scaffold8789 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold8789 |
944 |
983 |
+ |
(T)n |
Simple_repeat |
| scaffold8789 |
2258 |
2412 |
- |
RS6556 |
Unspecified |
| scaffold8789 |
2303 |
2478 |
- |
RS522 |
Unspecified |
| scaffold8789 |
2887 |
3206 |
- |
RS29 |
Unspecified |
| scaffold8789 |
3596 |
3650 |
+ |
A-rich |
Low_complexity |
| scaffold8789 |
5002 |
5037 |
+ |
(ATAAT)n |
Simple_repeat |
| scaffold8789 |
5878 |
5967 |
- |
RS4475 |
Unspecified |
| scaffold8789 |
5967 |
6365 |
- |
PL436 |
Unspecified |
| scaffold8789 |
7338 |
7358 |
+ |
(TTAAT)n |
Simple_repeat |
| scaffold8789 |
7359 |
7387 |
+ |
(TTAGAAA)n |
Simple_repeat |
| scaffold8789 |
7388 |
7399 |
+ |
(TTAAT)n |
Simple_repeat |
| scaffold8789 |
8469 |
8562 |
- |
RS16382 |
Unspecified |
| scaffold8789 |
8561 |
8581 |
+ |
(TAT)n |
Simple_repeat |
| scaffold8789 |
9416 |
9464 |
+ |
A-rich |
Low_complexity |
| scaffold8789 |
9506 |
10850 |
- |
Gypsy-53_GM-I |
LTR/Gypsy |
| scaffold8789 |
9612 |
9648 |
+ |
RS3756 |
Unspecified |
| scaffold8789 |
10553 |
10599 |
+ |
(A)n |
Simple_repeat |
| scaffold8789 |
14991 |
15146 |
+ |
HAT-4_Mad |
DNA/hAT-Tag1 |
| scaffold8789 |
15475 |
15511 |
+ |
(TTTTT)n |
Simple_repeat |
| scaffold8789 |
15643 |
15700 |
+ |
(ATTA)n |
Simple_repeat |
| scaffold8789 |
16157 |
16195 |
+ |
(A)n |
Simple_repeat |
| scaffold8789 |
16414 |
16451 |
+ |
(ATCCATC)n |
Simple_repeat |
| scaffold8789 |
16549 |
16596 |
+ |
(TATTTATCA)n |
Simple_repeat |
| scaffold8789 |
19176 |
19210 |
+ |
(TTTTAAC)n |
Simple_repeat |
| scaffold8789 |
19790 |
19926 |
- |
RS663 |
Unspecified |
| scaffold8789 |
20140 |
20204 |
+ |
(TT)n |
Simple_repeat |
| scaffold8789 |
23309 |
23328 |
+ |
(T)n |
Simple_repeat |
| scaffold8789 |
25637 |
25655 |
+ |
(T)n |
Simple_repeat |
| scaffold8789 |
28762 |
28833 |
+ |
Copia-31_GM-I |
LTR/Copia |
| scaffold8789 |
29934 |
29979 |
+ |
(TTAA)n |
Simple_repeat |
| scaffold8789 |
30342 |
30667 |
- |
RS557 |
Unspecified |
| scaffold8789 |
30736 |
30771 |
+ |
A-rich |
Low_complexity |
| scaffold8789 |
31060 |
31089 |
+ |
(TAAG)n |
Simple_repeat |
| scaffold8789 |
31351 |
31392 |
+ |
A-rich |
Low_complexity |
| scaffold8789 |
31622 |
31658 |
+ |
A-rich |
Low_complexity |
| scaffold8789 |
31920 |
31969 |
+ |
A-rich |
Low_complexity |
| scaffold8789 |
32004 |
32066 |
+ |
(ACCCGA)n |
Simple_repeat |
| scaffold8789 |
33313 |
33349 |
+ |
(TTG)n |
Simple_repeat |
| scaffold8789 |
33350 |
33403 |
+ |
(ATG)n |
Simple_repeat |
| scaffold8789 |
33659 |
33773 |
- |
RS285 |
Unspecified |
| scaffold8789 |
34961 |
34994 |
+ |
A-rich |
Low_complexity |
| scaffold8789 |
35128 |
35262 |
+ |
RS13868 |
Unspecified |
| scaffold8789 |
35486 |
35697 |
+ |
PL432 |
Unspecified |
| scaffold8789 |
35702 |
35889 |
+ |
RS1523 |
Unspecified |
| scaffold8789 |
35725 |
35998 |
- |
RS1658 |
Unspecified |
| scaffold8789 |
38131 |
38356 |
+ |
(CCCGA)n |
Simple_repeat |
| scaffold8789 |
38600 |
38775 |
+ |
(CCCGA)n |
Simple_repeat |
| scaffold8789 |
39176 |
39202 |
+ |
A-rich |
Low_complexity |
| scaffold8789 |
39528 |
39556 |
+ |
A-rich |
Low_complexity |
| scaffold8789 |
39641 |
39665 |
+ |
(TA)n |
Simple_repeat |
| scaffold8789 |
41006 |
41034 |
+ |
(CAT)n |
Simple_repeat |
| scaffold8789 |
41426 |
41638 |
+ |
RS16405 |
Unspecified |
| scaffold8789 |
41899 |
42003 |
+ |
RS16075 |
Unspecified |
| scaffold8789 |
43403 |
43429 |
+ |
(A)n |
Simple_repeat |
| scaffold8789 |
44140 |
44163 |
+ |
(A)n |
Simple_repeat |
| scaffold8789 |
44530 |
44563 |
+ |
(TATT)n |
Simple_repeat |
| scaffold8789 |
44730 |
44800 |
+ |
(ACTC)n |
Simple_repeat |
| scaffold8789 |
47754 |
47782 |
+ |
(CAT)n |
