scaffold8454 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold8454 |
590 |
617 |
+ |
(AT)n |
Simple_repeat |
| scaffold8454 |
1011 |
1034 |
+ |
(A)n |
Simple_repeat |
| scaffold8454 |
2444 |
2494 |
+ |
(TAT)n |
Simple_repeat |
| scaffold8454 |
3032 |
3058 |
+ |
(A)n |
Simple_repeat |
| scaffold8454 |
3060 |
3092 |
+ |
(T)n |
Simple_repeat |
| scaffold8454 |
4672 |
4717 |
+ |
(CCGCC)n |
Simple_repeat |
| scaffold8454 |
7615 |
7641 |
+ |
(TTA)n |
Simple_repeat |
| scaffold8454 |
8106 |
8217 |
+ |
RS9066 |
Unspecified |
| scaffold8454 |
8135 |
8385 |
+ |
RS581 |
Unspecified |
| scaffold8454 |
11583 |
11655 |
+ |
(ATTTTT)n |
Simple_repeat |
| scaffold8454 |
12558 |
12604 |
+ |
(ATATAG)n |
Simple_repeat |
| scaffold8454 |
12571 |
12613 |
+ |
(TTTGT)n |
Simple_repeat |
| scaffold8454 |
12686 |
12715 |
+ |
(ATA)n |
Simple_repeat |
| scaffold8454 |
14700 |
14891 |
+ |
RS12287 |
Unspecified |
| scaffold8454 |
16818 |
16854 |
+ |
(T)n |
Simple_repeat |
| scaffold8454 |
16855 |
16868 |
+ |
(ATGTTTT)n |
Simple_repeat |
| scaffold8454 |
18524 |
18699 |
+ |
RS18243 |
Unspecified |
| scaffold8454 |
20260 |
20360 |
- |
RS3380 |
Unspecified |
| scaffold8454 |
20278 |
20521 |
+ |
RS376 |
Unspecified |
| scaffold8454 |
20555 |
20583 |
+ |
(ATTAT)n |
Simple_repeat |
| scaffold8454 |
22071 |
22107 |
+ |
(TTCTCTA)n |
Simple_repeat |
| scaffold8454 |
22401 |
22419 |
+ |
(A)n |
Simple_repeat |
| scaffold8454 |
23750 |
23794 |
+ |
(CATCTT)n |
Simple_repeat |
| scaffold8454 |
25003 |
25176 |
+ |
RS79 |
Unspecified |
| scaffold8454 |
25230 |
25255 |
+ |
(A)n |
Simple_repeat |
| scaffold8454 |
26119 |
26133 |
+ |
(AATTATT)n |
Simple_repeat |
| scaffold8454 |
26134 |
26165 |
+ |
(ATTG)n |
Simple_repeat |
| scaffold8454 |
26166 |
26177 |
+ |
(AATTATT)n |
Simple_repeat |
| scaffold8454 |
28887 |
28986 |
+ |
PL147 |
Unspecified |
| scaffold8454 |
29041 |
29091 |
+ |
(AATTTT)n |
Simple_repeat |
| scaffold8454 |
29180 |
29226 |
+ |
(ATTTCA)n |
Simple_repeat |
| scaffold8454 |
29621 |
29681 |
+ |
A-rich |
Low_complexity |
| scaffold8454 |
29621 |
29749 |
+ |
A-rich |
Low_complexity |
| scaffold8454 |
29655 |
29749 |
+ |
PL52 |
Unspecified |
| scaffold8454 |
30042 |
30081 |
+ |
(TATTAA)n |
Simple_repeat |
| scaffold8454 |
30436 |
30847 |
+ |
PL3 |
Unspecified |
| scaffold8454 |
31569 |
31616 |
+ |
(GAAGAT)n |
Simple_repeat |
| scaffold8454 |
35976 |
36175 |
- |
RS12660 |
Unspecified |
| scaffold8454 |
35983 |
36222 |
- |
RS9509 |
Unspecified |
| scaffold8454 |
36010 |
36415 |
- |
RS590 |
Unspecified |
| scaffold8454 |
36486 |
36734 |
- |
RS601 |
Unspecified |
| scaffold8454 |
40496 |
40672 |
- |
PL301 |
Unspecified |
| scaffold8454 |
41116 |
41212 |
- |
RS1726 |
Unspecified |
| scaffold8454 |
42370 |
42517 |
+ |
RS614 |
Unspecified |
| scaffold8454 |
42927 |
43061 |
- |
RS8536 |
Unspecified |
| scaffold8454 |
43155 |
43172 |
+ |
(A)n |
Simple_repeat |
| scaffold8454 |
43715 |
43752 |
+ |
(TAT)n |
Simple_repeat |
| scaffold8454 |
46381 |
46668 |
- |
LINE |
LINE(TransposonPSI) |
| scaffold8454 |
47460 |
