scaffold8160 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold8160 |
4 |
177 |
+ |
PL799 |
Unspecified |
| scaffold8160 |
178 |
323 |
+ |
RS3896 |
Unspecified |
| scaffold8160 |
323 |
438 |
+ |
RS439 |
Unspecified |
| scaffold8160 |
529 |
761 |
- |
RS546 |
Unspecified |
| scaffold8160 |
864 |
1120 |
- |
RS5208 |
Unspecified |
| scaffold8160 |
1429 |
1739 |
- |
RS4355 |
Unspecified |
| scaffold8160 |
2093 |
2125 |
+ |
(T)n |
Simple_repeat |
| scaffold8160 |
2188 |
2341 |
- |
RS1587 |
Unspecified |
| scaffold8160 |
2745 |
2753 |
+ |
(TAATT)n |
Simple_repeat |
| scaffold8160 |
2754 |
2790 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold8160 |
3209 |
3266 |
+ |
(TAATTT)n |
Simple_repeat |
| scaffold8160 |
3360 |
3416 |
+ |
(TAATTG)n |
Simple_repeat |
| scaffold8160 |
3649 |
3672 |
+ |
(TAT)n |
Simple_repeat |
| scaffold8160 |
3839 |
3895 |
+ |
(AC)n |
Simple_repeat |
| scaffold8160 |
3909 |
4241 |
- |
RS1065 |
Unspecified |
| scaffold8160 |
6620 |
10201 |
- |
RS254 |
Unspecified |
| scaffold8160 |
10253 |
10280 |
+ |
GA-rich |
Low_complexity |
| scaffold8160 |
11118 |
11188 |
+ |
(TTGTTT)n |
Simple_repeat |
| scaffold8160 |
11952 |
12040 |
+ |
(ATGTGT)n |
Simple_repeat |
| scaffold8160 |
14166 |
14782 |
- |
PL495 |
Unspecified |
| scaffold8160 |
15301 |
15322 |
+ |
(T)n |
Simple_repeat |
| scaffold8160 |
15332 |
16770 |
- |
PL554 |
Unspecified |
| scaffold8160 |
17202 |
17256 |
- |
Gypsy-LTR_MT |
LTR/Gypsy |
| scaffold8160 |
17386 |
18422 |
- |
GYPSY3-I_MT |
LTR/Gypsy |
| scaffold8160 |
18780 |
20564 |
- |
gypsy |
gypsy(TransposonPSI) |
| scaffold8160 |
18973 |
19118 |
- |
Atlantys1_I-int |
LTR/Gypsy |
| scaffold8160 |
19093 |
20549 |
- |
Gypsy-I_MT |
LTR/Gypsy |
| scaffold8160 |
20738 |
20807 |
+ |
(TGTTTTT)n |
Simple_repeat |
| scaffold8160 |
20989 |
21012 |
+ |
(TCT)n |
Simple_repeat |
| scaffold8160 |
21015 |
21122 |
- |
RS3670 |
Unspecified |
| scaffold8160 |
21816 |
21907 |
- |
Gypsy-I_MT |
LTR/Gypsy |
| scaffold8160 |
22132 |
22342 |
- |
PL947 |
Unspecified |
| scaffold8160 |
22335 |
22739 |
- |
PL947 |
Unspecified |
| scaffold8160 |
23441 |
23464 |
+ |
(TCT)n |
Simple_repeat |
| scaffold8160 |
23478 |
23533 |
+ |
(TGCTTGAGT)n |
Simple_repeat |
| scaffold8160 |
23596 |
23679 |
- |
Gypsy-29_VV-I |
LTR/Gypsy |
| scaffold8160 |
25518 |
26709 |
+ |
PL956 |
Unspecified |
| scaffold8160 |
27359 |
27375 |
+ |
(G)n |
Simple_repeat |
| scaffold8160 |
28579 |
28703 |
+ |
RS641 |
Unspecified |
| scaffold8160 |
29537 |
29743 |
+ |
(TCGGG)n |
Simple_repeat |
| scaffold8160 |
29761 |
29787 |
+ |
(TA)n |
Simple_repeat |
| scaffold8160 |
30194 |
30251 |
+ |
(TTA)n |
Simple_repeat |
| scaffold8160 |
30303 |
30452 |
- |
RS15279 |
Unspecified |
| scaffold8160 |
32221 |
32415 |
+ |
RS14631 |
Unspecified |
| scaffold8160 |
32595 |
34249 |
+ |
RS200 |
Unspecified |
| scaffold8160 |
32776 |
34164 |
- |
LINE1-60_SBi |
LINE/L1 |
| scaffold8160 |
35259 |
35440 |
- |
LINE1-60_SBi |
LINE/L1 |
| scaffold8160 |
36981 |
37091 |
- |
Copia-3_PTri-I |
LTR/Copia |
| scaffold8160 |
38033 |
38266 |
- |
Copia-3_PTri-I |
LTR/Copia |
| scaffold8160 |
38426 |
38454 |
+ |
(T)n |
Simple_repeat |
| scaffold8160 |
38728 |
38734 |
+ |
(AATA)n |
Simple_repeat |
| scaffold8160 |
38735 |
38757 |
+ |
(A)n |
Simple_repeat |
| scaffold8160 |
38758 |
38776 |
+ |
(AATA)n |
Simple_repeat |
| scaffold8160 |
39046 |
39076 |
+ |
(AAAAT)n |
Simple_repeat |
| scaffold8160 |
39620 |
39825 |
+ |
RS3094 |
Unspecified |
| scaffold8160 |
39991 |
40016 |
+ |
(TATT)n |
Simple_repeat |
| scaffold8160 |
40994 |
41191 |
+ |
(A)n |
Simple_repeat |
| scaffold8160 |
40994 |
41011 |
+ |
(A)n |
Simple_repeat |
| scaffold8160 |
41009 |
41191 |
+ |
RS3094 |
Unspecified |
| scaffold8160 |
41188 |
41418 |
- |
RS13348 |
Unspecified |
| scaffold8160 |
41253 |
41450 |
+ |
RS757 |
Unspecified |
| scaffold8160 |
41452 |
41656 |
+ |
RS5718 |
Unspecified |
| scaffold8160 |
41653 |
41695 |
+ |
(AATATT)n |
Simple_repeat |
| scaffold8160 |
41972 |
42148 |
+ |
RS1115 |
Unspecified |
| scaffold8160 |
42153 |
42270 |
+ |
PL620 |
Unspecified |
| scaffold8160 |
43579 |
44651 |
+ |
RS51 |
Unspecified |
| scaffold8160 |
44415 |
44685 |
+ |
PL383 |
Unspecified |
| scaffold8160 |
45328 |
45562 |
- |
RS9908 |
Unspecified |
| scaffold8160 |
45563 |
45882 |
- |
RS210 |
Unspecified |
| scaffold8160 |
46389 |
46494 |
+ |
Gypsy-133_GM-I |
LTR/Gypsy |
| scaffold8160 |
47138 |
47177 |
+ |
(AAGCAACCC)n |
Simple_repeat |
| scaffold8160 |
47208 |
47234 |
+ |
GA-rich |
Low_complexity |
| scaffold8160 |
47417 |
47460 |
+ |
(AAC)n |
Simple_repeat |
| scaffold8160 |
47640 |
47990 |
+ |
gypsy |
gypsy(TransposonPSI) |