Simple_repeat |
| scaffold8789 |
48162 |
48374 |
+ |
RS16405 |
Unspecified |
| scaffold8789 |
48637 |
48741 |
+ |
RS16075 |
Unspecified |
| scaffold8789 |
50090 |
50120 |
+ |
(A)n |
Simple_repeat |
| scaffold8789 |
51201 |
51234 |
+ |
(TATT)n |
Simple_repeat |
| scaffold8789 |
51401 |
51431 |
+ |
(ACTC)n |
Simple_repeat |
| scaffold8789 |
55717 |
55745 |
+ |
(AACA)n |
Simple_repeat |
| scaffold8789 |
55746 |
55753 |
+ |
(CAA)n |
Simple_repeat |
| scaffold8789 |
55985 |
56036 |
- |
SZ-55_int-int |
LTR/Copia |
| scaffold8789 |
56278 |
56333 |
+ |
(TTAT)n |
Simple_repeat |
| scaffold8789 |
56397 |
56529 |
+ |
(AATTG)n |
Simple_repeat |
| scaffold8789 |
56818 |
56851 |
+ |
(TAA)n |
Simple_repeat |
| scaffold8789 |
57976 |
58004 |
+ |
(AACAG)n |
Simple_repeat |
| scaffold8789 |
62494 |
62539 |
+ |
(TACTTT)n |
Simple_repeat |
| scaffold8789 |
66631 |
66727 |
- |
RS15482 |
Unspecified |
| scaffold8789 |
68117 |
68153 |
+ |
(AAC)n |
Simple_repeat |
| scaffold8789 |
68255 |
68310 |
+ |
(ATC)n |
Simple_repeat |
| scaffold8789 |
68319 |
68359 |
+ |
(CTA)n |
Simple_repeat |
| scaffold8789 |
68815 |
68858 |
+ |
(T)n |
Simple_repeat |
| scaffold8789 |
68906 |
68958 |
+ |
(TAT)n |
Simple_repeat |
| scaffold8789 |
69938 |
70007 |
+ |
(A)n |
Simple_repeat |
| scaffold8789 |
72131 |
72151 |
+ |
(A)n |
Simple_repeat |
| scaffold8789 |
72131 |
72701 |
+ |
(A)n |
Simple_repeat |
| scaffold8789 |
72148 |
72701 |
- |
PL69 |
Unspecified |
| scaffold8789 |
75703 |
75729 |
+ |
(TCAA)n |
Simple_repeat |
| scaffold8789 |
76036 |
76055 |
+ |
(T)n |
Simple_repeat |
| scaffold8789 |
76060 |
76241 |
- |
PL22 |
Unspecified |
| scaffold8789 |
76242 |
76314 |
+ |
PL492 |
Unspecified |
| scaffold8789 |
76305 |
76404 |
- |
RS4475 |
Unspecified |
| scaffold8789 |
76485 |
76540 |
+ |
(CATC)n |
Simple_repeat |
| scaffold8789 |
76998 |
77192 |
- |
RS509 |
Unspecified |
| scaffold8789 |
78193 |
78325 |
+ |
(TTATT)n |
Simple_repeat |
| scaffold8789 |
78193 |
78247 |
+ |
(TTATT)n |
Simple_repeat |
| scaffold8789 |
78239 |
78325 |
- |
RS16676 |
Unspecified |
| scaffold8789 |
79066 |
79137 |
+ |
(AAT)n |
Simple_repeat |
| scaffold8789 |
79437 |
79544 |
+ |
Copia-2_SL-LTR |
LTR/Copia |
| scaffold8789 |
79848 |
79905 |
+ |
(TTAA)n |
Simple_repeat |
| scaffold8789 |
80058 |
80089 |
+ |
(T)n |
Simple_repeat |
| scaffold8789 |
80153 |
80264 |
- |
RS4475 |
Unspecified |
| scaffold8789 |
80156 |
80240 |
+ |
RS16382 |
Unspecified |
| scaffold8789 |
80491 |
80558 |
+ |
A-rich |
Low_complexity |
| scaffold8789 |
80538 |
80603 |
+ |
(AAT)n |
Simple_repeat |
| scaffold8789 |
80637 |
80735 |
+ |
RS18078 |
Unspecified |
| scaffold8789 |
82206 |
82230 |
+ |
(A)n |
Simple_repeat |
| scaffold8789 |
82231 |
82243 |
+ |
(ATAA)n |
Simple_repeat |
| scaffold8789 |
82685 |
82722 |
+ |
(TCT)n |
Simple_repeat |
| scaffold8789 |
83606 |
83670 |
- |
RS84 |
Unspecified |
| scaffold8789 |
83730 |
83801 |
+ |
(AC)n |
Simple_repeat |
| scaffold8789 |
83862 |
83914 |
+ |
(TA)n |
Simple_repeat |
| scaffold8789 |
83897 |
83945 |
+ |
(ATT)n |
Simple_repeat |
| scaffold8789 |
85191 |
85375 |
- |
RS178 |
Unspecified |
| scaffold8789 |
88532 |
88600 |
+ |
(GAT)n |
Simple_repeat |
| scaffold8789 |
90245 |
90280 |
+ |
(A)n |
Simple_repeat |
| scaffold8789 |
91120 |
91142 |
+ |
(A)n |
Simple_repeat |
| scaffold8789 |
93344 |
93375 |
+ |
(AAT)n |
Simple_repeat |
| scaffold8789 |
94085 |
94277 |
+ |
A-rich |
Low_complexity |
| scaffold8789 |
96256 |
96839 |
- |
RS5648 |
Unspecified |
| scaffold8789 |
97003 |
97056 |
+ |
(CTTTCT)n |
Simple_repeat |
| scaffold8789 |
98041 |
98071 |
+ |
(A)n |
Simple_repeat |
| scaffold8789 |
98538 |
98598 |
