scaffold8851 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold8851 |
1 |
1113 |
+ |
RS108 |
Unspecified |
| scaffold8851 |
3701 |
3918 |
- |
PL670 |
Unspecified |
| scaffold8851 |
3921 |
4088 |
+ |
cacta |
cacta(TransposonPSI) |
| scaffold8851 |
4165 |
4433 |
+ |
LTR2-ZM_LTR |
LTR |
| scaffold8851 |
4434 |
5843 |
+ |
EnSpm-2_GM |
DNA/CMC-EnSpm |
| scaffold8851 |
6229 |
6295 |
+ |
(ATTTCAT)n |
Simple_repeat |
| scaffold8851 |
6418 |
6438 |
+ |
(A)n |
Simple_repeat |
| scaffold8851 |
7174 |
7200 |
+ |
(GATG)n |
Simple_repeat |
| scaffold8851 |
7204 |
7249 |
+ |
(CATC)n |
Simple_repeat |
| scaffold8851 |
9622 |
11091 |
+ |
hAT |
hAT(TransposonPSI) |
| scaffold8851 |
10037 |
10963 |
+ |
HAT-9_Mad |
DNA/hAT-Ac |
| scaffold8851 |
11136 |
11299 |
+ |
Copia-4_SL-I |
LTR/Copia |
| scaffold8851 |
11430 |
11609 |
+ |
HAT-9_Mad |
DNA/hAT-Ac |
| scaffold8851 |
12207 |
12240 |
+ |
A-rich |
Low_complexity |
| scaffold8851 |
13521 |
14543 |
+ |
MuDR_A_B |
MuDR_A_B(TransposonPSI) |
| scaffold8851 |
14054 |
14496 |
+ |
MuDR-7_VV |
DNA/MULE-MuDR |
| scaffold8851 |
14614 |
15573 |
+ |
MuDR_A_B |
MuDR_A_B(TransposonPSI) |
| scaffold8851 |
14631 |
15254 |
+ |
MuDR-7_VV |
DNA/MULE-MuDR |
| scaffold8851 |
16955 |
17209 |
- |
RS1048 |
Unspecified |
| scaffold8851 |
17380 |
17415 |
+ |
(TTTGTGA)n |
Simple_repeat |
| scaffold8851 |
17570 |
17783 |
- |
RS3386 |
Unspecified |
| scaffold8851 |
17897 |
20010 |
+ |
HATOS1 |
DNA/hAT-Tip100 |
| scaffold8851 |
20162 |
20338 |
+ |
HAT-9_Mad |
DNA/hAT-Ac |
| scaffold8851 |
20944 |
21012 |
+ |
(A)n |
Simple_repeat |
| scaffold8851 |
21065 |
21153 |
+ |
(A)n |
Simple_repeat |
| scaffold8851 |
21183 |
21463 |
+ |
(TCGGG)n |
Simple_repeat |
| scaffold8851 |
21644 |
21665 |
+ |
(T)n |
Simple_repeat |
| scaffold8851 |
21703 |
22184 |
+ |
Copia-52_BRa-I |
LTR/Copia |
| scaffold8851 |
22187 |
22859 |
- |
RS2725 |
Unspecified |
| scaffold8851 |
22858 |
23296 |
+ |
RS2758 |
Unspecified |
| scaffold8851 |
23292 |
23912 |
+ |
RS1496 |
Unspecified |
| scaffold8851 |
23791 |
24000 |
- |
RS7985 |
Unspecified |
| scaffold8851 |
24022 |
24166 |
+ |
RS730 |
Unspecified |
| scaffold8851 |
24155 |
25392 |
+ |
RS730 |
Unspecified |
| scaffold8851 |
26006 |
26093 |
+ |
A-rich |
Low_complexity |
| scaffold8851 |
26418 |
27202 |
- |
RS437 |
Unspecified |
| scaffold8851 |
26615 |
27616 |
- |
RS1381 |
Unspecified |
| scaffold8851 |
27213 |
28235 |
- |
RS166 |
Unspecified |
| scaffold8851 |
27923 |
28713 |
+ |
RS225 |
Unspecified |
| scaffold8851 |
28394 |
29230 |
+ |
RS44 |
Unspecified |
| scaffold8851 |
29329 |
29363 |
+ |
(AGCACA)n |
Simple_repeat |
| scaffold8851 |
31278 |
31589 |
+ |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold8851 |
31311 |
31585 |
+ |
Copia-32-I_VV |
LTR/Copia |
| scaffold8851 |
31759 |
32124 |
- |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold8851 |
32292 |
32346 |
+ |
(GTTTT)n |
Simple_repeat |
| scaffold8851 |
32494 |
32532 |
+ |
A-rich |
Low_complexity |
| scaffold8851 |
32774 |
32820 |
+ |
A-rich |
Low_complexity |
| scaffold8851 |
33281 |
33412 |
+ |
RS1496 |
Unspecified |
| scaffold8851 |
33629 |
33661 |
+ |
A-rich |
Low_complexity |
| scaffold8851 |
33664 |
33704 |
+ |
(GATGAAT)n |
Simple_repeat |
| scaffold8851 |
33823 |
33864 |
+ |
(TTATAAG)n |
Simple_repeat |
| scaffold8851 |
34070 |
34123 |
+ |
(TCATC)n |
Simple_repeat |
| scaffold8851 |
34150 |
34203 |
+ |
(AAT)n |
Simple_repeat |
| scaffold8851 |
34345 |
34447 |
+ |
(TTA)n |
Simple_repeat |
| scaffold8851 |
34506 |
34529 |
