scaffold8778 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold8778 |
1 |
896 |
+ |
RS44 |
Unspecified |
| scaffold8778 |
649 |
1214 |
+ |
RS387 |
Unspecified |
| scaffold8778 |
753 |
1214 |
- |
PL124 |
Unspecified |
| scaffold8778 |
814 |
1214 |
- |
RS430 |
Unspecified |
| scaffold8778 |
2986 |
3073 |
+ |
RS51 |
Unspecified |
| scaffold8778 |
3109 |
3139 |
+ |
(TCT)n |
Simple_repeat |
| scaffold8778 |
3934 |
3977 |
+ |
A-rich |
Low_complexity |
| scaffold8778 |
3995 |
4193 |
- |
PL350 |
Unspecified |
| scaffold8778 |
6014 |
6226 |
+ |
RS403 |
Unspecified |
| scaffold8778 |
6123 |
6714 |
- |
RS14 |
Unspecified |
| scaffold8778 |
6712 |
6985 |
+ |
RS7664 |
Unspecified |
| scaffold8778 |
7048 |
7074 |
+ |
(ATTT)n |
Simple_repeat |
| scaffold8778 |
7603 |
7638 |
+ |
(ATTTTT)n |
Simple_repeat |
| scaffold8778 |
8838 |
8866 |
+ |
A-rich |
Low_complexity |
| scaffold8778 |
9198 |
9473 |
- |
PL469 |
Unspecified |
| scaffold8778 |
9475 |
9500 |
+ |
(T)n |
Simple_repeat |
| scaffold8778 |
10274 |
10382 |
- |
PL340 |
Unspecified |
| scaffold8778 |
10612 |
10634 |
+ |
(T)n |
Simple_repeat |
| scaffold8778 |
10808 |
10997 |
- |
RS58 |
Unspecified |
| scaffold8778 |
10994 |
11056 |
- |
PL340 |
Unspecified |
| scaffold8778 |
11045 |
11247 |
- |
PL171 |
Unspecified |
| scaffold8778 |
11777 |
11845 |
+ |
(TAATT)n |
Simple_repeat |
| scaffold8778 |
12837 |
12967 |
- |
PL882 |
Unspecified |
| scaffold8778 |
13114 |
13156 |
+ |
(TTTCATG)n |
Simple_repeat |
| scaffold8778 |
13197 |
13252 |
+ |
A-rich |
Low_complexity |
| scaffold8778 |
13535 |
13561 |
+ |
(T)n |
Simple_repeat |
| scaffold8778 |
13582 |
13625 |
+ |
(AGATTT)n |
Simple_repeat |
| scaffold8778 |
13656 |
13688 |
+ |
(AAT)n |
Simple_repeat |
| scaffold8778 |
13746 |
13783 |
+ |
(TA)n |
Simple_repeat |
| scaffold8778 |
13784 |
13813 |
+ |
(TAGA)n |
Simple_repeat |
| scaffold8778 |
13934 |
13977 |
+ |
(TTTGTA)n |
Simple_repeat |
| scaffold8778 |
14853 |
15036 |
+ |
RS15028 |
Unspecified |
| scaffold8778 |
16104 |
16362 |
+ |
RS1377 |
Unspecified |
| scaffold8778 |
17635 |
17866 |
+ |
(TACGTA)n |
Simple_repeat |
| scaffold8778 |
18283 |
18325 |
+ |
(TATT)n |
Simple_repeat |
| scaffold8778 |
18406 |
18880 |
+ |
PL350 |
Unspecified |
| scaffold8778 |
19124 |
19568 |
- |
PL494 |
Unspecified |
| scaffold8778 |
19330 |
19756 |
+ |
RS6195 |
Unspecified |
| scaffold8778 |
20349 |
20411 |
+ |
(TTAGTAA)n |
Simple_repeat |
| scaffold8778 |
20993 |
21791 |
+ |
RS2778 |
Unspecified |
| scaffold8778 |
23778 |
24007 |
- |
PL171 |
Unspecified |
| scaffold8778 |
25808 |
25957 |
- |
PL882 |