+ |
(ATTG)n |
Simple_repeat |
| scaffold8789 |
98609 |
98657 |
+ |
(T)n |
Simple_repeat |
| scaffold8789 |
98664 |
98898 |
+ |
RS18 |
Unspecified |
| scaffold8789 |
101988 |
102012 |
+ |
(A)n |
Simple_repeat |
| scaffold8789 |
102268 |
102405 |
- |
RS1669 |
Unspecified |
| scaffold8789 |
102841 |
102881 |
+ |
(CCG)n |
Simple_repeat |
| scaffold8789 |
103024 |
103057 |
+ |
(TCTTCG)n |
Simple_repeat |
| scaffold8789 |
103172 |
103199 |
+ |
(TGA)n |
Simple_repeat |
| scaffold8789 |
109498 |
109528 |
+ |
(T)n |
Simple_repeat |
| scaffold8789 |
112014 |
112044 |
+ |
(T)n |
Simple_repeat |
| scaffold8789 |
112087 |
112342 |
- |
RS1 |
Unspecified |
| scaffold8789 |
112298 |
112349 |
- |
RS17600 |
Unspecified |
| scaffold8789 |
112447 |
112547 |
+ |
A-rich |
Low_complexity |
| scaffold8789 |
113132 |
113172 |
+ |
(AAAAT)n |
Simple_repeat |
| scaffold8789 |
113244 |
113503 |
- |
RS1 |
Unspecified |
| scaffold8789 |
113569 |
113668 |
- |
RS8095 |
Unspecified |
| scaffold8789 |
116634 |
116657 |
+ |
(T)n |
Simple_repeat |
| scaffold8789 |
117627 |
117673 |
+ |
(TTTTA)n |
Simple_repeat |
| scaffold8789 |
120044 |
120118 |
+ |
RS750 |
Unspecified |
| scaffold8789 |
124712 |
124817 |
+ |
(T)n |
Simple_repeat |
| scaffold8789 |
127392 |
127417 |
+ |
(T)n |
Simple_repeat |
| scaffold8789 |
130024 |
130075 |
+ |
(T)n |
Simple_repeat |
| scaffold8789 |
130261 |
130300 |
+ |
(T)n |
Simple_repeat |
| scaffold8789 |
131480 |
131502 |
+ |
(A)n |
Simple_repeat |
| scaffold8789 |
132037 |
132082 |
+ |
(GAAGTTA)n |
Simple_repeat |
| scaffold8789 |
134001 |
134025 |
+ |
(T)n |
Simple_repeat |
| scaffold8789 |
135337 |
135486 |
+ |
(CAGTT)n |
Simple_repeat |
| scaffold8789 |
137578 |
137601 |
+ |
(A)n |
Simple_repeat |
| scaffold8789 |
137626 |
138088 |
+ |
PL133 |
Unspecified |
| scaffold8789 |
138616 |
138713 |
+ |
(AACTG)n |
Simple_repeat |
| scaffold8789 |
138845 |
138901 |
- |
RS3756 |
Unspecified |
| scaffold8789 |
138949 |
138985 |
+ |
(A)n |
Simple_repeat |
| scaffold8789 |
139412 |
139485 |
+ |
PL477 |
Unspecified |
| scaffold8789 |
139569 |
139905 |
+ |
PL580 |
Unspecified |
| scaffold8789 |
139577 |
139961 |
+ |
PL304 |
Unspecified |
| scaffold8789 |
139993 |
140034 |
+ |
(T)n |
Simple_repeat |
| scaffold8789 |
140301 |
140334 |
+ |
GA-rich |
Low_complexity |
| scaffold8789 |
140350 |
140409 |
+ |
PL601 |
Unspecified |
| scaffold8789 |
140682 |
140732 |
+ |
(AAATA)n |
Simple_repeat |
| scaffold8789 |
141117 |
141152 |
+ |
(TTAA)n |
Simple_repeat |
| scaffold8789 |
145413 |
145427 |
+ |
(AGCTG)n |
Simple_repeat |
| scaffold8789 |
145428 |
145499 |
+ |
(GAACT)n |
Simple_repeat |
| scaffold8789 |
145500 |
145587 |
+ |
(AGCTG)n |
Simple_repeat |
| scaffold8789 |
145835 |
145895 |
+ |
GA-rich |
Low_complexity |
| scaffold8789 |
146542 |
146804 |
- |
RS240 |
Unspecified |
| scaffold8789 |
147123 |
147290 |
+ |
RS5 |
Unspecified |
| scaffold8789 |
147289 |
147364 |
+ |
RS5 |
Unspecified |
| scaffold8789 |
147719 |
147813 |
+ |
(AATTTC)n |
Simple_repeat |
| scaffold8789 |
147837 |
147875 |
+ |
(TTTATAA)n |
Simple_repeat |
| scaffold8789 |
148199 |
148302 |
+ |
(AATTAA)n |
Simple_repeat |
| scaffold8789 |
148337 |
148357 |
+ |
(A)n |
Simple_repeat |
| scaffold8789 |
148513 |
148552 |
+ |
(TAATAT)n |
Simple_repeat |
| scaffold8789 |
149080 |
149198 |
- |
PL754 |
Unspecified |
| scaffold8789 |
149101 |
149194 |
- |
RS16382 |
Unspecified |
| scaffold8789 |
149588 |
149826 |
- |
RS3114 |
Unspecified |
| scaffold8789 |
149736 |
150067 |
- |
RS3809 |
Unspecified |
| scaffold8789 |
150187 |
150227 |
+ |
(TTTCGT)n |
Simple_repeat |
| scaffold8789 |
150386 |
150893 |
+ |
Gypsy-72_GM-I |