47713 |
- |
RS4 |
Unspecified |
| scaffold8454 |
48148 |
48174 |
+ |
(TTAT)n |
Simple_repeat |
| scaffold8454 |
48641 |
48733 |
+ |
(AGATGA)n |
Simple_repeat |
| scaffold8454 |
48793 |
48828 |
- |
RS290 |
Unspecified |
| scaffold8454 |
48798 |
49105 |
+ |
RS290 |
Unspecified |
| scaffold8454 |
49197 |
49240 |
+ |
A-rich |
Low_complexity |
| scaffold8454 |
49404 |
49456 |
- |
RS3756 |
Unspecified |
| scaffold8454 |
49715 |
49807 |
+ |
RS4127 |
Unspecified |
| scaffold8454 |
51712 |
51783 |
+ |
(TTATTT)n |
Simple_repeat |
| scaffold8454 |
51760 |
51785 |
+ |
(T)n |
Simple_repeat |
| scaffold8454 |
52060 |
52077 |
+ |
(TA)n |
Simple_repeat |
| scaffold8454 |
52274 |
52325 |
+ |
(TTT)n |
Simple_repeat |
| scaffold8454 |
53494 |
53516 |
+ |
(AATT)n |
Simple_repeat |
| scaffold8454 |
53914 |
53954 |
+ |
(AATAA)n |
Simple_repeat |
| scaffold8454 |
54458 |
54497 |
+ |
(ATTT)n |
Simple_repeat |
| scaffold8454 |
54512 |
54549 |
+ |
(TTGTAGC)n |
Simple_repeat |
| scaffold8454 |
54590 |
54628 |
+ |
(ATTAACA)n |
Simple_repeat |
| scaffold8454 |
54940 |
55013 |
+ |
Copia-3_PTri-I |
LTR/Copia |
| scaffold8454 |
55014 |
55189 |
+ |
Copia-3_PTri-I |
LTR/Copia |
| scaffold8454 |
55494 |
55578 |
+ |
(TCAATA)n |
Simple_repeat |
| scaffold8454 |
55693 |
55787 |
+ |
RS18022 |
Unspecified |
| scaffold8454 |
55703 |
55849 |
+ |
RS115 |
Unspecified |
| scaffold8454 |
59195 |
59223 |
+ |
(TAATT)n |
Simple_repeat |
| scaffold8454 |
60143 |
60170 |
+ |
(A)n |
Simple_repeat |
| scaffold8454 |
62342 |
62362 |
+ |
(A)n |
Simple_repeat |
| scaffold8454 |
64982 |
65015 |
+ |
(AAAAT)n |
Simple_repeat |
| scaffold8454 |
65575 |
65695 |
+ |
RS5910 |
Unspecified |
| scaffold8454 |
65754 |
65867 |
- |
RS622 |
Unspecified |
| scaffold8454 |
65849 |
65947 |
- |
RS622 |
Unspecified |
| scaffold8454 |
66461 |
66590 |
- |
RS12030 |
Unspecified |
| scaffold8454 |
66668 |
66691 |
+ |
(T)n |
Simple_repeat |
| scaffold8454 |
66926 |
66958 |
+ |
(ACC)n |
Simple_repeat |
| scaffold8454 |
69266 |
69556 |
- |
RS588 |
Unspecified |
| scaffold8454 |
69567 |
69606 |
+ |
(TTACATG)n |
Simple_repeat |
| scaffold8454 |
70871 |
71226 |
+ |
RS1461 |
Unspecified |
| scaffold8454 |
70922 |
71288 |
+ |
RS1906 |
Unspecified |
| scaffold8454 |
72861 |
72880 |
+ |
(A)n |
Simple_repeat |
| scaffold8454 |
73299 |
73317 |
+ |
(T)n |
Simple_repeat |
| scaffold8454 |
76365 |
76426 |
- |
SINE2-1_PD |
SINE/tRNA-RTE |
| scaffold8454 |
77899 |
78053 |
- |
PL582 |
Unspecified |
| scaffold8454 |
78046 |
78175 |
+ |
PL261 |
Unspecified |
| scaffold8454 |
78047 |
78158 |
- |
RS25 |
Unspecified |
| scaffold8454 |
78117 |
78253 |
- |
PL856 |
Unspecified |
| scaffold8454 |
78117 |
78289 |
+ |
PL582 |
Unspecified |
| scaffold8454 |
78128 |
78249 |
- |
RS25 |
Unspecified |
| scaffold8454 |
78351 |
78595 |
+ |
RS4 |
Unspecified |
| scaffold8454 |
78602 |
78977 |
+ |
RS322 |
Unspecified |
| scaffold8454 |
79069 |
79094 |
+ |
(T)n |
Simple_repeat |
| scaffold8454 |
79342 |
79413 |
+ |
(TTTTA)n |
Simple_repeat |
| scaffold8454 |
79477 |
79626 |
- |
RS47 |
