scaffold8839 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold8839 |
1 |
100 |
- |
RS189 |
Unspecified |
| scaffold8839 |
294 |
488 |
+ |
RS5895 |
Unspecified |
| scaffold8839 |
1060 |
1106 |
+ |
(TTATTGA)n |
Simple_repeat |
| scaffold8839 |
1616 |
1718 |
+ |
(AACTA)n |
Simple_repeat |
| scaffold8839 |
1774 |
1803 |
+ |
(TAA)n |
Simple_repeat |
| scaffold8839 |
1817 |
1853 |
+ |
(ACA)n |
Simple_repeat |
| scaffold8839 |
3819 |
3954 |
+ |
(CAATCAA)n |
Simple_repeat |
| scaffold8839 |
6221 |
6328 |
+ |
RS14048 |
Unspecified |
| scaffold8839 |
6528 |
6663 |
+ |
RS12245 |
Unspecified |
| scaffold8839 |
6716 |
6858 |
+ |
RS5584 |
Unspecified |
| scaffold8839 |
6754 |
6884 |
- |
RS9071 |
Unspecified |
| scaffold8839 |
6962 |
7344 |
+ |
RS3738 |
Unspecified |
| scaffold8839 |
7697 |
7851 |
+ |
(TATAACA)n |
Simple_repeat |
| scaffold8839 |
8671 |
8722 |
+ |
(TATTTAA)n |
Simple_repeat |
| scaffold8839 |
8919 |
8987 |
+ |
A-rich |
Low_complexity |
| scaffold8839 |
9187 |
9268 |
+ |
COP14_I_MT-int |
LTR/Copia |
| scaffold8839 |
9200 |
9469 |
+ |
Gypsy-72-LTR_ZM |
LTR/Gypsy |
| scaffold8839 |
9200 |
9310 |
+ |
Gypsy-72-LTR_ZM |
LTR/Gypsy |
| scaffold8839 |
9282 |
9469 |
+ |
RS6457 |
Unspecified |
| scaffold8839 |
9308 |
9467 |
+ |
RS875 |
Unspecified |
| scaffold8839 |
10811 |
10865 |
+ |
(AATA)n |
Simple_repeat |
| scaffold8839 |
11255 |
11305 |
+ |
(TA)n |
Simple_repeat |
| scaffold8839 |
12613 |
12653 |
+ |
(AAGATT)n |
Simple_repeat |
| scaffold8839 |
12662 |
12769 |
+ |
RS3738 |
Unspecified |
| scaffold8839 |
12894 |
13364 |
- |
RS4570 |
Unspecified |
| scaffold8839 |
13376 |
13577 |
+ |
RS2407 |
Unspecified |
| scaffold8839 |
13593 |
13957 |
- |
RS8 |
Unspecified |
| scaffold8839 |
13971 |
14388 |
- |
RS1254 |
Unspecified |
| scaffold8839 |
14880 |
14924 |
+ |
(AACCAAC)n |
Simple_repeat |
| scaffold8839 |
16540 |
16625 |
- |
Gypsy-78_PTr-I |
LTR/Gypsy |
| scaffold8839 |
17075 |
17120 |
+ |
(CATAT)n |
Simple_repeat |
| scaffold8839 |
17636 |
17738 |
+ |
ATHAT2 |
DNA/hAT-Ac |
| scaffold8839 |
18120 |
18435 |
+ |
A-rich |
Low_complexity |
| scaffold8839 |
18120 |
18239 |
+ |
A-rich |
Low_complexity |
| scaffold8839 |
18180 |
18435 |
+ |
RS14228 |
Unspecified |
| scaffold8839 |
18667 |
18713 |
+ |
(TTGTTTT)n |
Simple_repeat |
| scaffold8839 |
20337 |
20592 |
+ |
RS5450 |
Unspecified |
| scaffold8839 |
20622 |
20666 |
+ |
RS5450 |
Unspecified |
| scaffold8839 |
20706 |
20884 |
+ |
RS10038 |
Unspecified |
| scaffold8839 |
20933 |
20970 |
+ |
RS10038 |
Unspecified |
| scaffold8839 |
21894 |
21925 |
+ |
(T)n |
Simple_repeat |
| scaffold8839 |
23829 |
23867 |
+ |
(TATA)n |
Simple_repeat |
| scaffold8839 |
23945 |
25599 |
- |
RS658 |
Unspecified |
| scaffold8839 |
25883 |
25943 |
+ |
PL759 |
Unspecified |
| scaffold8839 |
27785 |
27816 |
+ |
(TCC)n |
Simple_repeat |
| scaffold8839 |
28097 |
28442 |
- |
Gypsy-185_ZM-I |
LTR/Gypsy |
| scaffold8839 |
29521 |
29624 |
+ |
RS13952 |
Unspecified |
| scaffold8839 |
30819 |
30866 |
+ |
A-rich |
Low_complexity |
| scaffold8839 |
31379 |
31510 |
+ |
(CCCGA)n |
Simple_repeat |
| scaffold8839 |
31668 |
31794 |
+ |
(CCCGA)n |
Simple_repeat |
| scaffold8839 |
31801 |
32097 |
- |