LTR/Gypsy |
| scaffold8789 |
151058 |
154544 |
+ |
Gypsy-72_GM-I |
LTR/Gypsy |
| scaffold8789 |
154545 |
154785 |
- |
RS3114 |
Unspecified |
| scaffold8789 |
154693 |
155022 |
- |
RS3809 |
Unspecified |
| scaffold8789 |
155142 |
155182 |
+ |
(TTTCGT)n |
Simple_repeat |
| scaffold8789 |
155971 |
156001 |
+ |
A-rich |
Low_complexity |
| scaffold8789 |
157624 |
157718 |
+ |
LTR-7_Mad-LTR |
LTR |
| scaffold8789 |
158425 |
158456 |
+ |
A-rich |
Low_complexity |
| scaffold8789 |
158766 |
158800 |
+ |
(T)n |
Simple_repeat |
| scaffold8789 |
158835 |
158997 |
+ |
ATHATN10 |
DNA/hAT |
| scaffold8789 |
160057 |
160092 |
+ |
(ATTCA)n |
Simple_repeat |
| scaffold8789 |
160745 |
160981 |
- |
RS193 |
Unspecified |
| scaffold8789 |
161169 |
161231 |
+ |
(CCA)n |
Simple_repeat |
| scaffold8789 |
161346 |
161396 |
+ |
(TCTCTT)n |
Simple_repeat |
| scaffold8789 |
161844 |
161953 |
+ |
RS968 |
Unspecified |
| scaffold8789 |
161858 |
161953 |
- |
RS3066 |
Unspecified |
| scaffold8789 |
161998 |
162162 |
+ |
(AGCTG)n |
Simple_repeat |
| scaffold8789 |
162184 |
162223 |
+ |
(ACGGAC)n |
Simple_repeat |
| scaffold8789 |
162642 |
162733 |
- |
hAT-9_SBi |
DNA/hAT-Tag1 |
| scaffold8789 |
162732 |
162825 |
- |
PL517 |
Unspecified |
| scaffold8789 |
162733 |
162808 |
- |
PL517 |
Unspecified |
| scaffold8789 |
162834 |
162923 |
+ |
(AAT)n |
Simple_repeat |
| scaffold8789 |
162934 |
163042 |
+ |
(TAA)n |
Simple_repeat |
| scaffold8789 |
163326 |
163370 |
+ |
(AAAAATA)n |
Simple_repeat |
| scaffold8789 |
163326 |
163451 |
+ |
(AAAAATA)n |
Simple_repeat |
| scaffold8789 |
163362 |
163451 |
- |
RS4835 |
Unspecified |
| scaffold8789 |
167581 |
167616 |
+ |
(ATTAATA)n |
Simple_repeat |
| scaffold8789 |
167661 |
168107 |
- |
PL2 |
Unspecified |
| scaffold8789 |
169493 |
169648 |
- |
ATCopia34_LTR |
LTR/Copia |
| scaffold8789 |
169776 |
169886 |
- |
Copia-2_SL-LTR |
LTR/Copia |
| scaffold8789 |
172072 |
172120 |
+ |
A-rich |
Low_complexity |
| scaffold8789 |
172191 |
172409 |
+ |
RS7244 |
Unspecified |
| scaffold8789 |
172752 |
172854 |
+ |
RS4475 |
Unspecified |
| scaffold8789 |
172906 |
173165 |
- |
RS47 |
Unspecified |
| scaffold8789 |
173632 |
173964 |
- |
RS1716 |
Unspecified |
| scaffold8789 |
173677 |
174291 |
- |
PL757 |
Unspecified |
| scaffold8789 |
174416 |
174461 |
+ |
A-rich |
Low_complexity |
| scaffold8789 |
175279 |
175308 |
+ |
(T)n |
Simple_repeat |
| scaffold8789 |
177461 |
177574 |
- |
RS1488 |
Unspecified |
| scaffold8789 |
177706 |
177722 |
+ |
(T)n |
Simple_repeat |
| scaffold8789 |
180248 |
180287 |
+ |
A-rich |
Low_complexity |
| scaffold8789 |
180552 |
180635 |
+ |
(CCA)n |
Simple_repeat |
| scaffold8789 |
181835 |
181944 |
- |
SHAMET |
DNA/TcMar-Stowaway |
| scaffold8789 |
182076 |
182121 |
+ |
(GAATTTA)n |
Simple_repeat |
| scaffold8789 |
182630 |
182666 |
+ |
(ATCTTA)n |
Simple_repeat |
| scaffold8789 |
182630 |
182795 |
+ |
(ATCTTA)n |
Simple_repeat |
| scaffold8789 |
182651 |
182795 |
+ |
RS2426 |
Unspecified |
| scaffold8789 |
183370 |
183417 |
- |
STOWAWAY2_ZM |
DNA/TcMar-Stowaway |
| scaffold8789 |
183465 |
183581 |
- |
RS13663 |
Unspecified |
| scaffold8789 |
184504 |
184530 |
+ |
(T)n |
Simple_repeat |
| scaffold8789 |
185491 |
185596 |
- |
RS3146 |
Unspecified |
| scaffold8789 |
185849 |
185971 |
+ |
PL276 |
Unspecified |
| scaffold8789 |
186040 |
186122 |
+ |
(TAATT)n |
Simple_repeat |
| scaffold8789 |
186257 |
186431 |
- |
RS179 |
Unspecified |
| scaffold8789 |
186432 |
186564 |
+ |
RS14068 |
Unspecified |
| scaffold8789 |
186533 |
186603 |
+ |
RS14068 |
Unspecified |
| scaffold8789 |
186907 |
186979 |
- |
RS556 |
Unspecified |
| scaffold8789 |