Unspecified |
| scaffold8778 |
25920 |
26777 |
- |
PL340 |
Unspecified |
| scaffold8778 |
27152 |
27171 |
+ |
(A)n |
Simple_repeat |
| scaffold8778 |
27764 |
27797 |
+ |
(CT)n |
Simple_repeat |
| scaffold8778 |
29336 |
29710 |
- |
PL476 |
Unspecified |
| scaffold8778 |
31908 |
31950 |
+ |
(AAACTTT)n |
Simple_repeat |
| scaffold8778 |
32012 |
32752 |
- |
Copia-89_VV-I |
LTR/Copia |
| scaffold8778 |
32746 |
36251 |
- |
Copia-89_VV-I |
LTR/Copia |
| scaffold8778 |
36984 |
37389 |
+ |
RS2105 |
Unspecified |
| scaffold8778 |
37666 |
37943 |
+ |
RS42 |
Unspecified |
| scaffold8778 |
38193 |
38212 |
+ |
(T)n |
Simple_repeat |
| scaffold8778 |
39097 |
39324 |
+ |
RS1258 |
Unspecified |
| scaffold8778 |
39097 |
39360 |
- |
RS17 |
Unspecified |
| scaffold8778 |
40192 |
40241 |
+ |
A-rich |
Low_complexity |
| scaffold8778 |
40488 |
40565 |
+ |
(T)n |
Simple_repeat |
| scaffold8778 |
40766 |
40793 |
+ |
(T)n |
Simple_repeat |
| scaffold8778 |
40887 |
40986 |
+ |
(ATATTT)n |
Simple_repeat |
| scaffold8778 |
41638 |
41822 |
+ |
RS1295 |
Unspecified |
| scaffold8778 |
41638 |
41796 |
+ |
RS14955 |
Unspecified |
| scaffold8778 |
41930 |
41948 |
+ |
(T)n |
Simple_repeat |
| scaffold8778 |
42627 |
42877 |
+ |
RS8882 |
Unspecified |
| scaffold8778 |
42891 |
43294 |
- |
RS5233 |
Unspecified |
| scaffold8778 |
43157 |
43351 |
+ |
RS7282 |
Unspecified |
| scaffold8778 |
43376 |
43396 |
+ |
(AT)n |
Simple_repeat |
| scaffold8778 |
44065 |
44323 |
+ |
RS6103 |
Unspecified |
| scaffold8778 |
44352 |
44749 |
- |
EnSpm-6_STu |
DNA/CMC-EnSpm |
| scaffold8778 |
44841 |
44874 |
+ |
(TATTTAT)n |
Simple_repeat |
| scaffold8778 |
45032 |
45740 |
- |
EnSpm-6_STu |
DNA/CMC-EnSpm |
| scaffold8778 |
45045 |
45870 |
- |
EnSpm2_PTr |
DNA/En-Spm |
| scaffold8778 |
46265 |
46324 |
- |
EnSpm2_PTr |
DNA/En-Spm |
| scaffold8778 |
46550 |
46634 |
+ |
A-rich |
Low_complexity |
| scaffold8778 |
46719 |
46743 |
+ |
(A)n |
Simple_repeat |
| scaffold8778 |
47369 |
47390 |
+ |
(A)n |
Simple_repeat |
| scaffold8778 |
47778 |
47802 |
+ |
(T)n |
Simple_repeat |
| scaffold8778 |
47897 |
48262 |
+ |
RS8 |
Unspecified |
| scaffold8778 |
48378 |
48413 |
- |
HAT-14_Mad |
DNA/hAT-Tip100 |
| scaffold8778 |
49794 |
49819 |
+ |
(TTTTG)n |
Simple_repeat |
| scaffold8778 |
49838 |
49909 |
+ |
RS46 |
Unspecified |
| scaffold8778 |
49838 |
49893 |
+ |
RS126 |
Unspecified |
| scaffold8778 |
50002 |
50047 |
+ |
(TAT)n |
Simple_repeat |
| scaffold8778 |
50043 |
50115 |
+ |
(CATTACA)n |
Simple_repeat |
| scaffold8778 |
50137 |
50187 |
+ |
(TTGTAAT)n |
Simple_repeat |
| scaffold8778 |
50244 |
50297 |
