scaffold8397 Repeat List
genome |
start |
end |
strand |
repeat-name |
repeat-class |
scaffold8397 |
1 |
184 |
+ |
PL475 |
Unspecified |
scaffold8397 |
2 |
337 |
- |
RS3292 |
Unspecified |
scaffold8397 |
328 |
1100 |
+ |
PL475 |
Unspecified |
scaffold8397 |
1889 |
2139 |
- |
RS425 |
Unspecified |
scaffold8397 |
2533 |
2606 |
+ |
RS381 |
Unspecified |
scaffold8397 |
2917 |
2959 |
+ |
RS933 |
Unspecified |
scaffold8397 |
2971 |
3492 |
+ |
RS933 |
Unspecified |
scaffold8397 |
4203 |
4249 |
+ |
Gypsy-193_ZM-I |
LTR/Gypsy |
scaffold8397 |
4281 |
4319 |
+ |
(TATAT)n |
Simple_repeat |
scaffold8397 |
5124 |
5294 |
+ |
RS754 |
Unspecified |
scaffold8397 |
5292 |
5812 |
+ |
RS12200 |
Unspecified |
scaffold8397 |
7320 |
7605 |
- |
RS94 |
Unspecified |
scaffold8397 |
7374 |
7605 |
+ |
PL702 |
Unspecified |
scaffold8397 |
11097 |
11358 |
+ |
RS8941 |
Unspecified |
scaffold8397 |
11193 |
11569 |
- |
PL169 |
Unspecified |
scaffold8397 |
11569 |
11759 |
+ |
RS5338 |
Unspecified |
scaffold8397 |
11947 |
12048 |
+ |
RS1100 |
Unspecified |
scaffold8397 |
12488 |
12559 |
+ |
RS1258 |
Unspecified |
scaffold8397 |
12558 |
12611 |
- |
RS1258 |
Unspecified |
scaffold8397 |
12793 |
12839 |
+ |
A-rich |
Low_complexity |
scaffold8397 |
13038 |
13095 |
+ |
RS18111 |
Unspecified |
scaffold8397 |
13045 |
13150 |
- |
RS12449 |
Unspecified |
scaffold8397 |
13056 |
13149 |
- |
RS16382 |
Unspecified |
scaffold8397 |
13307 |
13457 |
- |
RS9096 |
Unspecified |
scaffold8397 |
13505 |
13561 |
+ |
(AACTG)n |
Simple_repeat |
scaffold8397 |
13562 |
13573 |
+ |
(AATTG)n |
Simple_repeat |
scaffold8397 |
13586 |
13677 |
+ |
(CTGAA)n |
Simple_repeat |
scaffold8397 |
14029 |
14059 |
+ |
(ATTT)n |
Simple_repeat |
scaffold8397 |
14269 |
14371 |
+ |
(TAA)n |
Simple_repeat |
scaffold8397 |
14299 |
14371 |
+ |
(TAA)n |
Simple_repeat |
scaffold8397 |
15389 |
15529 |
+ |
RS13918 |
Unspecified |
scaffold8397 |
16163 |
16193 |
+ |
(T)n |
Simple_repeat |
scaffold8397 |
16566 |
16808 |
+ |
RS4 |
Unspecified |
scaffold8397 |
16980 |
17116 |
+ |
RS4300 |
Unspecified |
scaffold8397 |
19088 |
19205 |
- |
RS17699 |
Unspecified |
scaffold8397 |
19116 |
19375 |
+ |
RS1 |
Unspecified |
scaffold8397 |
19431 |
19547 |
- |
RS1095 |
Unspecified |
scaffold8397 |
19887 |
20150 |
+ |
RS9016 |
Unspecified |
scaffold8397 |
20332 |
20851 |
+ |
PL209 |
Unspecified |
scaffold8397 |
20886 |
21140 |
+ |
RS726 |
Unspecified |
scaffold8397 |
23273 |
23389 |
- |
RS5 |
Unspecified |
scaffold8397 |
23479 |
23841 |
- |
RS8 |
Unspecified |
scaffold8397 |
24007 |
24042 |
+ |