187081 |
187114 |
+ |
(TCTTCA)n |
Simple_repeat |
| scaffold8789 |
187534 |
187559 |
+ |
(AGG)n |
Simple_repeat |
| scaffold8789 |
192169 |
192280 |
- |
RS12747 |
Unspecified |
| scaffold8789 |
197928 |
198039 |
- |
RS12747 |
Unspecified |
| scaffold8789 |
198440 |
198534 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold8789 |
198838 |
198882 |
+ |
(TTTTA)n |
Simple_repeat |
| scaffold8789 |
199263 |
199281 |
+ |
(AAG)n |
Simple_repeat |
| scaffold8789 |
199357 |
199550 |
+ |
PL609 |
Unspecified |
| scaffold8789 |
199410 |
199552 |
+ |
RS280 |
Unspecified |
| scaffold8789 |
199631 |
199667 |
+ |
(ATAATCT)n |
Simple_repeat |
| scaffold8789 |
199631 |
200172 |
+ |
(ATAATCT)n |
Simple_repeat |
| scaffold8789 |
199656 |
200172 |
+ |
RS3354 |
Unspecified |
| scaffold8789 |
200230 |
200288 |
+ |
(TCC)n |
Simple_repeat |
| scaffold8789 |
200560 |
200798 |
- |
RS3096 |
Unspecified |
| scaffold8789 |
200769 |
200956 |
- |
RS8990 |
Unspecified |
| scaffold8789 |
201573 |
201616 |
+ |
(ATT)n |
Simple_repeat |
| scaffold8789 |
204235 |
204339 |
+ |
RS13525 |
Unspecified |
| scaffold8789 |
204571 |
205140 |
+ |
RS14306 |
Unspecified |
| scaffold8789 |
205405 |
205499 |
+ |
RS536 |
Unspecified |
| scaffold8789 |
205796 |
205875 |
+ |
A-rich |
Low_complexity |
| scaffold8789 |
206124 |
206362 |
+ |
RS606 |
Unspecified |
| scaffold8789 |
206677 |
207004 |
+ |
RS12252 |
Unspecified |
| scaffold8789 |
206897 |
207019 |
+ |
RS17257 |
Unspecified |
| scaffold8789 |
207434 |
207492 |
+ |
GA-rich |
Low_complexity |
| scaffold8789 |
207587 |
207727 |
- |
RS1974 |
Unspecified |
| scaffold8789 |
208339 |
208532 |
+ |
RS606 |
Unspecified |
| scaffold8789 |
208839 |
208922 |
+ |
Copia-3_PTri-I |
LTR/Copia |
| scaffold8789 |
209590 |
209615 |
+ |
(T)n |
Simple_repeat |
| scaffold8789 |
209842 |
209925 |
+ |
(TTTT)n |
Simple_repeat |
| scaffold8789 |
210741 |
210863 |
+ |
L1-11_STu |
LINE/L1 |
| scaffold8789 |
211004 |
211662 |
+ |
LINE1-54_SBi |
LINE/L1 |
| scaffold8789 |
211659 |
211779 |
- |
PL809 |
Unspecified |
| scaffold8789 |
212284 |
212475 |
+ |
RS31 |
Unspecified |
| scaffold8789 |
212477 |
212739 |
+ |
L1-1_EPa |
LINE/L1 |
| scaffold8789 |
212819 |
213255 |
+ |
L1-9_Mad |
LINE/L1 |
| scaffold8789 |
213276 |
214173 |
- |
RS76 |
Unspecified |
| scaffold8789 |
213276 |
214019 |
+ |
RS886 |
Unspecified |
| scaffold8789 |
214168 |
214461 |
+ |
L1-9_Mad |
LINE/L1 |
| scaffold8789 |
215838 |
215861 |
+ |
(A)n |
Simple_repeat |
| scaffold8789 |
216083 |
216192 |
- |
RS12747 |
Unspecified |
| scaffold8789 |
220611 |
220708 |
- |
LTR-7_Mad-LTR |
LTR |
| scaffold8789 |
220823 |
220934 |
- |
RS12747 |
Unspecified |
| scaffold8789 |
221738 |
221798 |
+ |
(AATAATG)n |
Simple_repeat |
| scaffold8789 |
221908 |
221937 |
+ |
(TTTTTG)n |
Simple_repeat |
| scaffold8789 |
222416 |
222432 |
+ |
(T)n |
Simple_repeat |
| scaffold8789 |
222477 |
222543 |
- |
RS41 |
Unspecified |
| scaffold8789 |
227051 |
227082 |
+ |
(TTA)n |
Simple_repeat |
| scaffold8789 |
229335 |
229407 |
+ |
(AACTG)n |
Simple_repeat |
| scaffold8789 |
230567 |
230603 |
+ |
(TTAT)n |
Simple_repeat |
| scaffold8789 |
230626 |
230662 |
+ |
(TCATAA)n |
Simple_repeat |
| scaffold8789 |
231711 |
231876 |
- |
RS79 |
Unspecified |
| scaffold8789 |
232078 |
232106 |
+ |
(T)n |
Simple_repeat |
| scaffold8789 |
232107 |
232114 |
+ |
(TTTTTGT)n |
Simple_repeat |
| scaffold8789 |
232612 |
232756 |
+ |
RS573 |
Unspecified |
| scaffold8789 |
232684 |
232788 |
+ |
RS333 |
Unspecified |
| scaffold8789 |
232799 |
232829 |
+ |
(TGT)n |
Simple_repeat |
| scaffold8789 |
234915 |
235028 |
- |
RS2100 |
Unspecified |
| scaffold8789 |