+ |
(ATT)n |
Simple_repeat |
| scaffold8778 |
50423 |
50461 |
+ |
(TTATTTT)n |
Simple_repeat |
| scaffold8778 |
50700 |
51085 |
+ |
RS126 |
Unspecified |
| scaffold8778 |
51086 |
51914 |
+ |
RS646 |
Unspecified |
| scaffold8778 |
51898 |
52702 |
+ |
RS646 |
Unspecified |
| scaffold8778 |
52947 |
53196 |
+ |
RS2699 |
Unspecified |
| scaffold8778 |
53746 |
53792 |
+ |
(T)n |
Simple_repeat |
| scaffold8778 |
54606 |
54667 |
+ |
(TTTAG)n |
Simple_repeat |
| scaffold8778 |
54974 |
55033 |
+ |
(TGAAGGA)n |
Simple_repeat |
| scaffold8778 |
55158 |
55188 |
+ |
(GTA)n |
Simple_repeat |
| scaffold8778 |
55208 |
55245 |
+ |
(TGTATAT)n |
Simple_repeat |
| scaffold8778 |
55689 |
55740 |
+ |
Gypsy-43_STu-LTR |
LTR/Gypsy |
| scaffold8778 |
55792 |
56152 |
+ |
PL436 |
Unspecified |
| scaffold8778 |
56172 |
56510 |
+ |
RS1034 |
Unspecified |
| scaffold8778 |
57084 |
57133 |
+ |
(TCT)n |
Simple_repeat |
| scaffold8778 |
57846 |
58233 |
+ |
RS466 |
Unspecified |
| scaffold8778 |
58109 |
58372 |
- |
RS11294 |
Unspecified |
| scaffold8778 |
58433 |
58499 |
+ |
(ATATTA)n |
Simple_repeat |
| scaffold8778 |
58666 |
58929 |
- |
RS356 |
Unspecified |
| scaffold8778 |
59032 |
59281 |
+ |
PL565 |
Unspecified |
| scaffold8778 |
59328 |
59475 |
+ |
(AATTTCT)n |
Simple_repeat |
| scaffold8778 |
59328 |
59372 |
+ |
(AATTTCT)n |
Simple_repeat |
| scaffold8778 |
59356 |
59475 |
- |
RS656 |
Unspecified |
| scaffold8778 |
61803 |
62384 |
+ |
PL8 |
Unspecified |
| scaffold8778 |
62566 |
62812 |
- |
RS3073 |
Unspecified |
| scaffold8778 |
62815 |
62833 |
+ |
(T)n |
Simple_repeat |
| scaffold8778 |
62815 |
62995 |
+ |
(T)n |
Simple_repeat |
| scaffold8778 |
62827 |
62995 |
- |
RS3896 |
Unspecified |
| scaffold8778 |
63849 |
63897 |
+ |
(AGTATAA)n |
Simple_repeat |
| scaffold8778 |
66304 |
66336 |
+ |
(TTCGA)n |
Simple_repeat |
| scaffold8778 |
66337 |
66347 |
+ |
(GTTCGA)n |
Simple_repeat |
| scaffold8778 |
66788 |
66803 |
+ |
(TTTTTAT)n |
Simple_repeat |
| scaffold8778 |
66804 |
66848 |
+ |
(TTAT)n |
Simple_repeat |
| scaffold8778 |
67421 |
67776 |
+ |
RS52 |
Unspecified |
| scaffold8778 |
67776 |
67821 |
+ |
A-rich |
Low_complexity |
| scaffold8778 |
68214 |
69095 |
+ |
RS655 |
Unspecified |
| scaffold8778 |
68226 |
68958 |
- |
RS1560 |
Unspecified |
| scaffold8778 |
70278 |
70400 |
+ |
(CAGCT)n |
Simple_repeat |
| scaffold8778 |
70411 |
70444 |
+ |
(TATTAT)n |
Simple_repeat |
| scaffold8778 |
70447 |
70494 |
+ |
(ATA)n |
Simple_repeat |
| scaffold8778 |
70663 |
70746 |
+ |
(ATT)n |
Simple_repeat |
| scaffold8778 |
70788 |
70934 |
+ |
(CAGCT)n |
Simple_repeat |