(AATTTC)n |
Simple_repeat |
scaffold8397 |
24133 |
24164 |
+ |
(TTCTAA)n |
Simple_repeat |
scaffold8397 |
24509 |
24559 |
+ |
A-rich |
Low_complexity |
scaffold8397 |
24576 |
24617 |
+ |
(TT)n |
Simple_repeat |
scaffold8397 |
24662 |
24689 |
+ |
(ATTA)n |
Simple_repeat |
scaffold8397 |
27240 |
27281 |
+ |
(A)n |
Simple_repeat |
scaffold8397 |
27322 |
27492 |
+ |
RS16831 |
Unspecified |
scaffold8397 |
27340 |
27602 |
- |
RS47 |
Unspecified |
scaffold8397 |
27614 |
27639 |
+ |
(A)n |
Simple_repeat |
scaffold8397 |
27674 |
27860 |
- |
RS38 |
Unspecified |
scaffold8397 |
29067 |
30147 |
- |
LINE1I_MT |
LINE/L1 |
scaffold8397 |
30603 |
30645 |
+ |
A-rich |
Low_complexity |
scaffold8397 |
31127 |
31161 |
+ |
(T)n |
Simple_repeat |
scaffold8397 |
32011 |
32068 |
+ |
Gypsy-35_Mad-I |
LTR/Gypsy |
scaffold8397 |
32922 |
32959 |
+ |
(TATAT)n |
Simple_repeat |
scaffold8397 |
32984 |
33137 |
+ |
STOWAWAY14_SB |
DNA/TcMar-Stowaway |
scaffold8397 |
33573 |
33636 |
+ |
(TAT)n |
Simple_repeat |
scaffold8397 |
33745 |
33885 |
- |
PL683 |
Unspecified |
scaffold8397 |
33746 |
33935 |
- |
PL47 |
Unspecified |
scaffold8397 |
33778 |
33935 |
- |
PL358 |
Unspecified |
scaffold8397 |
34114 |
34227 |
+ |
RS9456 |
Unspecified |
scaffold8397 |
34347 |
34393 |
+ |
(AATATAT)n |
Simple_repeat |
scaffold8397 |
34427 |
34637 |
+ |
RS16683 |
Unspecified |
scaffold8397 |
34839 |
35097 |
- |
RS1 |
Unspecified |
scaffold8397 |
35100 |
35362 |
+ |
RS1 |
Unspecified |
scaffold8397 |
35627 |
36010 |
+ |
RS8 |
Unspecified |
scaffold8397 |
37031 |
37124 |
- |
RS16382 |
Unspecified |
scaffold8397 |
37248 |
37518 |
+ |
RS1 |
Unspecified |
scaffold8397 |
38025 |
38137 |
- |
RS9741 |
Unspecified |
scaffold8397 |
38311 |
38427 |
+ |
RS285 |
Unspecified |
scaffold8397 |
39192 |
39308 |
+ |
RS15902 |
Unspecified |
scaffold8397 |
39836 |
39854 |
+ |
(A)n |
Simple_repeat |
scaffold8397 |
39914 |
39955 |
+ |
(TGTAT)n |
Simple_repeat |
scaffold8397 |
40493 |
40652 |
+ |
RS2331 |
Unspecified |
scaffold8397 |
40716 |
41101 |
- |
RS148 |
Unspecified |
scaffold8397 |
41176 |
41209 |
+ |
(T)n |
Simple_repeat |
scaffold8397 |
41983 |
42227 |
+ |
RS4 |
Unspecified |
scaffold8397 |
42468 |
42526 |
+ |
GA-rich |
Low_complexity |
scaffold8397 |
42885 |
42924 |
+ |
(CGGACA)n |
Simple_repeat |
scaffold8397 |
43445 |
43507 |
- |
Copia-47_VV-I |
LTR/Copia |
scaffold8397 |
43454 |
43547 |
- |
MuDR-N1_ZM |
DNA/MULE-MuDR |
scaffold8397 |
44030 |
44056 |
+ |
A-rich |
Low_complexity |
scaffold8397 |
44110 |
44164 |
+ |
(TTTAATT)n |
Simple_repeat |
scaffold8397 |
44238 |