235291 |
235309 |
+ |
(CAC)n |
Simple_repeat |
| scaffold8789 |
235549 |
235611 |
+ |
Copia-25_BRa-I |
LTR/Copia |
| scaffold8789 |
236716 |
236763 |
+ |
(A)n |
Simple_repeat |
| scaffold8789 |
238045 |
238196 |
+ |
(AAGTTTTCTG)n |
Simple_repeat |
| scaffold8789 |
238207 |
238255 |
+ |
(ATT)n |
Simple_repeat |
| scaffold8789 |
238481 |
238521 |
+ |
(ATTTA)n |
Simple_repeat |
| scaffold8789 |
238517 |
238540 |
+ |
(ATA)n |
Simple_repeat |
| scaffold8789 |
238541 |
238577 |
+ |
(AGCAAC)n |
Simple_repeat |
| scaffold8789 |
238578 |
238620 |
+ |
(ATA)n |
Simple_repeat |
| scaffold8789 |
238700 |
238804 |
+ |
(TTA)n |
Simple_repeat |
| scaffold8789 |
239520 |
239896 |
+ |
PL683 |
Unspecified |
| scaffold8789 |
239889 |
240536 |
+ |
RS758 |
Unspecified |
| scaffold8789 |
240536 |
240567 |
+ |
(TTAT)n |
Simple_repeat |
| scaffold8789 |
240572 |
240626 |
+ |
(TCTGAAGTTT)n |
Simple_repeat |
| scaffold8789 |
244393 |
244411 |
+ |
(AGC)n |
Simple_repeat |
| scaffold8789 |
244430 |
244465 |
+ |
(TTC)n |
Simple_repeat |
| scaffold8789 |
245408 |
245458 |
+ |
A-rich |
Low_complexity |
| scaffold8789 |
245584 |
245622 |
+ |
A-rich |
Low_complexity |
| scaffold8789 |
246318 |
246340 |
+ |
(TAAA)n |
Simple_repeat |
| scaffold8789 |
246424 |
246694 |
- |
RS356 |
Unspecified |
| scaffold8789 |
247618 |
247645 |
+ |
(T)n |
Simple_repeat |
| scaffold8789 |
249066 |
249139 |
+ |
RS15240 |
Unspecified |
| scaffold8789 |
249452 |
249722 |
+ |
A-rich |
Low_complexity |
| scaffold8789 |
249452 |
249493 |
+ |
A-rich |
Low_complexity |
| scaffold8789 |
249486 |
249722 |
- |
RS4 |
Unspecified |
| scaffold8789 |
249723 |
249791 |
+ |
(A)n |
Simple_repeat |
| scaffold8789 |
250044 |
250098 |
+ |
(TT)n |
Simple_repeat |
| scaffold8789 |
250568 |
250624 |
+ |
(TTTTAGT)n |
Simple_repeat |
| scaffold8789 |
251324 |
251357 |
+ |
(TTATT)n |
Simple_repeat |
| scaffold8789 |
254340 |
254374 |
+ |
(TTGTTTC)n |
Simple_repeat |
| scaffold8789 |
256575 |
256739 |
+ |
SHAMET |
DNA/TcMar-Stowaway |
| scaffold8789 |
257424 |
257440 |
+ |
(A)n |
Simple_repeat |
| scaffold8789 |
265862 |
265922 |
+ |
(TGT)n |
Simple_repeat |
| scaffold8789 |
266889 |
266937 |
+ |
(AATTTAA)n |
Simple_repeat |
| scaffold8789 |
267379 |
267598 |
+ |
RS614 |
Unspecified |
| scaffold8789 |
267948 |
268188 |
+ |
RS445 |
Unspecified |
| scaffold8789 |
268537 |
268580 |
+ |
A-rich |
Low_complexity |
| scaffold8789 |
270385 |
270442 |
+ |
(TTAA)n |
Simple_repeat |
| scaffold8789 |
270632 |
270660 |
+ |
(AATTT)n |
Simple_repeat |
| scaffold8789 |
270711 |
270739 |
+ |
(AATTT)n |
Simple_repeat |
| scaffold8789 |
270782 |
270899 |
+ |
RS86 |
Unspecified |
| scaffold8789 |
271038 |
271080 |
+ |
(ATT)n |
Simple_repeat |
| scaffold8789 |
271252 |
271312 |
+ |
(TTTTA)n |
Simple_repeat |
| scaffold8789 |
271961 |
271997 |
+ |
(A)n |
Simple_repeat |
| scaffold8789 |
272080 |
272119 |
+ |
(A)n |
Simple_repeat |
| scaffold8789 |
273098 |
273264 |
+ |
RS324 |
Unspecified |
| scaffold8789 |
273516 |
273544 |
+ |
(ACA)n |
Simple_repeat |
| scaffold8789 |
273545 |
273652 |
+ |
(AAT)n |
Simple_repeat |
| scaffold8789 |
274345 |
274516 |
+ |
PL385 |
Unspecified |
| scaffold8789 |
274579 |
274602 |
+ |
(T)n |
Simple_repeat |
| scaffold8789 |
274723 |
274796 |
+ |
A-rich |
Low_complexity |
| scaffold8789 |
276067 |
276091 |
+ |
(TAA)n |
Simple_repeat |
| scaffold8789 |
276348 |
276367 |
+ |
(A)n |
Simple_repeat |
| scaffold8789 |
276805 |
276918 |
+ |
A-rich |
Low_complexity |
| scaffold8789 |
277338 |
277383 |
+ |
A-rich |
Low_complexity |
| scaffold8789 |
277412 |
277538 |
+ |
A-rich |
Low_complexity |
| scaffold8789 |
278729 |
