scaffold8498 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold8498 |
2983 |
3913 |
+ |
RS118 |
Unspecified |
| scaffold8498 |
3968 |
3994 |
+ |
Gypsy-16_Mad-I |
LTR/Gypsy |
| scaffold8498 |
4455 |
4781 |
+ |
MEGY-I_MT |
LTR/Gypsy |
| scaffold8498 |
5150 |
5207 |
+ |
Copia-10_TC-I |
LTR/Copia |
| scaffold8498 |
5242 |
5791 |
+ |
RS3005 |
Unspecified |
| scaffold8498 |
5914 |
6534 |
+ |
MEGY-I_MT |
LTR/Gypsy |
| scaffold8498 |
6764 |
6796 |
+ |
(ATGACG)n |
Simple_repeat |
| scaffold8498 |
7050 |
7090 |
+ |
(TTTTCT)n |
Simple_repeat |
| scaffold8498 |
7903 |
7920 |
+ |
(GTT)n |
Simple_repeat |
| scaffold8498 |
11214 |
11727 |
+ |
PL64 |
Unspecified |
| scaffold8498 |
11793 |
11840 |
+ |
(GTTTCGT)n |
Simple_repeat |
| scaffold8498 |
11793 |
12335 |
+ |
(GTTTCGT)n |
Simple_repeat |
| scaffold8498 |
11826 |
12335 |
- |
RS357 |
Unspecified |
| scaffold8498 |
12623 |
12663 |
+ |
A-rich |
Low_complexity |
| scaffold8498 |
12867 |
13208 |
+ |
PL333 |
Unspecified |
| scaffold8498 |
13355 |
13387 |
+ |
(T)n |
Simple_repeat |
| scaffold8498 |
14419 |
14459 |
+ |
(TA)n |
Simple_repeat |
| scaffold8498 |
14952 |
15153 |
- |
PL460 |
Unspecified |
| scaffold8498 |
15152 |
16110 |
+ |
RS254 |
Unspecified |
| scaffold8498 |
15152 |
15912 |
+ |
PL746 |
Unspecified |
| scaffold8498 |
16418 |
16857 |
- |
PL127 |
Unspecified |
| scaffold8498 |
18460 |
18545 |
+ |
RS767 |
Unspecified |
| scaffold8498 |
18540 |
18581 |
+ |
RS767 |
Unspecified |
| scaffold8498 |
19920 |
19948 |
+ |
(TCT)n |
Simple_repeat |
| scaffold8498 |
20464 |
20642 |
+ |
RS1967 |
Unspecified |
| scaffold8498 |
20777 |
20836 |
+ |
RS1456 |
Unspecified |
| scaffold8498 |
20843 |
21159 |
+ |
RS1456 |
Unspecified |
| scaffold8498 |
20891 |
21225 |
+ |
RS3550 |
Unspecified |
| scaffold8498 |
21234 |
21317 |
- |
Copia-2_SL-LTR |
LTR/Copia |
| scaffold8498 |
22828 |
22863 |
+ |
(TGTTAA)n |
Simple_repeat |
| scaffold8498 |
23775 |
23847 |
- |
RS758 |
Unspecified |
| scaffold8498 |
25014 |
25065 |
+ |
(CCTTC)n |
Simple_repeat |
| scaffold8498 |
25686 |
25727 |
+ |
(T)n |
Simple_repeat |
| scaffold8498 |
26571 |
27118 |
+ |
PL753 |
Unspecified |
| scaffold8498 |
28266 |
28509 |
- |
RS4 |
Unspecified |
| scaffold8498 |
29222 |
29247 |
+ |
(A)n |
Simple_repeat |
| scaffold8498 |
29564 |
29636 |
- |
DNA-TA-1_STu |
DNA/TcMar-Stowaway |
| scaffold8498 |
30104 |
30437 |
- |
RS12023 |
Unspecified |
| scaffold8498 |
32981 |
33069 |
+ |
A-rich |
Low_complexity |
| scaffold8498 |
33136 |
33159 |
+ |
(T)n |
Simple_repeat |
| scaffold8498 |
33238 |
33463 |
+ |
RS639 |
Unspecified |
| scaffold8498 |
33477 |
33509 |
+ |
(TC)n |
Simple_repeat |
| scaffold8498 |
37663 |
37910 |
+ |
RS13195 |
Unspecified |
| scaffold8498 |