+ |
(AAAT)n |
Simple_repeat |
| scaffold8851 |
35088 |
35222 |
- |
RS9938 |
Unspecified |
| scaffold8851 |
35314 |
35463 |
+ |
RS5222 |
Unspecified |
| scaffold8851 |
35416 |
35543 |
- |
RS9301 |
Unspecified |
| scaffold8851 |
35677 |
35706 |
+ |
(TAA)n |
Simple_repeat |
| scaffold8851 |
35962 |
36394 |
+ |
RS304 |
Unspecified |
| scaffold8851 |
36104 |
36533 |
+ |
RS975 |
Unspecified |
| scaffold8851 |
36636 |
36676 |
+ |
(GTA)n |
Simple_repeat |
| scaffold8851 |
36903 |
36937 |
+ |
(TATT)n |
Simple_repeat |
| scaffold8851 |
37397 |
37457 |
+ |
GA-rich |
Low_complexity |
| scaffold8851 |
37668 |
37767 |
+ |
(TA)n |
Simple_repeat |
| scaffold8851 |
38388 |
38596 |
- |
RS3768 |
Unspecified |
| scaffold8851 |
39001 |
40404 |
- |
LINE |
LINE(TransposonPSI) |
| scaffold8851 |
39408 |
40204 |
- |
SHALINE10_MT |
LINE/L1 |
| scaffold8851 |
43275 |
43543 |
- |
RS666 |
Unspecified |
| scaffold8851 |
44634 |
44837 |
- |
RS4100 |
Unspecified |
| scaffold8851 |
44902 |
45032 |
- |
RS4058 |
Unspecified |
| scaffold8851 |
45101 |
45374 |
- |
RS8320 |
Unspecified |
| scaffold8851 |
45572 |
45612 |
+ |
(GTA)n |
Simple_repeat |
| scaffold8851 |
45709 |
45729 |
+ |
(T)n |
Simple_repeat |
| scaffold8851 |
45866 |
45904 |
+ |
(TTATTAG)n |
Simple_repeat |
| scaffold8851 |
46981 |
47256 |
- |
RS616 |
Unspecified |
| scaffold8851 |
47079 |
47611 |
+ |
PL880 |
Unspecified |
| scaffold8851 |
48971 |
49428 |
+ |
MEGY-I_MT |
LTR/Gypsy |
| scaffold8851 |
49415 |
50070 |
- |
RS1819 |
Unspecified |
| scaffold8851 |
50188 |
50207 |
+ |
(GCCG)n |
Simple_repeat |
| scaffold8851 |
50248 |
50701 |
+ |
PL78 |
Unspecified |
| scaffold8851 |
51060 |
51109 |
+ |
(A)n |
Simple_repeat |
| scaffold8851 |
51352 |
51394 |
+ |
MEGY-I_MT |
LTR/Gypsy |
| scaffold8851 |
52664 |
52699 |
+ |
GA-rich |
Low_complexity |
| scaffold8851 |
53308 |
53329 |
+ |
(A)n |
Simple_repeat |
| scaffold8851 |
59737 |
60651 |
- |
LINE |
LINE(TransposonPSI) |
| scaffold8851 |
59826 |
60321 |
- |
L1-15_GM |
LINE/L1 |
| scaffold8851 |
60353 |
60619 |
- |
L1-1_PTr |
LINE/L1 |
| scaffold8851 |
62911 |
62940 |
+ |
(CCCAGA)n |
Simple_repeat |
| scaffold8851 |
63111 |
63710 |
- |
RS688 |
Unspecified |
| scaffold8851 |
64216 |
64881 |
- |
Copia-84_BRa-I |
LTR/Copia |
| scaffold8851 |
64881 |
64994 |
- |
RS64 |
Unspecified |
| scaffold8851 |
65586 |
65639 |
+ |
(TGT)n |
Simple_repeat |
| scaffold8851 |
65882 |
65936 |
+ |
(TTGGTT)n |
Simple_repeat |
| scaffold8851 |
66587 |
66641 |
+ |
(TTGGTT)n |
Simple_repeat |
| scaffold8851 |
66830 |
69649 |
- |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold8851 |
66840 |
67801 |
- |
Copia-71_VV-I |
LTR/Copia |
| scaffold8851 |
68142 |
69426 |
- |
Copia-71_VV-I |
LTR/Copia |
| scaffold8851 |
69713 |
69902 |
- |
Copia-71_VV-I |
LTR/Copia |
| scaffold8851 |
71143 |
71241 |
+ |
A-rich |
Low_complexity |
| scaffold8851 |
71143 |
71478 |
+ |
A-rich |
Low_complexity |
| scaffold8851 |
71217 |
71478 |
+ |
PL226 |
Unspecified |
| scaffold8851 |
71248 |
71636 |
+ |
RS1279 |
Unspecified |
| scaffold8851 |
71699 |
71745 |
+ |
(T)n |
Simple_repeat |
| scaffold8851 |
72937 |
73048 |
- |
RS882 |
Unspecified |
| scaffold8851 |
72937 |
73062 |
- |
RS354 |
Unspecified |
| scaffold8851 |
73071 |
73266 |
+ |
RS3394 |
Unspecified |
| scaffold8851 |
73380 |
73409 |
+ |
(A)n |
Simple_repeat |
| scaffold8851 |
74621 |
74651 |
+ |
(CAG)n |
Simple_repeat |
| scaffold8851 |
79927 |
80349 |
- |
RS458 |
Unspecified |
| scaffold8851 |
81153 |
81237 |
+ |
HADES_TA |
DNA/TcMar-Stowaway |