278854 |
+ |
RS1568 |
Unspecified |
| scaffold8789 |
278996 |
279157 |
+ |
SHAMET |
DNA/TcMar-Stowaway |
| scaffold8789 |
279453 |
279590 |
+ |
PL184 |
Unspecified |
| scaffold8789 |
279595 |
279641 |
+ |
A-rich |
Low_complexity |
| scaffold8789 |
279789 |
280001 |
+ |
RS4 |
Unspecified |
| scaffold8789 |
280238 |
280273 |
+ |
(T)n |
Simple_repeat |
| scaffold8789 |
280476 |
280508 |
+ |
(T)n |
Simple_repeat |
| scaffold8789 |
280617 |
280645 |
+ |
(T)n |
Simple_repeat |
| scaffold8789 |
281243 |
281269 |
+ |
(CA)n |
Simple_repeat |
| scaffold8789 |
281316 |
281350 |
+ |
(TCT)n |
Simple_repeat |
| scaffold8789 |
281654 |
281688 |
+ |
(TTATAT)n |
Simple_repeat |
| scaffold8789 |
281872 |
281993 |
- |
RS11718 |
Unspecified |
| scaffold8789 |
282483 |
282575 |
+ |
RS1854 |
Unspecified |
| scaffold8789 |
282510 |
282681 |
+ |
RS17860 |
Unspecified |
| scaffold8789 |
285213 |
285234 |
+ |
(AACTAA)n |
Simple_repeat |
| scaffold8789 |
285235 |
285257 |
+ |
(ACT)n |
Simple_repeat |
| scaffold8789 |
285258 |
285272 |
+ |
(AACTAA)n |
Simple_repeat |
| scaffold8789 |
285273 |
285306 |
+ |
(A)n |
Simple_repeat |
| scaffold8789 |
285575 |
285672 |
+ |
A-rich |
Low_complexity |
| scaffold8789 |
285872 |
285929 |
+ |
GA-rich |
Low_complexity |
| scaffold8789 |
286012 |
286048 |
+ |
(T)n |
Simple_repeat |
| scaffold8789 |
286048 |
286073 |
+ |
(TAA)n |
Simple_repeat |
| scaffold8789 |
286073 |
286581 |
+ |
PL753 |
Unspecified |
| scaffold8789 |
287524 |
287587 |
+ |
A-rich |
Low_complexity |
| scaffold8789 |
287794 |
288068 |
- |
RS1 |
Unspecified |
| scaffold8789 |
288038 |
288086 |
+ |
(TAT)n |
Simple_repeat |
| scaffold8789 |
288067 |
288086 |
+ |
(TAT)n |
Simple_repeat |
| scaffold8789 |
288085 |
288544 |
+ |
PL352 |
Unspecified |
| scaffold8789 |
288561 |
288798 |
- |
RS4 |
Unspecified |
| scaffold8789 |
288824 |
289031 |
- |
RS18 |
Unspecified |
| scaffold8789 |
289227 |
289257 |
+ |
(T)n |
Simple_repeat |
| scaffold8789 |
289471 |
289567 |
- |
RS4475 |
Unspecified |
| scaffold8789 |
289591 |
289988 |
- |
RS468 |
Unspecified |
| scaffold8789 |
291104 |
291114 |
+ |
(TTTTTTG)n |
Simple_repeat |
| scaffold8789 |
291115 |
291136 |
+ |
(T)n |
Simple_repeat |
| scaffold8789 |
291249 |
291293 |
+ |
(ACATTT)n |
Simple_repeat |
| scaffold8789 |
294624 |
294721 |
- |
RS10840 |
Unspecified |
| scaffold8789 |
296083 |
296114 |
+ |
(AATAA)n |
Simple_repeat |
| scaffold8789 |
298282 |
298325 |
+ |
A-rich |
Low_complexity |
| scaffold8789 |
298460 |
298495 |
+ |
(GAA)n |
Simple_repeat |
| scaffold8789 |
298817 |
298898 |
+ |
(TTA)n |
Simple_repeat |
| scaffold8789 |
301213 |
301296 |
+ |
PL803 |
Unspecified |
| scaffold8789 |
301497 |
301573 |
+ |
RS3923 |
Unspecified |
| scaffold8789 |
302917 |
302950 |
+ |
A-rich |
Low_complexity |
| scaffold8789 |
303373 |
303418 |
+ |
(ACTTTT)n |
Simple_repeat |
| scaffold8789 |
303644 |
303903 |
+ |
RS736 |
Unspecified |
| scaffold8789 |
304737 |
304792 |
+ |
(GGTTTC)n |
Simple_repeat |
| scaffold8789 |
304812 |
304841 |
+ |
(TG)n |
Simple_repeat |
| scaffold8789 |
304934 |
304977 |
+ |
(AATTTT)n |
Simple_repeat |
| scaffold8789 |
305370 |
305407 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold8789 |
308331 |
308352 |
+ |
(GT)n |
Simple_repeat |
| scaffold8789 |
312016 |
312034 |
+ |
(T)n |
Simple_repeat |
| scaffold8789 |
315227 |
315562 |
+ |
RS600 |
Unspecified |
| scaffold8789 |
319366 |
319388 |
+ |
(T)n |
Simple_repeat |
| scaffold8789 |
320800 |
320885 |
+ |
EnSpm-34_SBi |
DNA/CMC-EnSpm |
| scaffold8789 |
325445 |
325618 |
- |
PL178 |
Unspecified |
| scaffold8789 |
325618 |
325790 |
+ |
PL352 |
Unspecified |
| scaffold8789 |