44285 |
+ |
RS11051 |
Unspecified |
scaffold8397 |
44286 |
44691 |
+ |
RS11051 |
Unspecified |
scaffold8397 |
44709 |
45093 |
+ |
RS11099 |
Unspecified |
scaffold8397 |
45127 |
45326 |
+ |
RS5573 |
Unspecified |
scaffold8397 |
45388 |
45640 |
+ |
RS3660 |
Unspecified |
scaffold8397 |
45768 |
45932 |
+ |
RS11561 |
Unspecified |
scaffold8397 |
46106 |
46666 |
+ |
RS3954 |
Unspecified |
scaffold8397 |
47726 |
48213 |
+ |
PL6 |
Unspecified |
scaffold8397 |
48245 |
48353 |
+ |
RS12970 |
Unspecified |
scaffold8397 |
48508 |
48714 |
+ |
RS5625 |
Unspecified |
scaffold8397 |
49243 |
49385 |
+ |
RS6228 |
Unspecified |
scaffold8397 |
49751 |
50243 |
- |
RS1085 |
Unspecified |
scaffold8397 |
50210 |
50411 |
+ |
RS334 |
Unspecified |
scaffold8397 |
50237 |
50410 |
+ |
RS1085 |
Unspecified |
scaffold8397 |
50633 |
50686 |
+ |
(TATTTT)n |
Simple_repeat |
scaffold8397 |
53044 |
53070 |
+ |
(T)n |
Simple_repeat |
scaffold8397 |
53770 |
53828 |
+ |
Gypsy-132_ZM-I |
LTR/Gypsy |
scaffold8397 |
54022 |
54069 |
+ |
(ATATAC)n |
Simple_repeat |
scaffold8397 |
54324 |
54397 |
- |
RS432 |
Unspecified |
scaffold8397 |
54589 |
54642 |
+ |
(AT)n |
Simple_repeat |
scaffold8397 |
55161 |
55203 |
+ |
PL673 |
Unspecified |
scaffold8397 |
55400 |
55654 |
+ |
Gypsy-72_GM-I |
LTR/Gypsy |
scaffold8397 |
55527 |
55654 |
+ |
Gypsy-72_GM-I |
LTR/Gypsy |
scaffold8397 |
56341 |
56520 |
+ |
RS14167 |
Unspecified |
scaffold8397 |
56524 |
56583 |
- |
RS12357 |
Unspecified |
scaffold8397 |
56526 |
56591 |
- |
RS13929 |
Unspecified |
scaffold8397 |
56533 |
56591 |
- |
RS93 |
Unspecified |
scaffold8397 |
57047 |
57125 |
+ |
RS837 |
Unspecified |
scaffold8397 |
57189 |
57278 |
+ |
(ATCCAA)n |
Simple_repeat |
scaffold8397 |
57452 |
57542 |
+ |
(TGGATA)n |
Simple_repeat |
scaffold8397 |
57619 |
57791 |
- |
RS2160 |
Unspecified |
scaffold8397 |
58826 |
58880 |
+ |
A-rich |
Low_complexity |
scaffold8397 |
58909 |
58979 |
- |
RS15016 |
Unspecified |
scaffold8397 |
59470 |
59536 |
+ |
(ATCTA)n |
Simple_repeat |
scaffold8397 |
59608 |
59707 |
+ |
(TTAATA)n |
Simple_repeat |
scaffold8397 |
59832 |
59857 |
+ |
(AATAA)n |
Simple_repeat |
scaffold8397 |
60648 |
60684 |
+ |
(ATTTTT)n |
Simple_repeat |
scaffold8397 |
60864 |
61129 |
+ |
RS3651 |
Unspecified |
scaffold8397 |
61128 |
61210 |
+ |
RS533 |
Unspecified |
scaffold8397 |
61351 |
61388 |
+ |
(ATTTGAT)n |
Simple_repeat |
scaffold8397 |
61457 |
61759 |
+ |
PL470 |
Unspecified |
scaffold8397 |
61822 |
61858 |
+ |
(TAATAT)n |
Simple_repeat |
scaffold8397 |
61882 |
61928 |
+ |
(ATTTAA)n |
Simple_repeat |