| scaffold8778 |
71353 |
71410 |
- |
RS15154 |
Unspecified |
| scaffold8778 |
71439 |
71473 |
+ |
(A)n |
Simple_repeat |
| scaffold8778 |
72003 |
72039 |
+ |
(AAT)n |
Simple_repeat |
| scaffold8778 |
72278 |
72523 |
- |
RS782 |
Unspecified |
| scaffold8778 |
72937 |
72992 |
+ |
A-rich |
Low_complexity |
| scaffold8778 |
73608 |
73631 |
+ |
(A)n |
Simple_repeat |
| scaffold8778 |
74723 |
74743 |
+ |
(T)n |
Simple_repeat |
| scaffold8778 |
74953 |
74969 |
+ |
(A)n |
Simple_repeat |
| scaffold8778 |
75590 |
75688 |
- |
RS4272 |
Unspecified |
| scaffold8778 |
77769 |
78041 |
- |
RS96 |
Unspecified |
| scaffold8778 |
78298 |
78504 |
- |
PL501 |
Unspecified |
| scaffold8778 |
78499 |
78665 |
+ |
PL271 |
Unspecified |
| scaffold8778 |
79950 |
79991 |
+ |
(ATT)n |
Simple_repeat |
| scaffold8778 |
80012 |
80072 |
+ |
PIGY-I_PS |
LTR/Gypsy |
| scaffold8778 |
80353 |
80455 |
+ |
RS2696 |
Unspecified |
| scaffold8778 |
80469 |
80695 |
+ |
(CCCGA)n |
Simple_repeat |
| scaffold8778 |
80705 |
80975 |
+ |
ATHATN3 |
DNA/hAT-Ac |
| scaffold8778 |
80878 |
81107 |
+ |
(CCCGA)n |
Simple_repeat |
| scaffold8778 |
81137 |
81179 |
+ |
(T)n |
Simple_repeat |
| scaffold8778 |
81660 |
81676 |
+ |
(A)n |
Simple_repeat |
| scaffold8778 |
83027 |
83140 |
- |
RS285 |
Unspecified |
| scaffold8778 |
83237 |
83275 |
+ |
(AT)n |
Simple_repeat |
| scaffold8778 |
83276 |
83289 |
+ |
(ATCTAT)n |
Simple_repeat |
| scaffold8778 |
83383 |
83505 |
+ |
(TTTAT)n |
Simple_repeat |
| scaffold8778 |
84841 |
85271 |
- |
RS1541 |
Unspecified |
| scaffold8778 |
86368 |
86384 |
+ |
(A)n |
Simple_repeat |
| scaffold8778 |
86385 |
86681 |
+ |
Copia-2_SL-I |
LTR/Copia |
| scaffold8778 |
88902 |
89024 |
+ |
RS11429 |
Unspecified |
| scaffold8778 |
89167 |
89263 |
+ |
A-rich |
Low_complexity |
| scaffold8778 |
89532 |
89541 |
+ |
(GTG)n |
Simple_repeat |
| scaffold8778 |
89542 |
89578 |
+ |
(GGTT)n |
Simple_repeat |
| scaffold8778 |
90238 |
90255 |
+ |
(A)n |
Simple_repeat |
| scaffold8778 |
90324 |
90365 |
+ |
(AATAA)n |
Simple_repeat |
| scaffold8778 |
90365 |
90476 |
+ |
RS14759 |
Unspecified |
| scaffold8778 |
91792 |
92171 |
+ |
RS2219 |
Unspecified |
| scaffold8778 |
92730 |
92977 |
+ |
PL610 |
Unspecified |
| scaffold8778 |
92978 |
93231 |
+ |
RS12573 |
Unspecified |
| scaffold8778 |
95858 |
96436 |
- |
RS13215 |
Unspecified |
| scaffold8778 |
95935 |
96660 |
+ |
RS3540 |
Unspecified |
| scaffold8778 |
96875 |
96957 |
+ |
(TGAAGA)n |
Simple_repeat |
| scaffold8778 |
97223 |
97565 |
- |
PL490 |
Unspecified |
| scaffold8778 |
97625 |
97652 |
+ |
(TA)n |
Simple_repeat |