325803 |
325936 |
- |
PL533 |
Unspecified |
| scaffold8789 |
326577 |
326618 |
+ |
(ATTACT)n |
Simple_repeat |
| scaffold8789 |
327683 |
327812 |
- |
RS2016 |
Unspecified |
| scaffold8789 |
330114 |
330140 |
+ |
(A)n |
Simple_repeat |
| scaffold8789 |
335468 |
335484 |
+ |
(A)n |
Simple_repeat |
| scaffold8789 |
335729 |
335763 |
+ |
(CAACAT)n |
Simple_repeat |
| scaffold8789 |
335908 |
335945 |
+ |
(A)n |
Simple_repeat |
| scaffold8789 |
336526 |
336725 |
- |
RS4 |
Unspecified |
| scaffold8789 |
336748 |
336756 |
+ |
(TTAT)n |
Simple_repeat |
| scaffold8789 |
336757 |
336783 |
+ |
(T)n |
Simple_repeat |
| scaffold8789 |
336906 |
336935 |
+ |
(A)n |
Simple_repeat |
| scaffold8789 |
337115 |
337165 |
+ |
(CGC)n |
Simple_repeat |
| scaffold8789 |
337484 |
337537 |
+ |
(TTTAT)n |
Simple_repeat |
| scaffold8789 |
338763 |
338959 |
+ |
RS522 |
Unspecified |
| scaffold8789 |
340018 |
340127 |
- |
RS429 |
Unspecified |
| scaffold8789 |
341398 |
341618 |
+ |
RS522 |
Unspecified |
| scaffold8789 |
342557 |
342595 |
+ |
(TATTT)n |
Simple_repeat |
| scaffold8789 |
342595 |
342623 |
+ |
A-rich |
Low_complexity |
| scaffold8789 |
342680 |
342789 |
+ |
RS1625 |
Unspecified |
| scaffold8789 |
342842 |
342877 |
+ |
(TTTTA)n |
Simple_repeat |
| scaffold8789 |
342887 |
342964 |
+ |
(AATTAC)n |
Simple_repeat |
| scaffold8789 |
343013 |
343040 |
+ |
(A)n |
Simple_repeat |
| scaffold8789 |
343238 |
343400 |
- |
RS325 |
Unspecified |
| scaffold8789 |
343930 |
343958 |
+ |
(TTCTT)n |
Simple_repeat |
| scaffold8789 |
344048 |
344262 |
- |
RS11936 |
Unspecified |
| scaffold8789 |
344270 |
344313 |
+ |
(T)n |
Simple_repeat |
| scaffold8789 |
344411 |
344447 |
+ |
(TTTATTT)n |
Simple_repeat |
| scaffold8789 |
344774 |
344975 |
+ |
RS4164 |
Unspecified |
| scaffold8789 |
344983 |
345026 |
+ |
(TTATTT)n |
Simple_repeat |
| scaffold8789 |
345031 |
345309 |
- |
RS1919 |
Unspecified |
| scaffold8789 |
345568 |
345800 |
+ |
RS458 |
Unspecified |
| scaffold8789 |
345796 |
346050 |
- |
RS106 |
Unspecified |
| scaffold8789 |
346567 |
346601 |
+ |
(AATAAC)n |
Simple_repeat |
| scaffold8789 |
346617 |
347079 |
- |
PL307 |
Unspecified |
| scaffold8789 |
347418 |
347451 |
+ |
(AATA)n |
Simple_repeat |
| scaffold8789 |
348175 |
348199 |
+ |
(A)n |
Simple_repeat |
| scaffold8789 |
348508 |
348805 |
- |
RS513 |
Unspecified |
| scaffold8789 |
350879 |
350906 |
+ |
(AAAAT)n |
Simple_repeat |
| scaffold8789 |
351730 |
351762 |
+ |
A-rich |
Low_complexity |
| scaffold8789 |
352035 |
352053 |
+ |
(A)n |
Simple_repeat |
| scaffold8789 |
352117 |
352235 |
- |
RS12556 |
Unspecified |
| scaffold8789 |
352484 |
352680 |
- |
RS13272 |
Unspecified |
| scaffold8789 |
353059 |
353082 |
+ |
(AAG)n |
Simple_repeat |
| scaffold8789 |
353422 |
353449 |
+ |
(A)n |
Simple_repeat |
| scaffold8789 |
353635 |
353673 |
+ |
(TGAT)n |
Simple_repeat |
| scaffold8789 |
353894 |
353988 |
+ |
RS285 |
Unspecified |
| scaffold8789 |
354463 |
354717 |
- |
RS356 |
Unspecified |
| scaffold8789 |
355015 |
355051 |
+ |
(TTTTAT)n |
Simple_repeat |
| scaffold8789 |
355301 |
355328 |
+ |
(CTTT)n |
Simple_repeat |
| scaffold8789 |
355580 |
355614 |
+ |
A-rich |
Low_complexity |
| scaffold8789 |
355677 |
355720 |
+ |
(TCG)n |
Simple_repeat |
| scaffold8789 |
356656 |
356695 |
+ |
(GTCATT)n |
Simple_repeat |
| scaffold8789 |
358223 |
358619 |
- |
EnSpm-10_STu |
DNA/CMC-EnSpm |
| scaffold8789 |
359313 |
359333 |
+ |
(T)n |
Simple_repeat |
| scaffold8789 |
359743 |
359831 |
- |
LTR-7_Mad-LTR |
LTR |
| scaffold8789 |
360119 |
360149 |
+ |
(TATT)n |
Simple_repeat |
| scaffold8789 |
360412 |
360460 |
+ |
(AATTA)n |
Simple_repeat |