RS37 |
Unspecified |
| scaffold8839 |
32141 |
32295 |
- |
RS3750 |
Unspecified |
| scaffold8839 |
32421 |
32763 |
- |
RS11196 |
Unspecified |
| scaffold8839 |
32943 |
32975 |
+ |
GA-rich |
Low_complexity |
| scaffold8839 |
33192 |
33255 |
- |
Gypsy-13_TA-I |
LTR/Gypsy |
| scaffold8839 |
33726 |
33757 |
+ |
(CATAT)n |
Simple_repeat |
| scaffold8839 |
33938 |
34216 |
+ |
RS303 |
Unspecified |
| scaffold8839 |
34213 |
34817 |
+ |
RS699 |
Unspecified |
| scaffold8839 |
34826 |
34865 |
+ |
Gypsy-133_GM-I |
LTR/Gypsy |
| scaffold8839 |
34866 |
34925 |
- |
Gypsy2-I_MT |
LTR/Gypsy |
| scaffold8839 |
35015 |
35134 |
+ |
A-rich |
Low_complexity |
| scaffold8839 |
35337 |
35376 |
+ |
(CATTT)n |
Simple_repeat |
| scaffold8839 |
35601 |
35674 |
- |
Gypsy-13_TA-I |
LTR/Gypsy |
| scaffold8839 |
36216 |
36255 |
+ |
(T)n |
Simple_repeat |
| scaffold8839 |
36837 |
37242 |
+ |
RS2079 |
Unspecified |
| scaffold8839 |
37143 |
37258 |
+ |
RS11629 |
Unspecified |
| scaffold8839 |
37574 |
37716 |
+ |
(TCGGG)n |
Simple_repeat |
| scaffold8839 |
37740 |
38127 |
- |
RS539 |
Unspecified |
| scaffold8839 |
38254 |
38536 |
+ |
(ATA)n |
Simple_repeat |
| scaffold8839 |
38254 |
38317 |
+ |
(ATA)n |
Simple_repeat |
| scaffold8839 |
38288 |
38536 |
+ |
PL619 |
Unspecified |
| scaffold8839 |
38534 |
38609 |
- |
RS15121 |
Unspecified |
| scaffold8839 |
38606 |
38664 |
+ |
RS1587 |
Unspecified |
| scaffold8839 |
39022 |
39468 |
+ |
RS2965 |
Unspecified |
| scaffold8839 |
39548 |
39581 |
+ |
(ATGATG)n |
Simple_repeat |
| scaffold8839 |
39961 |
39992 |
+ |
(TTA)n |
Simple_repeat |
| scaffold8839 |
41368 |
42846 |
- |
MuDR_A_B |
MuDR_A_B(TransposonPSI) |
| scaffold8839 |
41745 |
42696 |
- |
MuDR-2_Mad |
DNA/MULE-MuDR |
| scaffold8839 |
43945 |
44200 |
+ |
RS6965 |
Unspecified |
| scaffold8839 |
44237 |
45143 |
- |
Harbinger1_PTr |
DNA/PIF-Harbinger |
| scaffold8839 |
45200 |
45349 |
+ |
RS10556 |
Unspecified |
| scaffold8839 |
45707 |
45990 |
+ |
RS8379 |
Unspecified |
| scaffold8839 |
46036 |
46734 |
+ |
RS3671 |
Unspecified |
| scaffold8839 |
46814 |
47419 |
+ |
RS13047 |
Unspecified |
| scaffold8839 |
46899 |
47457 |
+ |
RS10051 |
Unspecified |
| scaffold8839 |
47582 |
47616 |
+ |
(T)n |
Simple_repeat |
| scaffold8839 |
47697 |
47786 |
+ |
A-rich |
Low_complexity |
| scaffold8839 |
47972 |
48090 |
+ |
RS1587 |
Unspecified |
| scaffold8839 |
48124 |
48174 |
+ |
(AATT)n |
Simple_repeat |
| scaffold8839 |
48816 |
48849 |
+ |
(ATT)n |
Simple_repeat |
| scaffold8839 |
49448 |
49582 |
+ |
(TAA)n |
Simple_repeat |
| scaffold8839 |
49673 |
49700 |
- |
EnSpm2_PTr |
DNA/CMC-EnSpm |
| scaffold8839 |
49701 |
49773 |
+ |
RLG_scMaximus_1_5-I |
LTR/Copia |
| scaffold8839 |
51977 |
52021 |
+ |
(ATATC)n |
Simple_repeat |
| scaffold8839 |
53560 |
53606 |
+ |
(GGTTTT)n |
Simple_repeat |
| scaffold8839 |
54087 |
54113 |
+ |
Gypsy-16_Mad-I |
LTR/Gypsy |
| scaffold8839 |
54120 |
54162 |
+ |
(TTTG)n |
Simple_repeat |
| scaffold8839 |
56188 |
56250 |
+ |
GA-rich |
Low_complexity |
| scaffold8839 |
56747 |
56883 |
- |
Copia25-PTR_I-int |
LTR/Copia |
| scaffold8839 |
61242 |
61442 |
+ |
PL252 |
Unspecified |
| scaffold8839 |
61476 |
61588 |
+ |
L1-5_STu |
LINE/L1 |