| scaffold8778 |
97733 |
97856 |
+ |
RS4 |
Unspecified |
| scaffold8778 |
97867 |
97932 |
+ |
(TAA)n |
Simple_repeat |
| scaffold8778 |
98227 |
98258 |
+ |
(TAAAA)n |
Simple_repeat |
| scaffold8778 |
98435 |
98478 |
+ |
(T)n |
Simple_repeat |
| scaffold8778 |
99039 |
99066 |
+ |
(TA)n |
Simple_repeat |
| scaffold8778 |
99147 |
99352 |
+ |
RS4 |
Unspecified |
| scaffold8778 |
99500 |
99522 |
+ |
(T)n |
Simple_repeat |
| scaffold8778 |
100888 |
100924 |
+ |
(ATGAAG)n |
Simple_repeat |
| scaffold8778 |
102406 |
102464 |
- |
hAT-3_STu |
DNA/hAT-Tag1 |
| scaffold8778 |
102846 |
102881 |
+ |
(TTC)n |
Simple_repeat |
| scaffold8778 |
102885 |
103049 |
+ |
RS13237 |
Unspecified |
| scaffold8778 |
103480 |
103498 |
+ |
(T)n |
Simple_repeat |
| scaffold8778 |
104345 |
104512 |
+ |
RS13237 |
Unspecified |
| scaffold8778 |
104799 |
104952 |
+ |
RS4056 |
Unspecified |
| scaffold8778 |
105393 |
105677 |
+ |
RS13627 |
Unspecified |
| scaffold8778 |
105805 |
105895 |
- |
SINE2-1_PD |
SINE/tRNA-RTE |
| scaffold8778 |
105910 |
106007 |
+ |
RS3846 |
Unspecified |
| scaffold8778 |
107827 |
107912 |
- |
Copia-75_ST-I |
LTR/Copia |
| scaffold8778 |
108312 |
108331 |
+ |
(TTA)n |
Simple_repeat |
| scaffold8778 |
108428 |
108445 |
+ |
(A)n |
Simple_repeat |
| scaffold8778 |
108616 |
108712 |
+ |
PL582 |
Unspecified |
| scaffold8778 |
108627 |
109051 |
- |
PL773 |
Unspecified |
| scaffold8778 |
109085 |
109238 |
+ |
RS17860 |
Unspecified |
| scaffold8778 |
109732 |
109874 |
- |
RS1500 |
Unspecified |
| scaffold8778 |
112300 |
113781 |
+ |
LINE |
LINE(TransposonPSI) |
| scaffold8778 |
112381 |
112450 |
+ |
L1-5_GM |
LINE/L1 |
| scaffold8778 |
112658 |
113427 |
+ |
L1-1_GM |
LINE/L1 |
| scaffold8778 |
113582 |
113672 |
+ |
LINE1-46_SBi |
LINE/L1 |
| scaffold8778 |
115880 |
116038 |
+ |
RS32 |
Unspecified |
| scaffold8778 |
116266 |
116361 |
+ |
(AAT)n |
Simple_repeat |
| scaffold8778 |
116362 |
116458 |
- |
EnSpm-34_SBi |
DNA/CMC-EnSpm |
| scaffold8778 |
116405 |
116466 |
+ |
Copia-89_VV-I |
LTR/Copia |
| scaffold8778 |
116497 |
116528 |
+ |
(A)n |
Simple_repeat |
| scaffold8778 |
116627 |
116921 |
+ |
RS10737 |
Unspecified |
| scaffold8778 |
116910 |
116957 |
+ |
RS3663 |
Unspecified |
| scaffold8778 |
116967 |
117122 |
+ |
RS3663 |
Unspecified |
| scaffold8778 |
117322 |
117959 |
+ |
RS3504 |
Unspecified |
| scaffold8778 |
117961 |
118087 |
+ |
RS471 |
Unspecified |
| scaffold8778 |
117961 |
118072 |
+ |
RS1760 |
Unspecified |
| scaffold8778 |
118018 |
118100 |
+ |
RS1760 |
Unspecified |
| scaffold8778 |
118105 |
118151 |
+ |
A-rich |
Low_complexity |