 |
- |
Copia-62_GM-LTR |
LTR/Copia |
| scaffold7972 |
11241 |
11299 |
+ |
(AGTGTTT)n |
Simple_repeat |
| scaffold7972 |
12722 |
13586 |
+ |
L1-1_GM |
LINE/L1 |
| scaffold7972 |
12814 |
12888 |
+ |
A-rich |
Low_complexity |
| scaffold7972 |
13786 |
13917 |
+ |
LINE1-38_SBi |
LINE/L1 |
| scaffold7972 |
13885 |
14015 |
+ |
L1-2_GM |
LINE/L1 |
| scaffold7972 |
14835 |
16592 |
+ |
RS412 |
Unspecified |
| scaffold7972 |
15388 |
16921 |
- |
RS832 |
Unspecified |
| scaffold7972 |
16933 |
17772 |
- |
RS44 |
Unspecified |
| scaffold7972 |
17591 |
17923 |
- |
RS1344 |
Unspecified |
| scaffold7972 |
18567 |
18632 |
- |
Gypsy-10_Pru-LTR |
LTR/Gypsy |
| scaffold7972 |
19335 |
19419 |
- |
Atlantys1_I-int |
LTR/Gypsy |
| scaffold7972 |
21591 |
21667 |
- |
ATCOPI1_LTR |
LTR/Copia |
| scaffold7972 |
21683 |
22597 |
- |
RS105 |
Unspecified |
| scaffold7972 |
22309 |
22910 |
- |
PL383 |
Unspecified |
| scaffold7972 |
22421 |
23233 |
+ |
RS2700 |
Unspecified |
| scaffold7972 |
25182 |
25352 |
- |
RS51 |
Unspecified |
| scaffold7972 |
25366 |
25419 |
+ |
Gypsy-21_ST-I |
LTR/Gypsy |
| scaffold7972 |
25484 |
25865 |
+ |
Gypsy-38_Mad-I |
LTR/Gypsy |
| scaffold7972 |
26076 |
26173 |
+ |
Gypsy-38_Mad-I |
LTR/Gypsy |
| scaffold7972 |
28151 |
28385 |
+ |
RS3999 |
Unspecified |
| scaffold7972 |
28385 |
28934 |
- |
RS57 |
Unspecified |
| scaffold7972 |
29054 |
29259 |
- |
RS6298 |
Unspecified |
| scaffold7972 |
29124 |
29396 |
- |
RS6507 |
Unspecified |
| scaffold7972 |
29214 |
29429 |
- |
RS8295 |
Unspecified |
| scaffold7972 |
29637 |
29847 |
- |
RS2349 |
Unspecified |
| scaffold7972 |
29728 |
29872 |
- |
RS10993 |
Unspecified |
| scaffold7972 |
29983 |
30033 |
+ |
A-rich |
Low_complexity |
| scaffold7972 |
30536 |
30973 |
- |
PL2 |
Unspecified |
| scaffold7972 |
31743 |
31768 |
+ |
(A)n |
Simple_repeat |
| scaffold7972 |
31893 |
31959 |
+ |
(ATATT)n |
Simple_repeat |