scaffold8523 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold8523 |
1 |
87 |
+ |
RS1200 |
Unspecified |
| scaffold8523 |
86 |
829 |
- |
RS465 |
Unspecified |
| scaffold8523 |
1010 |
1066 |
+ |
BvL1-2 |
LINE/L1 |
| scaffold8523 |
2576 |
3516 |
+ |
RS696 |
Unspecified |
| scaffold8523 |
5403 |
5740 |
- |
Copia10-VV_I-int |
LTR/Copia |
| scaffold8523 |
6107 |
7030 |
- |
Copia-105_GM-I |
LTR/Copia |
| scaffold8523 |
7153 |
7494 |
- |
Copia-105_GM-I |
LTR/Copia |
| scaffold8523 |
7663 |
8412 |
- |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold8523 |
8509 |
9768 |
- |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold8523 |
8910 |
8980 |
- |
TORTL1 |
LTR/Copia |
| scaffold8523 |
9182 |
9507 |
- |
Copia-105_GM-I |
LTR/Copia |
| scaffold8523 |
9869 |
9966 |
- |
Copia-105_GM-I |
LTR/Copia |
| scaffold8523 |
9945 |
10018 |
+ |
(TGAAC)n |
Simple_repeat |
| scaffold8523 |
10021 |
10077 |
+ |
BvL1-2 |
LINE/L1 |
| scaffold8523 |
10912 |
11528 |
+ |
RS696 |
Unspecified |
| scaffold8523 |
11531 |
11744 |
+ |
RS696 |
Unspecified |
| scaffold8523 |
11973 |
11998 |
+ |
(TGAGA)n |
Simple_repeat |
| scaffold8523 |
12603 |
12767 |
- |
RS133 |
Unspecified |
| scaffold8523 |
12981 |
13022 |
+ |
(TAT)n |
Simple_repeat |
| scaffold8523 |
13689 |
13788 |
+ |
RS18316 |
Unspecified |
| scaffold8523 |
13702 |
13790 |
- |
RS10491 |
Unspecified |
| scaffold8523 |
14104 |
14198 |
- |
RS17262 |
Unspecified |
| scaffold8523 |
14746 |
14788 |
+ |
RS54 |
Unspecified |
| scaffold8523 |
15951 |
16002 |
+ |
(TCC)n |
Simple_repeat |
| scaffold8523 |
20200 |
20286 |
- |
RS3465 |
Unspecified |
| scaffold8523 |
20283 |
20321 |
+ |
(T)n |
Simple_repeat |
| scaffold8523 |
20601 |
20669 |
+ |
RS14970 |
Unspecified |
| scaffold8523 |
20963 |
21039 |
+ |
(TATT)n |
Simple_repeat |
| scaffold8523 |
26396 |
26424 |
+ |
(ACCA)n |
Simple_repeat |
| scaffold8523 |
26967 |
26995 |
+ |
GA-rich |
Low_complexity |
| scaffold8523 |
26996 |
27020 |
+ |
(A)n |
Simple_repeat |
| scaffold8523 |
27512 |
27541 |
+ |
(TTGAA)n |
Simple_repeat |
| scaffold8523 |
27698 |
27736 |
+ |
(T)n |
Simple_repeat |
| scaffold8523 |
29081 |
29148 |
+ |
A-rich |
Low_complexity |
| scaffold8523 |
29488 |
29521 |
+ |
(ATTC)n |
Simple_repeat |
| scaffold8523 |
29695 |
29777 |
+ |
(AACTG)n |
Simple_repeat |
| scaffold8523 |
30147 |
30198 |
+ |
A-rich |
Low_complexity |
| scaffold8523 |
30954 |
31136 |
+ |
RS3756 |
Unspecified |
| scaffold8523 |
31499 |
31573 |
+ |
RS8485 |
Unspecified |
| scaffold8523 |
31840 |
31877 |
+ |
(A)n |
Simple_repeat |
| scaffold8523 |
32343 |
32406 |
