scaffold8324 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold8324 |
20 |
75 |
+ |
(TTGATT)n |
Simple_repeat |
| scaffold8324 |
794 |
883 |
- |
RS649 |
Unspecified |
| scaffold8324 |
880 |
1122 |
+ |
RS217 |
Unspecified |
| scaffold8324 |
1192 |
1357 |
- |
PL160 |
Unspecified |
| scaffold8324 |
1405 |
1595 |
+ |
RS217 |
Unspecified |
| scaffold8324 |
2077 |
2124 |
+ |
(AATT)n |
Simple_repeat |
| scaffold8324 |
2520 |
2549 |
+ |
(AATTAT)n |
Simple_repeat |
| scaffold8324 |
2841 |
3266 |
+ |
PL580 |
Unspecified |
| scaffold8324 |
3266 |
3307 |
+ |
(T)n |
Simple_repeat |
| scaffold8324 |
3430 |
3496 |
+ |
(AT)n |
Simple_repeat |
| scaffold8324 |
3531 |
3571 |
+ |
(AATAA)n |
Simple_repeat |
| scaffold8324 |
3891 |
4657 |
- |
RS575 |
Unspecified |
| scaffold8324 |
4655 |
4816 |
- |
RS2719 |
Unspecified |
| scaffold8324 |
4662 |
4835 |
+ |
RS233 |
Unspecified |
| scaffold8324 |
4832 |
5903 |
- |
RS575 |
Unspecified |
| scaffold8324 |
5906 |
6029 |
+ |
RS43 |
Unspecified |
| scaffold8324 |
6024 |
6634 |
- |
RS1198 |
Unspecified |
| scaffold8324 |
6832 |
6870 |
+ |
(TTTATTT)n |
Simple_repeat |
| scaffold8324 |
7824 |
7837 |
+ |
(TAT)n |
Simple_repeat |
| scaffold8324 |
7838 |
7867 |
+ |
(T)n |
Simple_repeat |
| scaffold8324 |
8671 |
8689 |
+ |
(A)n |
Simple_repeat |
| scaffold8324 |
9526 |
9789 |
- |
RS356 |
Unspecified |
| scaffold8324 |
10140 |
10161 |
+ |
(A)n |
Simple_repeat |
| scaffold8324 |
10240 |
10814 |
- |
RS132 |
Unspecified |
| scaffold8324 |
10954 |
11003 |
+ |
(ATAATTT)n |
Simple_repeat |
| scaffold8324 |
10986 |
11084 |
+ |
(TAATTA)n |
Simple_repeat |
| scaffold8324 |
11358 |
11420 |
+ |
(ATTAA)n |
Simple_repeat |
| scaffold8324 |
12009 |
12074 |
+ |
A-rich |
Low_complexity |
| scaffold8324 |
12056 |
12107 |
+ |
(CTTT)n |
Simple_repeat |
| scaffold8324 |
12300 |
12325 |
+ |
(T)n |
Simple_repeat |
| scaffold8324 |
13136 |
13300 |
+ |
RS18111 |
Unspecified |
| scaffold8324 |
16424 |
16504 |
+ |
(TAT)n |
Simple_repeat |
| scaffold8324 |
16513 |
16570 |
+ |
(TTATT)n |
Simple_repeat |
| scaffold8324 |
17373 |
18912 |
- |
Copia-5_ST-I |
LTR/Copia |
| scaffold8324 |
18934 |
19484 |
+ |
Copia-18_ST-I |
LTR/Copia |
| scaffold8324 |
19673 |
21459 |
- |
Copia-5_ST-I |
LTR/Copia |
| scaffold8324 |
22196 |
22215 |
+ |
(TTTG)n |
Simple_repeat |
| scaffold8324 |
22258 |
22713 |
+ |
PL352 |
Unspecified |
| scaffold8324 |
23090 |
23146 |
+ |
(TTATT)n |
Simple_repeat |
| scaffold8324 |
23378 |
23433 |
+ |
A-rich |
Low_complexity |
| scaffold8324 |
24226 |
24295 |
- |
RS6798 |
Unspecified |
| scaffold8324 |
24293 |
24925 |
- |
RS2174 |
Unspecified |
| scaffold8324 |
24885 |
25762 |
+ |
RS1367 |
Unspecified |
| scaffold8324 |
26229 |
26316 |
+ |
(CAACAAT)n |
Simple_repeat |
| scaffold8324 |
26980 |
27017 |
+ |
(ACA)n |
Simple_repeat |
| scaffold8324 |
27293 |
27429 |
- |
RS11083 |
Unspecified |
| scaffold8324 |
28157 |
28190 |
+ |
(TCTTGAT)n |
Simple_repeat |
| scaffold8324 |
28597 |
28650 |
+ |
(TGTGTG)n |
Simple_repeat |
| scaffold8324 |
28776 |
28858 |
- |
RS5864 |
Unspecified |
| scaffold8324 |
28878 |
28943 |
+ |
(AACAATA)n |
Simple_repeat |
| scaffold8324 |
29198 |
29324 |
- |
RS1594 |
Unspecified |
| scaffold8324 |
29326 |
29473 |
- |
Copia-4_GM-I |
LTR/Copia |
| scaffold8324 |
29477 |
30196 |
- |
Copia-4_GM-I |
LTR/Copia |
| scaffold8324 |
30797 |
31158 |
- |
Copia-4_GM-I |
LTR/Copia |
| scaffold8324 |
31290 |
31545 |
+ |
RS1594 |
Unspecified |
| scaffold8324 |