37994 |
38372 |
+ |
RS7708 |
Unspecified |
| scaffold8498 |
38192 |
38523 |
+ |
RS6860 |
Unspecified |
| scaffold8498 |
38527 |
38557 |
+ |
(TTATTG)n |
Simple_repeat |
| scaffold8498 |
39301 |
39893 |
+ |
RS2532 |
Unspecified |
| scaffold8498 |
39896 |
40731 |
+ |
RS2532 |
Unspecified |
| scaffold8498 |
40865 |
40961 |
- |
MuDR-2_SBi |
DNA/MULE-MuDR |
| scaffold8498 |
41301 |
41342 |
+ |
(AAT)n |
Simple_repeat |
| scaffold8498 |
41512 |
41532 |
+ |
(AAT)n |
Simple_repeat |
| scaffold8498 |
41652 |
41662 |
+ |
(TCTTCTT)n |
Simple_repeat |
| scaffold8498 |
41663 |
41688 |
+ |
(CTT)n |
Simple_repeat |
| scaffold8498 |
41716 |
41774 |
+ |
(TCA)n |
Simple_repeat |
| scaffold8498 |
42433 |
42739 |
- |
RS806 |
Unspecified |
| scaffold8498 |
42743 |
43056 |
- |
Jittery |
DNA/MULE-MuDR |
| scaffold8498 |
43111 |
43441 |
+ |
RS9793 |
Unspecified |
| scaffold8498 |
43522 |
43553 |
+ |
(GATTGT)n |
Simple_repeat |
| scaffold8498 |
43617 |
44013 |
- |
RS2206 |
Unspecified |
| scaffold8498 |
44132 |
44177 |
+ |
(TTATTG)n |
Simple_repeat |
| scaffold8498 |
44586 |
44615 |
+ |
(AT)n |
Simple_repeat |
| scaffold8498 |
45269 |
45298 |
+ |
(TTTGA)n |
Simple_repeat |
| scaffold8498 |
45972 |
46541 |
+ |
gypsy |
gypsy(TransposonPSI) |
| scaffold8498 |
45999 |
46097 |
+ |
Gypsy-45_STu-I |
LTR/Gypsy |
| scaffold8498 |
46893 |
46941 |
+ |
Gypsy-193_ZM-I |
LTR/Gypsy |
| scaffold8498 |
47048 |
47080 |
+ |
(AAT)n |
Simple_repeat |
| scaffold8498 |
47199 |
47240 |
+ |
(CTT)n |
Simple_repeat |
| scaffold8498 |
47264 |
47322 |
+ |
(TCA)n |
Simple_repeat |
| scaffold8498 |
47394 |
47853 |
- |
PL350 |
Unspecified |
| scaffold8498 |
47892 |
47971 |
+ |
A-rich |
Low_complexity |
| scaffold8498 |
48605 |
48665 |
- |
Gypsy-72-LTR_ZM |
LTR/Gypsy |
| scaffold8498 |
48865 |
48900 |
+ |
(AATTTTT)n |
Simple_repeat |
| scaffold8498 |
49128 |
49175 |
+ |
(TAT)n |
Simple_repeat |
| scaffold8498 |
49867 |
49961 |
+ |
Gypsy-46_STu-I |
LTR/Gypsy |
| scaffold8498 |
50470 |
50502 |
+ |
(TGAGTT)n |
Simple_repeat |
| scaffold8498 |
50677 |
50736 |
+ |
GA-rich |
Low_complexity |
| scaffold8498 |
51085 |
51142 |
+ |
Alfare1_I-int |
LTR/Copia? |
| scaffold8498 |
51086 |
51186 |
+ |
PIGY-I_PS |
LTR/Gypsy |
| scaffold8498 |
51289 |
51332 |
+ |
(A)n |
Simple_repeat |
| scaffold8498 |
51610 |
51713 |
+ |
Copia-10_TC-I |
LTR/Copia |
| scaffold8498 |
51638 |
51740 |
+ |
PIGY-I_PS |
LTR/Gypsy |
| scaffold8498 |
51775 |
51923 |
+ |
Ogre-MT3_I-int |
LTR/Gypsy |
| scaffold8498 |
55586 |
55652 |
+ |
Gypsy1-PTR_I-int |
LTR/Gypsy |
| scaffold8498 |
55830 |
55896 |
+ |
GA-rich |
Low_complexity |
| scaffold8498 |
56081 |
56116 |
+ |
(AATTTTT)n |
Simple_repeat |
| scaffold8498 |
56353 |
56400 |
+ |
(TAT)n |
Simple_repeat |