- |
RS5561 |
Unspecified |
| scaffold8523 |
33210 |
33274 |
+ |
(TAATT)n |
Simple_repeat |
| scaffold8523 |
33401 |
33488 |
+ |
(TT)n |
Simple_repeat |
| scaffold8523 |
35648 |
35709 |
+ |
(TAT)n |
Simple_repeat |
| scaffold8523 |
35706 |
35800 |
- |
RS16382 |
Unspecified |
| scaffold8523 |
38367 |
38387 |
+ |
Copia-47_VV-I |
LTR/Copia |
| scaffold8523 |
38388 |
38474 |
- |
MuDR-N1_ZM |
DNA/MULE-MuDR |
| scaffold8523 |
41783 |
41820 |
+ |
A-rich |
Low_complexity |
| scaffold8523 |
42447 |
42519 |
+ |
(T)n |
Simple_repeat |
| scaffold8523 |
42460 |
42519 |
+ |
(T)n |
Simple_repeat |
| scaffold8523 |
42497 |
42519 |
+ |
(T)n |
Simple_repeat |
| scaffold8523 |
42497 |
43062 |
+ |
(T)n |
Simple_repeat |
| scaffold8523 |
42511 |
43062 |
+ |
RS2033 |
Unspecified |
| scaffold8523 |
44126 |
44436 |
- |
RS29 |
Unspecified |
| scaffold8523 |
44794 |
44864 |
+ |
(ATCA)n |
Simple_repeat |
| scaffold8523 |
44903 |
44941 |
+ |
(GGTTTCA)n |
Simple_repeat |
| scaffold8523 |
46890 |
46992 |
- |
RS14066 |
Unspecified |
| scaffold8523 |
50326 |
50349 |
+ |
(A)n |
Simple_repeat |
| scaffold8523 |
54163 |
54337 |
- |
RS7802 |
Unspecified |
| scaffold8523 |
54490 |
54524 |
+ |
(TCAATTCC)n |
Simple_repeat |
| scaffold8523 |
54547 |
54593 |
+ |
(TTACTC)n |
Simple_repeat |
| scaffold8523 |
54855 |
54896 |
+ |
(GAACTTA)n |
Simple_repeat |
| scaffold8523 |
57965 |
58360 |
+ |
RS1902 |
Unspecified |
| scaffold8523 |
58418 |
58786 |
- |
RS1720 |
Unspecified |
| scaffold8523 |
58566 |
58785 |
- |
PL835 |
Unspecified |
| scaffold8523 |
59746 |
59767 |
+ |
(T)n |
Simple_repeat |
| scaffold8523 |
59850 |
59867 |
+ |
(T)n |
Simple_repeat |
| scaffold8523 |
59926 |
59957 |
+ |
A-rich |
Low_complexity |
| scaffold8523 |
59978 |
60033 |
+ |
(ACC)n |
Simple_repeat |
| scaffold8523 |
60549 |
60976 |
+ |
(TTAT)n |
Simple_repeat |
| scaffold8523 |
60917 |
60976 |
+ |
(TTAT)n |
Simple_repeat |
| scaffold8523 |
61132 |
61288 |
+ |
RS79 |
Unspecified |
| scaffold8523 |
61463 |
61490 |
+ |
(AAAT)n |
Simple_repeat |
| scaffold8523 |
61759 |
61892 |
- |
RS3561 |
Unspecified |
| scaffold8523 |
61761 |
62029 |
+ |
RS725 |
Unspecified |
| scaffold8523 |
61911 |
62059 |
- |
RS3580 |
Unspecified |
| scaffold8523 |
62957 |
63089 |
+ |
RS9976 |
Unspecified |
| scaffold8523 |
64523 |
64575 |
+ |
(TAT)n |
Simple_repeat |
| scaffold8523 |
64968 |
65411 |
- |
PL330 |
Unspecified |
| scaffold8523 |
66258 |
66317 |
+ |
(ATA)n |
Simple_repeat |
| scaffold8523 |
66326 |
66391 |
+ |
GA-rich |
Low_complexity |
| scaffold8523 |
66326 |
66547 |
+ |
GA-rich |
Low_complexity |