Unspecified |
| scaffold8454 |
79898 |
79929 |
+ |
(T)n |
Simple_repeat |
| scaffold8454 |
80343 |
80381 |
+ |
(TTCCT)n |
Simple_repeat |
| scaffold8454 |
85231 |
85295 |
+ |
(TTTTCTT)n |
Simple_repeat |
| scaffold8454 |
85454 |
85482 |
+ |
A-rich |
Low_complexity |
| scaffold8454 |
86730 |
86784 |
+ |
GA-rich |
Low_complexity |
| scaffold8454 |
89315 |
89332 |
+ |
(CCG)n |
Simple_repeat |
| scaffold8454 |
90511 |
90698 |
- |
RS6506 |
Unspecified |
| scaffold8454 |
92951 |
92992 |
- |
LT1_EPa |
LTR? |
| scaffold8454 |
93676 |
93699 |
+ |
(T)n |
Simple_repeat |
| scaffold8454 |
94921 |
94994 |
+ |
RS1921 |
Unspecified |
| scaffold8454 |
95135 |
95191 |
+ |
A-rich |
Low_complexity |
| scaffold8454 |
95593 |
96173 |
- |
RS5442 |
Unspecified |
| scaffold8454 |
96120 |
96924 |
- |
RS5442 |
Unspecified |
| scaffold8454 |
96630 |
97008 |
- |
RS995 |
Unspecified |
| scaffold8454 |
97063 |
97117 |
+ |
A-rich |
Low_complexity |
| scaffold8454 |
97651 |
97720 |
+ |
HAT-N10_Mad |
DNA/hAT-Ac |
| scaffold8454 |
98354 |
98447 |
+ |
RS2293 |
Unspecified |
| scaffold8454 |
99411 |
99835 |
- |
RS458 |
Unspecified |
| scaffold8454 |
99965 |
100328 |
+ |
RS1919 |
Unspecified |
| scaffold8454 |
100438 |
100462 |
+ |
(TAAAA)n |
Simple_repeat |
| scaffold8454 |
100884 |
100952 |
+ |
RS2150 |
Unspecified |
| scaffold8454 |
101045 |
101108 |
- |
RS4378 |
Unspecified |
| scaffold8454 |
103296 |
103479 |
+ |
RS239 |
Unspecified |
| scaffold8454 |
105139 |
105418 |
+ |
RS17600 |
Unspecified |
| scaffold8454 |
106063 |
106388 |
+ |
RS210 |
Unspecified |
| scaffold8454 |
107327 |
107853 |
- |
RS132 |
Unspecified |
| scaffold8454 |
107855 |
107990 |
- |
Copia-2_SL-LTR |
LTR/Copia |
| scaffold8454 |
108249 |
108306 |
+ |
PL117 |
Unspecified |
| scaffold8454 |
109141 |
109172 |
+ |
(ATAAAA)n |
Simple_repeat |
| scaffold8454 |
109229 |
109289 |
- |
RS285 |
Unspecified |
| scaffold8454 |
109305 |
109344 |
+ |
(AT)n |
Simple_repeat |
| scaffold8454 |
112947 |
112977 |
+ |
(A)n |
Simple_repeat |
| scaffold8454 |
113142 |
113170 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold8454 |
113675 |
113750 |
- |
RS512 |
Unspecified |
| scaffold8454 |
114014 |
114038 |
+ |
(T)n |
Simple_repeat |
| scaffold8454 |
115057 |
115077 |
+ |
(A)n |
Simple_repeat |
| scaffold8454 |
115313 |
115331 |
+ |
(AT)n |
Simple_repeat |
| scaffold8454 |
115355 |
115616 |
+ |
RS82 |
Unspecified |
| scaffold8454 |
115641 |
115674 |
+ |
(TAT)n |
Simple_repeat |
| scaffold8454 |
116118 |
116268 |
+ |
(TAA)n |
Simple_repeat |
| scaffold8454 |
116843 |
116918 |
+ |
(AAT)n |
Simple_repeat |
| scaffold8454 |
116973 |
116999 |
+ |
(A)n |
Simple_repeat |
| scaffold8454 |
118842 |
118879 |
+ |
A-rich |
Low_complexity |
| scaffold8454 |
118952 |
119013 |
+ |
RS16975 |
Unspecified |
| scaffold8454 |
119050 |
119089 |
+ |
A-rich |
Low_complexity |
| scaffold8454 |
120804 |
120849 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold8454 |
121281 |
121326 |
+ |
(ATA)n |
Simple_repeat |
| scaffold8454 |
121440 |
121465 |
+ |
(ATT)n |
Simple_repeat |