31547 |
31586 |
- |
RS1960 |
Unspecified |
| scaffold8324 |
31636 |
32284 |
+ |
Copia-4_GM-I |
LTR/Copia |
| scaffold8324 |
32502 |
35305 |
+ |
Copia-4_GM-I |
LTR/Copia |
| scaffold8324 |
35882 |
36724 |
+ |
Copia-4_GM-I |
LTR/Copia |
| scaffold8324 |
36727 |
37055 |
+ |
RS1594 |
Unspecified |
| scaffold8324 |
37030 |
37265 |
- |
RS1594 |
Unspecified |
| scaffold8324 |
37297 |
37442 |
+ |
RS713 |
Unspecified |
| scaffold8324 |
38274 |
38341 |
+ |
(CTTTTTT)n |
Simple_repeat |
| scaffold8324 |
38506 |
38542 |
+ |
(TTATTTA)n |
Simple_repeat |
| scaffold8324 |
38547 |
38574 |
+ |
(GAATT)n |
Simple_repeat |
| scaffold8324 |
38668 |
38707 |
+ |
A-rich |
Low_complexity |
| scaffold8324 |
38972 |
39061 |
- |
RS679 |
Unspecified |
| scaffold8324 |
39076 |
39116 |
+ |
(T)n |
Simple_repeat |
| scaffold8324 |
39503 |
39584 |
- |
RS679 |
Unspecified |
| scaffold8324 |
40143 |
40179 |
+ |
(TCTAAT)n |
Simple_repeat |
| scaffold8324 |
41021 |
41070 |
+ |
(A)n |
Simple_repeat |
| scaffold8324 |
41191 |
41268 |
+ |
(TTC)n |
Simple_repeat |
| scaffold8324 |
41191 |
41382 |
+ |
(TTC)n |
Simple_repeat |
| scaffold8324 |
41252 |
41382 |
+ |
RS3272 |
Unspecified |
| scaffold8324 |
41559 |
41601 |
+ |
(TT)n |
Simple_repeat |
| scaffold8324 |
41669 |
41993 |
+ |
RS10869 |
Unspecified |
| scaffold8324 |
42045 |
42692 |
+ |
RS7968 |
Unspecified |
| scaffold8324 |
42479 |
42762 |
+ |
RS4572 |
Unspecified |
| scaffold8324 |
43384 |
43417 |
+ |
(T)n |
Simple_repeat |
| scaffold8324 |
44854 |
44877 |
+ |
(T)n |
Simple_repeat |
| scaffold8324 |
45260 |
45287 |
+ |
(TAACAA)n |
Simple_repeat |
| scaffold8324 |
45406 |
45493 |
+ |
(AATAAT)n |
Simple_repeat |
| scaffold8324 |
45558 |
45594 |
+ |
(TCTTT)n |
Simple_repeat |
| scaffold8324 |
45988 |
49441 |
- |
Copia-67_GM-I |
LTR/Copia |
| scaffold8324 |
49624 |
50833 |
- |
Copia-86_ST-I |
LTR/Copia |
| scaffold8324 |
49624 |
50001 |
- |
Copia-86_ST-I |
LTR/Copia |
| scaffold8324 |
49962 |
50833 |
- |
RS351 |
Unspecified |
| scaffold8324 |
51392 |
51716 |
+ |
PL600 |
Unspecified |
| scaffold8324 |
53184 |
53900 |
- |
Copia-86_ST-I |
LTR/Copia |
| scaffold8324 |
53899 |
54144 |
+ |
RS8 |
Unspecified |
| scaffold8324 |
54215 |
54255 |
+ |
(A)n |
Simple_repeat |
| scaffold8324 |
54327 |
54885 |
- |
RS72 |
Unspecified |
| scaffold8324 |
55007 |
55033 |
+ |
(T)n |
Simple_repeat |
| scaffold8324 |
55410 |
55426 |
+ |
(T)n |
Simple_repeat |
| scaffold8324 |
55468 |
55547 |
- |
RS6506 |
Unspecified |
| scaffold8324 |
56923 |
56949 |
+ |
(TGA)n |
Simple_repeat |
| scaffold8324 |
60914 |
60954 |
+ |
GA-rich |
Low_complexity |
| scaffold8324 |
61131 |
61171 |
+ |
(TATCATA)n |
Simple_repeat |
| scaffold8324 |
61171 |
61261 |
+ |
RS356 |
Unspecified |
| scaffold8324 |
61260 |
61526 |
+ |
RS356 |
Unspecified |
| scaffold8324 |
61713 |
61817 |
+ |
RS4475 |
Unspecified |
| scaffold8324 |
61713 |
61805 |
- |
RS16382 |
Unspecified |
| scaffold8324 |
62188 |
62217 |
+ |
(A)n |
Simple_repeat |
| scaffold8324 |
62402 |
62449 |
+ |
A-rich |
Low_complexity |
| scaffold8324 |
62646 |
62794 |
+ |
RS2902 |
Unspecified |
| scaffold8324 |
63390 |
63455 |
+ |
(ATT)n |
Simple_repeat |
| scaffold8324 |
64571 |
65878 |
- |
LINE |
LINE(TransposonPSI) |
| scaffold8324 |
64728 |
65498 |
- |
L1-1_GM |
LINE/L1 |
| scaffold8324 |
67740 |
67787 |
+ |
(T)n |
Simple_repeat |
| scaffold8324 |
69447 |
69545 |
+ |
RS1 |
Unspecified |
| scaffold8324 |
69734 |
69898 |
- |
Copia-96_ST-I |
LTR/Copia |